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The map label for this gene is dppC [H]

Identifier: 49183220

GI number: 49183220

Start: 186761

End: 187765

Strand: Direct

Name: dppC [H]

Synonym: BAS0187

Alternate gene names: 49183220

Gene position: 186761-187765 (Clockwise)

Preceding gene: 49183219

Following gene: 49183221

Centisome position: 3.57

GC content: 37.71

Gene sequence:

>1005_bases
ATGGGGGCTTATGAAATTAATAATCAGTTATTAACGAATGAAGAGAAAAAAGAATTAACGATAAATAAAGATCAGCAAAA
GATTAGCCGAAAGAAAGAAGTGTTTCGTAAGTTTGTATCGAATCCAATCGCAGTTTTAGGATCAGTGACGTTATTACTCA
TTATTGTTTTCTCGCTTATTGGTGAAAGTTTAACGCCATTTACTGCGAGTGAACAGGTAAAAAAGGCAACAAACTTACCA
CCGAGTAGTGAGCATTGGTTCGGAACCGATGATTTAGGTAGAGATATTTGGGCGCGTACTTGGGCTGGCGGAAAAATTTC
ACTAACAGTTGGGTTAGTAGCAGCAGCTCTAGACATAGGGCTTGGTGTGCTAATTGGAGGTTTTAGTGGATATGTAAGAG
GACGTAATTGTCTTGGAACGTTAATTGATGAGTGGATTATAAGAGGGATTGAAGTGCTATATGGCATCCCATATTTATTA
ATTGTTATTTTACTATTAATCGTTATGAAACCAGGACTCTTTACAATTATAATCGCTCTTGCGTTGACGGGGTGGATTGG
CATGGCACGTCTCATTCGGGCGCAAGTCTTATCTTTAAAGCAAAGAGAATTTGTTATTGCAGCAGAACGATTAGGCACAT
CTCATATGAAAATTATATATGGACATTTAATTCCAAACTTAACAGGAATTATTATCGTAAATTTATCATTTACAATTCCA
GCAGCTATTTTCTCAGAATCATTTTTAAGCTTTATCGGACTGGGAGTACAATCACCAGCGGCAAGCTGGGGAACAATGAC
GAATGATGCGCTTGGGACATTATTAAGCGGAGAATGGTGGCAACTTTTCTTCCCAGCAATCATGATTGCACTCATCATGT
TCGCATTTAATGCAATTGGTGATGGTTTGCAAGATGCAATTGATCCGAAAATCATAAAACGTAATCGAAAGGAGAAAAAA
CATGGCGCAAGTCTTATCTTTAGAAAACGTAACATTAGCCGTTGA

Upstream 100 bases:

>100_bases
TATAGTGCACTTTTAATCTTATGTATTTTTATTACAGATATTATTCACCGTATTGTTGATCCACGTATTCGTTCTATTAC
GTAAGGAGGGGGATGTTTAG

Downstream 100 bases:

>100_bases
AAAAGAGAATAGTAAGCAAGCGATTGTGAAACATGTTTCCTTTTTTATTAACGAAGGTGAAATAGTGGCACTTGTAGGAG
AGAGTGGCTCTGGAAAAAGT

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MGAYEINNQLLTNEEKKELTINKDQQKISRKKEVFRKFVSNPIAVLGSVTLLLIIVFSLIGESLTPFTASEQVKKATNLP
PSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIGLGVLIGGFSGYVRGRNCLGTLIDEWIIRGIEVLYGIPYLL
IVILLLIVMKPGLFTIIIALALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIIKRNRKEKK
HGASLIFRKRNISR

Sequences:

>Translated_334_residues
MGAYEINNQLLTNEEKKELTINKDQQKISRKKEVFRKFVSNPIAVLGSVTLLLIIVFSLIGESLTPFTASEQVKKATNLP
PSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIGLGVLIGGFSGYVRGRNCLGTLIDEWIIRGIEVLYGIPYLL
IVILLLIVMKPGLFTIIIALALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIIKRNRKEKK
HGASLIFRKRNISR
>Mature_333_residues
GAYEINNQLLTNEEKKELTINKDQQKISRKKEVFRKFVSNPIAVLGSVTLLLIIVFSLIGESLTPFTASEQVKKATNLPP
SSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIGLGVLIGGFSGYVRGRNCLGTLIDEWIIRGIEVLYGIPYLLI
VILLLIVMKPGLFTIIIALALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIPA
AIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIIKRNRKEKKH
GASLIFRKRNISR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=296, Percent_Identity=34.4594594594595, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1787498, Length=281, Percent_Identity=38.0782918149466, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1787760, Length=301, Percent_Identity=32.890365448505, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1789889, Length=246, Percent_Identity=33.739837398374, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1789964, Length=286, Percent_Identity=32.8671328671329, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1788505, Length=234, Percent_Identity=31.6239316239316, Blast_Score=111, Evalue=8e-26,
Organism=Escherichia coli, GI1787549, Length=295, Percent_Identity=27.4576271186441, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36805; Mature: 36674

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAYEINNQLLTNEEKKELTINKDQQKISRKKEVFRKFVSNPIAVLGSVTLLLIIVFSLI
CCCCCCCCCHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GESLTPFTASEQVKKATNLPPSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIG
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
LGVLIGGFSGYVRGRNCLGTLIDEWIIRGIEVLYGIPYLLIVILLLIVMKPGLFTIIIAL
HHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEHHHHH
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
DGLQDAIDPKIIKRNRKEKKHGASLIFRKRNISR
CHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure 
GAYEINNQLLTNEEKKELTINKDQQKISRKKEVFRKFVSNPIAVLGSVTLLLIIVFSLI
CCCCCCCCHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GESLTPFTASEQVKKATNLPPSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIG
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
LGVLIGGFSGYVRGRNCLGTLIDEWIIRGIEVLYGIPYLLIVILLLIVMKPGLFTIIIAL
HHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEHHHHH
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
DGLQDAIDPKIIKRNRKEKKHGASLIFRKRNISR
CHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]