Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ybfP [H]
Identifier: 49183225
GI number: 49183225
Start: 191782
End: 192681
Strand: Direct
Name: ybfP [H]
Synonym: BAS0192
Alternate gene names: 49183225
Gene position: 191782-192681 (Clockwise)
Preceding gene: 49183223
Following gene: 49183226
Centisome position: 3.67
GC content: 36.0
Gene sequence:
>900_bases ATGCATGAAGAATATAAAGAGATGATAAAAAAAGCTATTGAATATATAGAGAATCACTTACATGAGGAGCTTACAACAGA AAGAGTAGCATCTCACAGTGCAGTATCGATGTATCATTTTCATCGTATTTTTCAAAGGTATATTGGGATGAGTGTAACGG ATTATATTCGAAAGAGAAGGTTAACTCATGCTGCGCAGGTTTTAGTGTCGACCGAGAGAGCTGTTATTGATATTGCGATG CAATATGGTTTTTCCTCACAAGAGGCGTTTACGAGAGCTTTTAAAAGAATGTTTCAATTGCCACCAAAGAAATATCGAAA GTACTTCCAGTCATTTTATATAGAAAGAGAGGGTGTTTCAATGCAAAAGGGTATACCGAAAGGATGGATCTTAAGTGGAA GTCATCCTGCTGAATATGAGATGGGTTTAGATTATGAAGTTGTCCATCAAGGGAAGGTATCTGCATACATAAAAGCAAAA GAGAATGTTACGCACGGAGGATTTTCAACATTAATGCAAATGTTCCGAGCAGATAAATATGTAGGGAAGAGATTACGTTT TACAGCATTTGTTAAGAGTGAAAATGTAAGAGATTGGGCAGGATTGTGGATGCGAGTAGACGGAAAAGAGACAGAACCGT TTGCTATGGATAATATGCAAAATCGTCCCATTAAAAATACGAATAATTGGCAATCGTACTCGGTTGTATTAGATATAAAA GAAGGAGCGCTTGGTATTGCATTTGGTGTTTTATTATCAGGAGAAGGTTGTGTGTGGCTAGATAGTATTCGATTTGATGA AGTAGATGAAAAAATTCCTACAACAGATTTGGCAGAGAACTTTTATGAAACACTTTTAGAAGAACCGGTGAATCTACAAT TTGAAGAAGTAGAAAAATAA
Upstream 100 bases:
>100_bases AAAATAAATTATTATCCTGTAGCTACAAGGGTTAATCCGCAATTTAAATCAAAAAAATTTGTATGTATATGGTAAATTTA AATTGTGAGGAGGGACTAAA
Downstream 100 bases:
>100_bases AAAACAAGGAGAAAAGATATGCTCAAATATGTAAAACTAATAAGTATTAGTTTAGTAATATCGTCTTGCATTATGGGAAT TAATTATTTAGTTAGCTATA
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MHEEYKEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIFQRYIGMSVTDYIRKRRLTHAAQVLVSTERAVIDIAM QYGFSSQEAFTRAFKRMFQLPPKKYRKYFQSFYIEREGVSMQKGIPKGWILSGSHPAEYEMGLDYEVVHQGKVSAYIKAK ENVTHGGFSTLMQMFRADKYVGKRLRFTAFVKSENVRDWAGLWMRVDGKETEPFAMDNMQNRPIKNTNNWQSYSVVLDIK EGALGIAFGVLLSGEGCVWLDSIRFDEVDEKIPTTDLAENFYETLLEEPVNLQFEEVEK
Sequences:
>Translated_299_residues MHEEYKEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIFQRYIGMSVTDYIRKRRLTHAAQVLVSTERAVIDIAM QYGFSSQEAFTRAFKRMFQLPPKKYRKYFQSFYIEREGVSMQKGIPKGWILSGSHPAEYEMGLDYEVVHQGKVSAYIKAK ENVTHGGFSTLMQMFRADKYVGKRLRFTAFVKSENVRDWAGLWMRVDGKETEPFAMDNMQNRPIKNTNNWQSYSVVLDIK EGALGIAFGVLLSGEGCVWLDSIRFDEVDEKIPTTDLAENFYETLLEEPVNLQFEEVEK >Mature_299_residues MHEEYKEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIFQRYIGMSVTDYIRKRRLTHAAQVLVSTERAVIDIAM QYGFSSQEAFTRAFKRMFQLPPKKYRKYFQSFYIEREGVSMQKGIPKGWILSGSHPAEYEMGLDYEVVHQGKVSAYIKAK ENVTHGGFSTLMQMFRADKYVGKRLRFTAFVKSENVRDWAGLWMRVDGKETEPFAMDNMQNRPIKNTNNWQSYSVVLDIK EGALGIAFGVLLSGEGCVWLDSIRFDEVDEKIPTTDLAENFYETLLEEPVNLQFEEVEK
Specific function: Probable transcriptional regulator [H]
COG id: COG2207
COG function: function code K; AraC-type DNA-binding domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790857, Length=100, Percent_Identity=40, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI87081928, Length=98, Percent_Identity=38.7755102040816, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790497, Length=102, Percent_Identity=38.2352941176471, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018060 [H]
Pfam domain/function: PF00165 HTH_AraC [H]
EC number: NA
Molecular weight: Translated: 34907; Mature: 34907
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEEYKEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIFQRYIGMSVTDYIRKRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LTHAAQVLVSTERAVIDIAMQYGFSSQEAFTRAFKRMFQLPPKKYRKYFQSFYIEREGVS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC MQKGIPKGWILSGSHPAEYEMGLDYEVVHQGKVSAYIKAKENVTHGGFSTLMQMFRADKY HHHCCCCCEEECCCCCCCCCCCCCHHEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHH VGKRLRFTAFVKSENVRDWAGLWMRVDGKETEPFAMDNMQNRPIKNTNNWQSYSVVLDIK HCCHHEEEEEECCCCCCHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC EGALGIAFGVLLSGEGCVWLDSIRFDEVDEKIPTTDLAENFYETLLEEPVNLQFEEVEK CCCHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCC >Mature Secondary Structure MHEEYKEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIFQRYIGMSVTDYIRKRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LTHAAQVLVSTERAVIDIAMQYGFSSQEAFTRAFKRMFQLPPKKYRKYFQSFYIEREGVS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC MQKGIPKGWILSGSHPAEYEMGLDYEVVHQGKVSAYIKAKENVTHGGFSTLMQMFRADKY HHHCCCCCEEECCCCCCCCCCCCCHHEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHH VGKRLRFTAFVKSENVRDWAGLWMRVDGKETEPFAMDNMQNRPIKNTNNWQSYSVVLDIK HCCHHEEEEEECCCCCCHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC EGALGIAFGVLLSGEGCVWLDSIRFDEVDEKIPTTDLAENFYETLLEEPVNLQFEEVEK CCCHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]