Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ybbR [H]
Identifier: 49183190
GI number: 49183190
Start: 154560
End: 156050
Strand: Direct
Name: ybbR [H]
Synonym: BAS0157
Alternate gene names: 49183190
Gene position: 154560-156050 (Clockwise)
Preceding gene: 49183189
Following gene: 49183191
Centisome position: 2.96
GC content: 36.42
Gene sequence:
>1491_bases ATGGATAAGTTAATGGAGAATCATTGGTTTTTAAAAGGAATCTCATTACTATTGGCGTGTATGCTTTTTATGTCAGCGAC TTTAACTGAAAAAAATACGACATCGGGGATATTACCTTTTGCAAATGATGCGAAAGAAACACTAACTAATTATGCTATTA ACGTTAAGTATGATGAAGAGAAATATATTGTAAGTGGTATTCCGGCAGAGGGCGTTAAGGTGAAGTTAGAGGGTCCAAAA GCAGCAGTTGCTACAGCAAAGGCGAAAAAACAATTTGATATACCAGTTGATTTGAGAGATAGCGAAAAAGGAACTTATGA AGTTTCTTTGAAAACGAACGGACTTCCAGATGATGTGAAAGGAACAGTTCAGCCATCAACAATTAAAGTTACTCTTCATG AAAAGGCGAGAAAATATGTTCATGTAGATCTGAAATTATCAAATGAGGATCAGATGCCAGCAGGGGCTATTCTCGAAAAA TCAAGCCTTAAACCGGATACTGTTGAGGTAGTTGGGACGAAAGAAGAAATTGAAAGTATTTCATCTGCCAAAGCGTATGT TGATTTAAAAGGTGTTAATAAAACTGTTACAAAAACGCCCGAAGTTACATTATACAATAAAGAAGGAAAACGTTTAAATG TAAGAACGAGTCCATCTAAAATTAGTGTAACGTTGAATGTGGCGACGCAAGCTACGGCCAATAATACTGAAAAAACTGTT CCTATAGCATATACGAAAAAGGGGAGTTTACCGGAAGGATTGGCCGTTACAAATATTAGCGTTGAGCCGAGAGAAGTAAC GATAGCAGGTCCAAAAGATATATTAGATAATATACAATCGATAGAGGGGGTCGAAGTAGATCTTAGTCAATTGACAGAGT CTACAACATTCGATACCTCTGTTTTATTACCAAAGGGTGTAACAAGTGCGAAACCAAATCAAGTGAAGGTTTCAGTAGGC GTACAGAAAACAAAACAAACGAAAACAAGAACGATTGATGGTATATCAATTCAAAAAAATGGACTTTCGAAAGACGTTAC GGCCCAGTTACTTTCGCCGCAAGATGGGAAGATAAGCGTTGATATTTCAGGAGAAACAAGTATAGTAGATAAAATAATAG CTAATCAAATAACAGCAGTGATTAATCTACAAAATGTGTCTCCTGGGACGAAGGATGTTGCCATTCAAGTGAGTGGCCCT AGTAATATTTCAATAGAGCCAAAACAAAAAAGTGCTAAAGTCACAATTGTGAAGAAAGAAAATCCCGATAAAGAAGTACA GGGTAATGGTGAACAACCAAATTCAAATAATAATCAAGATAATCAAGATAATCAAACTGAAAAACCAAAAAATCCTGAAC CAGAACCTAATCCTGATCCTGATCCGGAAAAGGAGAAGGAACCGGAACAAAATAAAGATAAAGAAACTAGCCAAGAGCCA ACAGTAGATAATCAAAAAGAGCCAGAAAAAGGAGCGAATCATAATGGGTAA
Upstream 100 bases:
>100_bases GATTTGAAGACAGAACAACTGAAAGATATGTTGTTAGCTGAATTTAGTGCGAACGAAAAAACGACTTCTTCGTCTTTATG GAATTGGAGGAGAAAGCGTC
Downstream 100 bases:
>100_bases ATATTTTGGTACAGATGGAGTACGCGGGGTTGCGAATAAGGAGTTAACACCTGAATTAGCGTTCAAAATTGGACGTTTCG GTGGTTATGTATTAACAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEEKYIVSGIPAEGVKVKLEGPK AAVATAKAKKQFDIPVDLRDSEKGTYEVSLKTNGLPDDVKGTVQPSTIKVTLHEKARKYVHVDLKLSNEDQMPAGAILEK SSLKPDTVEVVGTKEEIESISSAKAYVDLKGVNKTVTKTPEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV PIAYTKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTSVLLPKGVTSAKPNQVKVSVG VQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISVDISGETSIVDKIIANQITAVINLQNVSPGTKDVAIQVSGP SNISIEPKQKSAKVTIVKKENPDKEVQGNGEQPNSNNNQDNQDNQTEKPKNPEPEPNPDPDPEKEKEPEQNKDKETSQEP TVDNQKEPEKGANHNG
Sequences:
>Translated_496_residues MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEEKYIVSGIPAEGVKVKLEGPK AAVATAKAKKQFDIPVDLRDSEKGTYEVSLKTNGLPDDVKGTVQPSTIKVTLHEKARKYVHVDLKLSNEDQMPAGAILEK SSLKPDTVEVVGTKEEIESISSAKAYVDLKGVNKTVTKTPEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV PIAYTKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTSVLLPKGVTSAKPNQVKVSVG VQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISVDISGETSIVDKIIANQITAVINLQNVSPGTKDVAIQVSGP SNISIEPKQKSAKVTIVKKENPDKEVQGNGEQPNSNNNQDNQDNQTEKPKNPEPEPNPDPDPEKEKEPEQNKDKETSQEP TVDNQKEPEKGANHNG >Mature_496_residues MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEEKYIVSGIPAEGVKVKLEGPK AAVATAKAKKQFDIPVDLRDSEKGTYEVSLKTNGLPDDVKGTVQPSTIKVTLHEKARKYVHVDLKLSNEDQMPAGAILEK SSLKPDTVEVVGTKEEIESISSAKAYVDLKGVNKTVTKTPEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV PIAYTKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTSVLLPKGVTSAKPNQVKVSVG VQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISVDISGETSIVDKIIANQITAVINLQNVSPGTKDVAIQVSGP SNISIEPKQKSAKVTIVKKENPDKEVQGNGEQPNSNNNQDNQDNQTEKPKNPEPEPNPDPDPEKEKEPEQNKDKETSQEP TVDNQKEPEKGANHNG
Specific function: Unknown
COG id: COG4856
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 YbbR-like domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012505 [H]
Pfam domain/function: PF07949 YbbR [H]
EC number: NA
Molecular weight: Translated: 53765; Mature: 53765
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCEEEEEEECCC KYIVSGIPAEGVKVKLEGPKAAVATAKAKKQFDIPVDLRDSEKGTYEVSLKTNGLPDDVK EEEEECCCCCCEEEEECCCCEEEEEHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCC GTVQPSTIKVTLHEKARKYVHVDLKLSNEDQMPAGAILEKSSLKPDTVEVVGTKEEIESI CCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEECHHHHHHH SSAKAYVDLKGVNKTVTKTPEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV HCCEEEEEEECCCCEECCCCCEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCEE PIAYTKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTS EEEEECCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHCCCCEEEHHHHCCCCCCCCE VLLPKGVTSAKPNQVKVSVGVQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISV EECCCCCCCCCCCEEEEEECCCCCCCCHHEEECCEEEECCCCCCCHHHHHCCCCCCEEEE DISGETSIVDKIIANQITAVINLQNVSPGTKDVAIQVSGPSNISIEPKQKSAKVTIVKKE EECCCHHHHHHHHHHCEEEEEEEECCCCCCCEEEEEECCCCCCEECCCCCCCEEEEEECC NPDKEVQGNGEQPNSNNNQDNQDNQTEKPKNPEPEPNPDPDPEKEKEPEQNKDKETSQEP CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TVDNQKEPEKGANHNG CCCCCCCCCCCCCCCC >Mature Secondary Structure MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCEEEEEEECCC KYIVSGIPAEGVKVKLEGPKAAVATAKAKKQFDIPVDLRDSEKGTYEVSLKTNGLPDDVK EEEEECCCCCCEEEEECCCCEEEEEHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCC GTVQPSTIKVTLHEKARKYVHVDLKLSNEDQMPAGAILEKSSLKPDTVEVVGTKEEIESI CCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEECHHHHHHH SSAKAYVDLKGVNKTVTKTPEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV HCCEEEEEEECCCCEECCCCCEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCEE PIAYTKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTS EEEEECCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHCCCCEEEHHHHCCCCCCCCE VLLPKGVTSAKPNQVKVSVGVQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISV EECCCCCCCCCCCEEEEEECCCCCCCCHHEEECCEEEECCCCCCCHHHHHCCCCCCEEEE DISGETSIVDKIIANQITAVINLQNVSPGTKDVAIQVSGPSNISIEPKQKSAKVTIVKKE EECCCHHHHHHHHHHCEEEEEEEECCCCCCCEEEEEECCCCCCEECCCCCCCEEEEEECC NPDKEVQGNGEQPNSNNNQDNQDNQTEKPKNPEPEPNPDPDPEKEKEPEQNKDKETSQEP CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TVDNQKEPEKGANHNG CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]