Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is gerD [H]
Identifier: 49183182
GI number: 49183182
Start: 142638
End: 143255
Strand: Reverse
Name: gerD [H]
Synonym: BAS0148
Alternate gene names: 49183182
Gene position: 143255-142638 (Counterclockwise)
Preceding gene: 49183184
Following gene: 49183071
Centisome position: 2.74
GC content: 35.44
Gene sequence:
>618_bases ATGAAACGGATGCTGCTCGTTTTGACTTCTTCTTTTCTATTTCTTGTACTTGTAGCATGTGCACAAGAAAAAGAAGCAAA GTCCGAACTTGATTATGATCAAACGAAGAAAATGATTGTTGATATTTTAAAAACCGATCAAGGTAAGAAAGCCATTCAAG ATGTGTTAACTGATGAAAAAATGAAACAGGCACTCATACTAGATGAAACAGTAGTAAAGAAAACGATTGAAGATGCAATG GTATCCGACAAAGGGCAACAATTCTGGGAAAAGCTCTTTAAAGACCCTGAGTTCTCATCGAAATTTGCTAAAAGTATGGG AAAAGAACAAACAGCCTTAATGAAAACATTACTAAAAGACCCTGAATACCAAGCAGGTGTTATAGAAATTATGAAAAACC CTGAAGTAGAAAAAATGATGTTACAAACGATGAAGAGCAAAGAATATCGTCAATATTTACAACAAGTACTAACAGAAACT GCTGAAAGCCCACTCTTCCAAGCTAAGATGATTGATATTATTAGTAAAGGTGTCCAAAAAGCCGAAAAAAGTGGTTCTGA TAAAAAGGAAGCAGGCGGTGAAGGTGGTTCTCAAGAAGGTAAAAAGGAACAGCAGTAA
Upstream 100 bases:
>100_bases TATCAATGACAATTTCAAAAAGCTAGCCATGTTCATGTATAAATTCCTTAAAGATATTTATATTAAAAAGAGAGAACTGT GCTGAAAGGAGTTCCAACTT
Downstream 100 bases:
>100_bases AAATAATAACACTAATAATGAGTGGACAATATATGTATCGTCCACTCATTATTATTTTATTTTTGCGCAAAAGCTGTTTT ATCAATTACTGTTTCAGCTA
Product: spore germination protein GerD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKRMLLVLTSSFLFLVLVACAQEKEAKSELDYDQTKKMIVDILKTDQGKKAIQDVLTDEKMKQALILDETVVKKTIEDAM VSDKGQQFWEKLFKDPEFSSKFAKSMGKEQTALMKTLLKDPEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTET AESPLFQAKMIDIISKGVQKAEKSGSDKKEAGGEGGSQEGKKEQQ
Sequences:
>Translated_205_residues MKRMLLVLTSSFLFLVLVACAQEKEAKSELDYDQTKKMIVDILKTDQGKKAIQDVLTDEKMKQALILDETVVKKTIEDAM VSDKGQQFWEKLFKDPEFSSKFAKSMGKEQTALMKTLLKDPEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTET AESPLFQAKMIDIISKGVQKAEKSGSDKKEAGGEGGSQEGKKEQQ >Mature_205_residues MKRMLLVLTSSFLFLVLVACAQEKEAKSELDYDQTKKMIVDILKTDQGKKAIQDVLTDEKMKQALILDETVVKKTIEDAM VSDKGQQFWEKLFKDPEFSSKFAKSMGKEQTALMKTLLKDPEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTET AESPLFQAKMIDIISKGVQKAEKSGSDKKEAGGEGGSQEGKKEQQ
Specific function: May be involved in fructose recognition during germination [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23262; Mature: 23262
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMLLVLTSSFLFLVLVACAQEKEAKSELDYDQTKKMIVDILKTDQGKKAIQDVLTDEK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH MKQALILDETVVKKTIEDAMVSDKGQQFWEKLFKDPEFSSKFAKSMGKEQTALMKTLLKD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHCC PEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTETAESPLFQAKMIDIISKGVQK CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH AEKSGSDKKEAGGEGGSQEGKKEQQ HHHCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKRMLLVLTSSFLFLVLVACAQEKEAKSELDYDQTKKMIVDILKTDQGKKAIQDVLTDEK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH MKQALILDETVVKKTIEDAMVSDKGQQFWEKLFKDPEFSSKFAKSMGKEQTALMKTLLKD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHCC PEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTETAESPLFQAKMIDIISKGVQK CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH AEKSGSDKKEAGGEGGSQEGKKEQQ HHHCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2517635; 8969501; 9384377; 8576055; 7559346 [H]