Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is cwlD [H]
Identifier: 49183180
GI number: 49183180
Start: 140659
End: 141372
Strand: Direct
Name: cwlD [H]
Synonym: BAS0146
Alternate gene names: 49183180
Gene position: 140659-141372 (Clockwise)
Preceding gene: 49183179
Following gene: 49183181
Centisome position: 2.69
GC content: 35.57
Gene sequence:
>714_bases ATGAAGAGAATTCGAATTATCTCTTTTGCACTCGCTGCGGTTATTTTGTTTTTTTTAGTCAAACAAGAATTTCAAATTAT AAAATCGTGGCGAGCTTGGAATTTACCCTTATCAGGGAAAGTAATTGTATTAGATGCTGGGCATGGTGGACCAGATGGAG GAGCAGTTGGTGGCAAGGATATTGTAGAAAAAGATATTACGCTTGAGATTACAAAGAAGGTACAAGATTATTTACAAGAA CAAGGTGCGTTAGTTATTTTAACGCGTGAGGGAGATTATGATTTAGCCCAGAAAGATACAAAGTCATATAGTAGACGTAA AGCAGAAGATTTAAAAAAGCGTGTAGAGATTATTAATAAACCTGATGTAGACTTCTTTGCGAGCATTCATTTAAATGCTT TGACTAGTAGTGGATCGAAGGGGGCACAAACGTTCTATTACCGTTCTTCAATTGAAAATGAACGTGCTGCGAAATTTATA CAAGCTGAGTTGAGAACAAGTTTAGAGAATACAAATCGTTCTGCTAAAACAATTTCTCATGTGTATTTATTAAAGTATGC GAAAACACCAGGCGCTTTAATTGAAGCTGGCTTTTTATCGAATGTAAATGAAAGGTATATGTTAAATTCGGAGAAATATC AGCAAAAGGTAGCGGCTGCAGTATATCGTGGTATATTACGTTATTTCACGGAAAAAGGAAATCCTCCAGAATAA
Upstream 100 bases:
>100_bases AGGTGAAAGAAGATATCGATTAAAGCTTCATTAAGACAAGCATAAACTTTCCTCTTGTCCCATATAAGTAATTAGAGGGA CTAGCTGGAGGAGGAAAGGT
Downstream 100 bases:
>100_bases GGGGGATTTTTTTGAGTTTCTCTCGTTAACGAAGTTTTCCGAAAATATGTTATACTGGAAATGTAAACGCATTTATTTCA AAAGTGAAGAGAGATATATT
Product: germination-specific N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: Autolysin; Cell wall hydrolase [H]
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKRIRIISFALAAVILFFLVKQEFQIIKSWRAWNLPLSGKVIVLDAGHGGPDGGAVGGKDIVEKDITLEITKKVQDYLQE QGALVILTREGDYDLAQKDTKSYSRRKAEDLKKRVEIINKPDVDFFASIHLNALTSSGSKGAQTFYYRSSIENERAAKFI QAELRTSLENTNRSAKTISHVYLLKYAKTPGALIEAGFLSNVNERYMLNSEKYQQKVAAAVYRGILRYFTEKGNPPE
Sequences:
>Translated_237_residues MKRIRIISFALAAVILFFLVKQEFQIIKSWRAWNLPLSGKVIVLDAGHGGPDGGAVGGKDIVEKDITLEITKKVQDYLQE QGALVILTREGDYDLAQKDTKSYSRRKAEDLKKRVEIINKPDVDFFASIHLNALTSSGSKGAQTFYYRSSIENERAAKFI QAELRTSLENTNRSAKTISHVYLLKYAKTPGALIEAGFLSNVNERYMLNSEKYQQKVAAAVYRGILRYFTEKGNPPE >Mature_237_residues MKRIRIISFALAAVILFFLVKQEFQIIKSWRAWNLPLSGKVIVLDAGHGGPDGGAVGGKDIVEKDITLEITKKVQDYLQE QGALVILTREGDYDLAQKDTKSYSRRKAEDLKKRVEIINKPDVDFFASIHLNALTSSGSKGAQTFYYRSSIENERAAKFI QAELRTSLENTNRSAKTISHVYLLKYAKTPGALIEAGFLSNVNERYMLNSEKYQQKVAAAVYRGILRYFTEKGNPPE
Specific function: Unknown
COG id: COG0860
COG function: function code M; N-acetylmuramoyl-L-alanine amidase
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788776, Length=234, Percent_Identity=29.4871794871795, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1790611, Length=238, Percent_Identity=25.2100840336134, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI87082163, Length=235, Percent_Identity=26.3829787234043, Blast_Score=77, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002508 - InterPro: IPR014234 [H]
Pfam domain/function: PF01520 Amidase_3 [H]
EC number: =3.5.1.28 [H]
Molecular weight: Translated: 26684; Mature: 26684
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIRIISFALAAVILFFLVKQEFQIIKSWRAWNLPLSGKVIVLDAGHGGPDGGAVGGKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHH IVEKDITLEITKKVQDYLQEQGALVILTREGDYDLAQKDTKSYSRRKAEDLKKRVEIINK HHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PDVDFFASIHLNALTSSGSKGAQTFYYRSSIENERAAKFIQAELRTSLENTNRSAKTISH CCCHHHHHEEHHHHHCCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VYLLKYAKTPGALIEAGFLSNVNERYMLNSEKYQQKVAAAVYRGILRYFTEKGNPPE HHHHHCCCCCCHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKRIRIISFALAAVILFFLVKQEFQIIKSWRAWNLPLSGKVIVLDAGHGGPDGGAVGGKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHH IVEKDITLEITKKVQDYLQEQGALVILTREGDYDLAQKDTKSYSRRKAEDLKKRVEIINK HHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PDVDFFASIHLNALTSSGSKGAQTFYYRSSIENERAAKFIQAELRTSLENTNRSAKTISH CCCHHHHHEEHHHHHCCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VYLLKYAKTPGALIEAGFLSNVNERYMLNSEKYQQKVAAAVYRGILRYFTEKGNPPE HHHHHCCCCCCHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7559346; 8969501; 9384377 [H]