Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is gntR [H]
Identifier: 49183195
GI number: 49183195
Start: 161257
End: 161988
Strand: Direct
Name: gntR [H]
Synonym: BAS0162
Alternate gene names: 49183195
Gene position: 161257-161988 (Clockwise)
Preceding gene: 49183194
Following gene: 49183196
Centisome position: 3.08
GC content: 34.97
Gene sequence:
>732_bases ATGACGAAATCAATGGAATTTCTTTATCCTGAAAAATGGCTTTCAAAAGCTTCTACAGGTGATCGTGTTGCGAGCGAATT GAGAATGCGCATTATTGCAGGTGTGATTGAAAGCGGTACCATACTGTCAGAAAATAAAATAGCTGCCGATTTTTCTGTAA GTCGGTCACCCGTTCGTGAAGCATTAAAATTACTAGTTTCTGAAAATATTATTCGCTTAGAAAGAATGGGCGCAGTTGTC ATTGGTTTAACCGAGAAAGAAATTGAAGAAATATATGATGTTCGTTTACTTATAGAAACGTTTATCTTTGAGCGACTTGG AAAGATGGACACAAATGATTTAGTAAGAGAACTAAATAAAATAATGGAAATGATGAAAATCGCCATTAAATATCATGATT CTGATGAATTTTCTTATCAAGATCTCTTATTCCATGAAACGATTATTCGAACCATTGAGCATTCCTACATCCTGATGATT TGGAATAATTTAAAGCCTGTTATGGAAAGCTTAATCCTTTTATCAATGCGTACTCGTTTCAAGGAAAAGTACGAAGACTT TGAACGGATTATTAAAAATCATGAGCTTTATATAAAAGCAATCGAATCAAAAGATCGAGCCCTCATGATTGAGGCCTTAC ATCAAAACTTTGATGATGTTCAAGGGAAAGTCGAAGACCTCTGGATGTCACAACAAATGTTATCTAAAGGAGTTGAGCAA GGACATGAGTAG
Upstream 100 bases:
>100_bases TCTAATAGAACCAAAGGAAACGATAAAAGCGCTTGCATAATTGAAAATCCGAGTTATAATACTTGTATACAAGTATACTT GATTAACACGAGGTGGGTTT
Downstream 100 bases:
>100_bases CTATATGTTAGGTATAGATATCGGTACAACAAGTACGAAAGCAGTTTTATTTACTGAAAAAGGCGAAGTCATTCAAACCG AGAATATTGGTTATCCACTT
Product: gluconate operon transcriptional repressor
Products: NA
Alternate protein names: P28 protein [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTKSMEFLYPEKWLSKASTGDRVASELRMRIIAGVIESGTILSENKIAADFSVSRSPVREALKLLVSENIIRLERMGAVV IGLTEKEIEEIYDVRLLIETFIFERLGKMDTNDLVRELNKIMEMMKIAIKYHDSDEFSYQDLLFHETIIRTIEHSYILMI WNNLKPVMESLILLSMRTRFKEKYEDFERIIKNHELYIKAIESKDRALMIEALHQNFDDVQGKVEDLWMSQQMLSKGVEQ GHE
Sequences:
>Translated_243_residues MTKSMEFLYPEKWLSKASTGDRVASELRMRIIAGVIESGTILSENKIAADFSVSRSPVREALKLLVSENIIRLERMGAVV IGLTEKEIEEIYDVRLLIETFIFERLGKMDTNDLVRELNKIMEMMKIAIKYHDSDEFSYQDLLFHETIIRTIEHSYILMI WNNLKPVMESLILLSMRTRFKEKYEDFERIIKNHELYIKAIESKDRALMIEALHQNFDDVQGKVEDLWMSQQMLSKGVEQ GHE >Mature_242_residues TKSMEFLYPEKWLSKASTGDRVASELRMRIIAGVIESGTILSENKIAADFSVSRSPVREALKLLVSENIIRLERMGAVVI GLTEKEIEEIYDVRLLIETFIFERLGKMDTNDLVRELNKIMEMMKIAIKYHDSDEFSYQDLLFHETIIRTIEHSYILMIW NNLKPVMESLILLSMRTRFKEKYEDFERIIKNHELYIKAIESKDRALMIEALHQNFDDVQGKVEDLWMSQQMLSKGVEQG HE
Specific function: Transcriptional repressor of the gluconate operon (gntRKPZ), which encodes the proteins for gluconate utilization. Represses mRNA synthesis by binding to the gnt operator; the binding is suppressed by gluconate or glucono-delta-lactone [H]
COG id: COG1802
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011711 - InterPro: IPR000524 - InterPro: IPR011991 [H]
Pfam domain/function: PF07729 FCD; PF00392 GntR [H]
EC number: NA
Molecular weight: Translated: 28513; Mature: 28381
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSMEFLYPEKWLSKASTGDRVASELRMRIIAGVIESGTILSENKIAADFSVSRSPVRE CCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHCCCCCHHHHHH ALKLLVSENIIRLERMGAVVIGLTEKEIEEIYDVRLLIETFIFERLGKMDTNDLVRELNK HHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IMEMMKIAIKYHDSDEFSYQDLLFHETIIRTIEHSYILMIWNNLKPVMESLILLSMRTRF HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHCHHHHHHHHHHHHHHHHH KEKYEDFERIIKNHELYIKAIESKDRALMIEALHQNFDDVQGKVEDLWMSQQMLSKGVEQ HHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC GHE CCC >Mature Secondary Structure TKSMEFLYPEKWLSKASTGDRVASELRMRIIAGVIESGTILSENKIAADFSVSRSPVRE CCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHCCCCCHHHHHH ALKLLVSENIIRLERMGAVVIGLTEKEIEEIYDVRLLIETFIFERLGKMDTNDLVRELNK HHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IMEMMKIAIKYHDSDEFSYQDLLFHETIIRTIEHSYILMIWNNLKPVMESLILLSMRTRF HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHCHHHHHHHHHHHHHHHHH KEKYEDFERIIKNHELYIKAIESKDRALMIEALHQNFDDVQGKVEDLWMSQQMLSKGVEQ HHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC GHE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8535972 [H]