Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ydiF [H]
Identifier: 49183250
GI number: 49183250
Start: 216439
End: 218319
Strand: Direct
Name: ydiF [H]
Synonym: BAS0217
Alternate gene names: 49183250
Gene position: 216439-218319 (Clockwise)
Preceding gene: 49183249
Following gene: 49183251
Centisome position: 4.14
GC content: 36.42
Gene sequence:
>1881_bases ATGACAATTTGTAGTGTAAATAATGTAACGAAATCTTTTGGTGGAAACATCATATTTGAAAATATATCGCTTGAAATAAA GAATGGTGAACGTGTTGGATTAGTTGGTCGTAACGGTAGCGGGAAGACAACAATCTTTCAGCTTTTAACTGGAATGGAAA GTTTGGATGCAGGGGCCATTCATATGAAGAAAGGTACACGTATTGGTCATGTGGCACAAATTCCGAAATTTGATGAGAGT ATGACTGTATATGAAGTATTGAGTTCCGCTTTTAAAATAGAAAAGGAATTAGAAAGAGAAATGCGTACTTTAGAAAAAGA TATGGCGGAAGAACAGGAATCTTCTGTTTTACAAAAATTAATGGAAAGATACGGAATCATCCAAGAAAAGTTTGCGTTTC TTGGTGGTTATGAAATCGAAGCGAACATTATGAAGGTAGCAAATGGTTTACAGGTGACAGAACTATTCCCTCGTTCATTT TTAGAGCTAAGTGGTGGGGAACAAACAAAAGTAAGCCTTGCATACATGCTGTTGCAGAAACCAGATTTACTTTTATTAGA TGAACCAACCAATCATTTAGATTTATTTGCCGTAGAATGGTTAGAGCAATTTTTAAAAGAATATAACGGAACGGTTATGG TTATTTCACATGACCGCTATTTCCTTGATGAAGTTGTAACGAAGATTTTTGATTTAGAAGATGGAGAGATTCACGTGTAT CATACAAACTATTCTCGGTTTGTTGAAGAGAAGGAAGAAAGGTTGCTTCAGGAGTTTCAAGCTTATCAAGAACAGCAAAA GAAAATAAAGAAAATGAAAGAAGCAATTAAGCGACTACGTGAATGGGCAAATCAGGCGAATCCTCCGAATGAAGGATTGC ATAAGAGAGCAAGAAGTATGGAGCGTGCACTGGAACGTATGCAAAAACTAAAGAAACCTATTTTAGAACGAAAACAAATA GGACTTCAGTTTGAAGGACAAGATAGAAGTGGAAAAGATGTTGTTGTAATAAAAGAAGTGAGTAAAGGGTTTGCTGACCA CCCCTTATTTAACGAAGTGAATTTACATGTTCGTTTTCAAGAGCGCGCGGCCATCGTTGGTCGTAATGGTACAGGAAAGA CAACGCTATTAAAGTTGTTATTAGAAGAAATAGAACCAGACGCGGGAGAAATTAGAATTGGTAGTAGTGTGAAAATCGGT TATTTATCCCAGCATGCGTACGGAAATATGAAAAGTGATGTATTGGAGGCTTTCAGGGAATATGTAGCTGTCACAGAGGG AGAAGCGAGACATATATTAGCTAAGTTTTTATTTTATGGCCCAGCGGTGTTTAAGAAAGTAACACAACTGAGCGGTGGAG AAAAAATGAGGTTAAGACTTGCGCAACTTATGTATCAAGATATCAATTTTTTAATTTTAGATGAGCCGACAAACCATCTC GACATTGAATCAAGGGAAGTTTTAGAGGAAGCTCTTGAACAATATAATGGGACGATTTTAGCTGTTTCACATGATCGTTA TTTTTTAAATAAGTTATTTGAAAAGACGTATTGGATTGATGAGCATAAATTATTTGAGTTTGCAGGAAACTATGCATGGG CGCGTCAAAAGTGGGAGGAAAGGCTCGAGACGCAAGTAATAAAGCAGCAACGCCAAGGAAGAAAAAGTATTGAAACAGCC CCTGTAAAAAAGAAAGAAGCTAGGAATATTGAGGAGATTGAAACCGAGTTAATGCATGTAGAAGAAGATATATATACGCT TGAGTGTACAATGGAACATGTAGTTGATATTAAAAGGCTTGAACAATTATATGAAGAAAAAACGAAGAAAGAGTTGTTAC GAGCGGAACTATATAATGAGTTAGAGAATATTGTGGAGTGA
Upstream 100 bases:
>100_bases CACGTGTGAAAAGGGAGCTATTTAGCTTCCTTTTTCTATGTCGAAAACCATGGGGAATGTTTCTTTCCCATGGTTTTTTA TATTGAAAGGAGTACGGAAA
Downstream 100 bases:
>100_bases AAAATGAAAAGCGAATTCTTTCAGTTTTACTGAAGGATTCGCTTTTTTATACTGCTATTTTGCTTTAAGAGATAAATAAA GTTGTGTTTCACGTGAAACA
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 626; Mature: 625
Protein sequence:
>626_residues MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDES MTVYEVLSSAFKIEKELEREMRTLEKDMAEEQESSVLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSF LELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY HTNYSRFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSMERALERMQKLKKPILERKQI GLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIRIGSSVKIG YLSQHAYGNMKSDVLEAFREYVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHKLFEFAGNYAWARQKWEERLETQVIKQQRQGRKSIETA PVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKRLEQLYEEKTKKELLRAELYNELENIVE
Sequences:
>Translated_626_residues MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDES MTVYEVLSSAFKIEKELEREMRTLEKDMAEEQESSVLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSF LELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY HTNYSRFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSMERALERMQKLKKPILERKQI GLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIRIGSSVKIG YLSQHAYGNMKSDVLEAFREYVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHKLFEFAGNYAWARQKWEERLETQVIKQQRQGRKSIETA PVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKRLEQLYEEKTKKELLRAELYNELENIVE >Mature_625_residues TICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDESM TVYEVLSSAFKIEKELEREMRTLEKDMAEEQESSVLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSFL ELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVYH TNYSRFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSMERALERMQKLKKPILERKQIG LQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIRIGSSVKIGY LSQHAYGNMKSDVLEAFREYVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHLD IESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHKLFEFAGNYAWARQKWEERLETQVIKQQRQGRKSIETAP VKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKRLEQLYEEKTKKELLRAELYNELENIVE
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=522, Percent_Identity=32.183908045977, Blast_Score=256, Evalue=7e-68, Organism=Homo sapiens, GI27881506, Length=556, Percent_Identity=30.5755395683453, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI10947137, Length=556, Percent_Identity=30.5755395683453, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI10947135, Length=528, Percent_Identity=31.25, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI69354671, Length=528, Percent_Identity=31.25, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI156105685, Length=233, Percent_Identity=29.1845493562232, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI255708477, Length=193, Percent_Identity=30.5699481865285, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI90421313, Length=155, Percent_Identity=26.4516129032258, Blast_Score=67, Evalue=7e-11, Organism=Escherichia coli, GI1789751, Length=611, Percent_Identity=31.9148936170213, Blast_Score=299, Evalue=4e-82, Organism=Escherichia coli, GI1787041, Length=537, Percent_Identity=34.0782122905028, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI2367384, Length=529, Percent_Identity=32.5141776937618, Blast_Score=269, Evalue=5e-73, Organism=Escherichia coli, GI1787182, Length=553, Percent_Identity=33.6347197106691, Blast_Score=260, Evalue=2e-70, Organism=Escherichia coli, GI1788225, Length=265, Percent_Identity=25.6603773584906, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1788165, Length=210, Percent_Identity=25.7142857142857, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1789593, Length=233, Percent_Identity=26.1802575107296, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI87081791, Length=218, Percent_Identity=27.0642201834862, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=25, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI48994997, Length=246, Percent_Identity=24.390243902439, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786872, Length=266, Percent_Identity=26.6917293233083, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1786803, Length=233, Percent_Identity=24.4635193133047, Blast_Score=66, Evalue=9e-12, Organism=Escherichia coli, GI1786345, Length=186, Percent_Identity=30.6451612903226, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17559834, Length=534, Percent_Identity=30.1498127340824, Blast_Score=234, Evalue=9e-62, Organism=Caenorhabditis elegans, GI17555318, Length=562, Percent_Identity=30.4270462633452, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17553372, Length=523, Percent_Identity=33.6520076481836, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI193208177, Length=202, Percent_Identity=27.7227722772277, Blast_Score=74, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6321121, Length=536, Percent_Identity=33.0223880597015, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6320874, Length=536, Percent_Identity=28.9179104477612, Blast_Score=225, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6325030, Length=403, Percent_Identity=26.7990074441687, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6324314, Length=412, Percent_Identity=25.9708737864078, Blast_Score=134, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6323278, Length=416, Percent_Identity=25, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6323217, Length=200, Percent_Identity=28, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24666836, Length=531, Percent_Identity=32.391713747646, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24642252, Length=535, Percent_Identity=31.214953271028, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI18859989, Length=535, Percent_Identity=31.214953271028, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24641342, Length=562, Percent_Identity=32.5622775800712, Blast_Score=229, Evalue=5e-60, Organism=Drosophila melanogaster, GI281363262, Length=189, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24653245, Length=189, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI17136662, Length=187, Percent_Identity=28.3422459893048, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24659289, Length=182, Percent_Identity=27.4725274725275, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI62484234, Length=156, Percent_Identity=29.4871794871795, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 72695; Mature: 72564
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAI CEEECCCHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCE HMKKGTRIGHVAQIPKFDESMTVYEVLSSAFKIEKELEREMRTLEKDMAEEQESSVLQKL EECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSFLELSGGEQTKVSLAYMLLQK HHHHCCHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC PDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY CCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEE HTNYSRFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSM ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ERALERMQKLKKPILERKQIGLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQ HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEEE ERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIRIGSSVKIGYLSQHAYGNMKSDVLEAFRE CCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEHHHHCCCHHHHHHHHHHH YVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCC DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHKLFEFAGNYAWARQKWEE CCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH RLETQVIKQQRQGRKSIETAPVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKRL HHHHHHHHHHHHCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHH EQLYEEKTKKELLRAELYNELENIVE HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAI EEECCCHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCE HMKKGTRIGHVAQIPKFDESMTVYEVLSSAFKIEKELEREMRTLEKDMAEEQESSVLQKL EECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSFLELSGGEQTKVSLAYMLLQK HHHHCCHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC PDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY CCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEE HTNYSRFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSM ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ERALERMQKLKKPILERKQIGLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQ HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEEE ERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIRIGSSVKIGYLSQHAYGNMKSDVLEAFRE CCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEHHHHCCCHHHHHHHHHHH YVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCC DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHKLFEFAGNYAWARQKWEE CCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH RLETQVIKQQRQGRKSIETAPVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKRL HHHHHHHHHHHHCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHH EQLYEEKTKKELLRAELYNELENIVE HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]