Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is pdaB [H]
Identifier: 49183184
GI number: 49183184
Start: 144111
End: 144875
Strand: Reverse
Name: pdaB [H]
Synonym: BAS0150
Alternate gene names: 49183184
Gene position: 144875-144111 (Counterclockwise)
Preceding gene: 49183202
Following gene: 49183182
Centisome position: 2.77
GC content: 36.08
Gene sequence:
>765_bases ATGTTTTTCTTTTTTATTACGAGTAAAAGAAACTTTAAACACATTAGCTTAATAGTGATACTTTCCTTATTTACCGCATG GCTACTCTTTTTGAAAACATATTCACACGAGTCTGCTTTTTCAACTGCTACAGGGCCTAAAGTTATTTACAAAGGCGACA CCTCTAAAAAACAAGTTGCATTCACGTTTGATATTAGTTGGGGAGACAAAAAAGCAATTCCAATCCTTGATACACTTAAA GAAAGAGATATTAAGAATGCAACCTTCTTCCTTTCTGCTGCATGGGCAGAAAGACACCCTGATGTTGTTGAACGCATCAT AAAAGATGGACATGAAATCGGTAGTATGGGTTATAATTACACATCCTACACTTCTCTAGAGACAAATGAAATAAGAAGAG ATCTTCTGCGAGCACAAGATGTTTTTACAAAACTCGGTGTGAAACAAATCAAACTATTACGTCCACCTAGTGGAGACTTT AACAAAGCAACACTTAAAATAGCAGAATCACTCGGATACACTGTCGTTCATTGGAGTAATAACTCAAACGATTGGAAAAA CCCTGGCGTAAACAAGATCGTTTCCACCGTCTCTAATAATTTAAAAGGTGGAGATATCGTCTTATTACATGCATCCGATT CTGCCCTTCAAACAAATAAAGCTTTGCCACTGCTTCTACAGAAATTAAAGAGTGACGGCTATGAGCAAATATCCGTATCA CAACTTATTTCCAACACAAGTACGAAAAGTAAAGATGTTCAATAA
Upstream 100 bases:
>100_bases TCCATTATATCCACTACTTACGATATTAATCCCTTGTTCTCTTTTTTATATTTACAGCATATATGTAACTGAAAAGGATT GGACAAAGGGGCGTAATATT
Downstream 100 bases:
>100_bases TTTTTTACACATAAAAAGCTCCATTACCTTTCATTCAGGTAATGGAGCTTTTTTCATCCCGATATTTTCATACATAAAAC TATCCTGCGTAAAAACGCTC
Product: polysaccharide deacetylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MFFFFITSKRNFKHISLIVILSLFTAWLLFLKTYSHESAFSTATGPKVIYKGDTSKKQVAFTFDISWGDKKAIPILDTLK ERDIKNATFFLSAAWAERHPDVVERIIKDGHEIGSMGYNYTSYTSLETNEIRRDLLRAQDVFTKLGVKQIKLLRPPSGDF NKATLKIAESLGYTVVHWSNNSNDWKNPGVNKIVSTVSNNLKGGDIVLLHASDSALQTNKALPLLLQKLKSDGYEQISVS QLISNTSTKSKDVQ
Sequences:
>Translated_254_residues MFFFFITSKRNFKHISLIVILSLFTAWLLFLKTYSHESAFSTATGPKVIYKGDTSKKQVAFTFDISWGDKKAIPILDTLK ERDIKNATFFLSAAWAERHPDVVERIIKDGHEIGSMGYNYTSYTSLETNEIRRDLLRAQDVFTKLGVKQIKLLRPPSGDF NKATLKIAESLGYTVVHWSNNSNDWKNPGVNKIVSTVSNNLKGGDIVLLHASDSALQTNKALPLLLQKLKSDGYEQISVS QLISNTSTKSKDVQ >Mature_254_residues MFFFFITSKRNFKHISLIVILSLFTAWLLFLKTYSHESAFSTATGPKVIYKGDTSKKQVAFTFDISWGDKKAIPILDTLK ERDIKNATFFLSAAWAERHPDVVERIIKDGHEIGSMGYNYTSYTSLETNEIRRDLLRAQDVFTKLGVKQIKLLRPPSGDF NKATLKIAESLGYTVVHWSNNSNDWKNPGVNKIVSTVSNNLKGGDIVLLHASDSALQTNKALPLLLQKLKSDGYEQISVS QLISNTSTKSKDVQ
Specific function: Necessary to maintain spores after the late stage of sporulation. Might be involved in cortex formation [H]
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Forespore. Note=Produced in the mother cell compartment and transported into the forespore [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide deacetylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011330 - InterPro: IPR002509 - InterPro: IPR014132 [H]
Pfam domain/function: PF01522 Polysacc_deac_1 [H]
EC number: NA
Molecular weight: Translated: 28567; Mature: 28567
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFFFITSKRNFKHISLIVILSLFTAWLLFLKTYSHESAFSTATGPKVIYKGDTSKKQVA CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEECCCCCCEEE FTFDISWGDKKAIPILDTLKERDIKNATFFLSAAWAERHPDVVERIIKDGHEIGSMGYNY EEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHHHCCHHHCCCCCCC TSYTSLETNEIRRDLLRAQDVFTKLGVKQIKLLRPPSGDFNKATLKIAESLGYTVVHWSN CEECCCCHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCHHHHHHHHHCCEEEEEECC NSNDWKNPGVNKIVSTVSNNLKGGDIVLLHASDSALQTNKALPLLLQKLKSDGYEQISVS CCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHCCCCCHHHHH QLISNTSTKSKDVQ HHHHCCCCCCCCCC >Mature Secondary Structure MFFFFITSKRNFKHISLIVILSLFTAWLLFLKTYSHESAFSTATGPKVIYKGDTSKKQVA CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEECCCCCCEEE FTFDISWGDKKAIPILDTLKERDIKNATFFLSAAWAERHPDVVERIIKDGHEIGSMGYNY EEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHHHCCHHHCCCCCCC TSYTSLETNEIRRDLLRAQDVFTKLGVKQIKLLRPPSGDFNKATLKIAESLGYTVVHWSN CEECCCCHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCHHHHHHHHHCCEEEEEECC NSNDWKNPGVNKIVSTVSNNLKGGDIVLLHASDSALQTNKALPLLLQKLKSDGYEQISVS CCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHCCCCCHHHHH QLISNTSTKSKDVQ HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969501; 9384377; 8576055 [H]