Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
---|---|
Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is tuf [H]
Identifier: 49183142
GI number: 49183142
Start: 119377
End: 120564
Strand: Direct
Name: tuf [H]
Synonym: BAS0108
Alternate gene names: 49183142
Gene position: 119377-120564 (Clockwise)
Preceding gene: 49183141
Following gene: 49183143
Centisome position: 2.28
GC content: 43.94
Gene sequence:
>1188_bases ATGGCTAAAGCTAAATTCGAACGTTCTAAACCCCATGTTAACATCGGTACAATCGGCCACGTTGACCATGGTAAAACTAC ATTAACTGCTGCGATCACTACAGTACTTGCAAAAGCTGGTGGTGCTGAAGCACGCGGATACGATCAAATCGATGCTGCTC CAGAAGAAAGAGAGCGCGGTATCACAATCTCAACTGCACACGTTGAGTACGAAACTGAAACTCGTCACTATGCACACGTT GACTGCCCAGGTCACGCTGACTATGTTAAAAACATGATCACTGGTGCTGCTCAAATGGACGGCGGTATCTTAGTAGTATC TGCTGCTGATGGCCCAATGCCTCAAACTCGTGAGCACATCCTTCTTTCTCGTCAAGTAGGTGTACCTTACATCGTTGTAT TCTTAAACAAATGCGACATGGTAGACGACGAAGAATTATTAGAATTAGTAGAAATGGAAGTTCGCGACCTATTATCTGAA TACGGATTCCCAGGCGACGACATTCCTGTAATCAAAGGTTCTGCTCTTAAAGCTCTTCAAGGAGAAGCTGATTGGGAAGC AAAAATCATTGAATTAATGGCTGAAGTTGATGCTTACATCCCAACTCCAGAACGTGAAACTGACAAACCATTCTTAATGC CTGTAGAGGACGTATTCTCTATCACAGGTCGTGGTACAGTTGCTACTGGTCGTGTTGAGCGCGGTATCGTTAAAGTTGGT GACGTAGTAGAAATCATCGGTCTTGCTGAAGAAAATGCTTCTACAACTGTAACTGGTGTAGAGATGTTCCGTAAACTTCT TGACCAAGCTCAAGCTGGAGACAACATCGGTGCTTTACTTCGTGGGGTTGCTCGTGAAGACATCCAACGTGGACAAGTAC TTGCAAAAAGCGGTTCTGTAAAAGCTCACGCTAAATTCAAAGCTGAAGTTTTCGTATTATCTAAAGAAGAAGGTGGACGT CACACTCCATTCTTCGCTAACTACCGTCCTCAGTTCTACTTCCGTACAACTGACGTAACTGGTATCATCCAATTACCAGA AGGTACTGAAATGGTAATGCCTGGTGACAACATCGAAATGACTATCGAACTTATCGCTCCAATCGCTATCGAAGAGGGAA CTAAATTCTCTATTCGTGAAGGTGGACGTACAGTAGGTTACGGTGTAGTTGCTACTATCGTTGAGTAA
Upstream 100 bases:
>100_bases TTCACGTATAACTACTTATGTAAGCTTAGAAAGTGGGACGCAAGTTTCGCTTTCTAGCCTAAATATAAAATAACCTATAT AAACTAAGGAGGAATTTAGA
Downstream 100 bases:
>100_bases TCTTAACTGATATAAAAAACCCCGAGGGATTTTCCCTTGGGGTTTTTGTTTGCGTTTATATAATAAATAAAATCATATTT TTATGTTTTGACGAGTTTCT
Product: elongation factor Tu
Products: GDP; phosphate
Alternate protein names: EF-Tu [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MAKAKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAHVEYETETRHYAHV DCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSE YGFPGDDIPVIKGSALKALQGEADWEAKIIELMAEVDAYIPTPERETDKPFLMPVEDVFSITGRGTVATGRVERGIVKVG DVVEIIGLAEENASTTVTGVEMFRKLLDQAQAGDNIGALLRGVAREDIQRGQVLAKSGSVKAHAKFKAEVFVLSKEEGGR HTPFFANYRPQFYFRTTDVTGIIQLPEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE
Sequences:
>Translated_395_residues MAKAKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAHVEYETETRHYAHV DCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSE YGFPGDDIPVIKGSALKALQGEADWEAKIIELMAEVDAYIPTPERETDKPFLMPVEDVFSITGRGTVATGRVERGIVKVG DVVEIIGLAEENASTTVTGVEMFRKLLDQAQAGDNIGALLRGVAREDIQRGQVLAKSGSVKAHAKFKAEVFVLSKEEGGR HTPFFANYRPQFYFRTTDVTGIIQLPEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE >Mature_394_residues AKAKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAHVEYETETRHYAHVD CPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEY GFPGDDIPVIKGSALKALQGEADWEAKIIELMAEVDAYIPTPERETDKPFLMPVEDVFSITGRGTVATGRVERGIVKVGD VVEIIGLAEENASTTVTGVEMFRKLLDQAQAGDNIGALLRGVAREDIQRGQVLAKSGSVKAHAKFKAEVFVLSKEEGGRH TPFFANYRPQFYFRTTDVTGIIQLPEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE
Specific function: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis [H]
COG id: COG0050
COG function: function code J; GTPases - translation elongation factors
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily [H]
Homologues:
Organism=Homo sapiens, GI34147630, Length=396, Percent_Identity=56.8181818181818, Blast_Score=473, Evalue=1e-133, Organism=Homo sapiens, GI4503475, Length=357, Percent_Identity=33.3333333333333, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI4503471, Length=450, Percent_Identity=29.3333333333333, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI223555963, Length=446, Percent_Identity=29.8206278026906, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI5729864, Length=446, Percent_Identity=29.8206278026906, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI194018522, Length=345, Percent_Identity=27.8260869565217, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI194097354, Length=344, Percent_Identity=27.906976744186, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI54607086, Length=321, Percent_Identity=28.6604361370716, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI194018520, Length=344, Percent_Identity=27.906976744186, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI46094014, Length=331, Percent_Identity=27.7945619335347, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI4503507, Length=358, Percent_Identity=27.6536312849162, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI157426893, Length=236, Percent_Identity=29.6610169491525, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI1790412, Length=394, Percent_Identity=75.6345177664975, Blast_Score=607, Evalue=1e-175, Organism=Escherichia coli, GI1789737, Length=394, Percent_Identity=75.6345177664975, Blast_Score=607, Evalue=1e-175, Organism=Escherichia coli, GI2367247, Length=370, Percent_Identity=30, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI48994988, Length=240, Percent_Identity=32.9166666666667, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789108, Length=321, Percent_Identity=31.7757009345794, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI1790835, Length=146, Percent_Identity=31.5068493150685, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1788922, Length=147, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17556456, Length=399, Percent_Identity=52.1303258145363, Blast_Score=403, Evalue=1e-113, Organism=Caenorhabditis elegans, GI25141371, Length=386, Percent_Identity=42.7461139896373, Blast_Score=327, Evalue=7e-90, Organism=Caenorhabditis elegans, GI17552884, Length=452, Percent_Identity=30.9734513274336, Blast_Score=181, Evalue=7e-46, Organism=Caenorhabditis elegans, GI17569207, Length=452, Percent_Identity=30.9734513274336, Blast_Score=181, Evalue=7e-46, Organism=Caenorhabditis elegans, GI32566303, Length=434, Percent_Identity=29.7235023041475, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI32566629, Length=458, Percent_Identity=27.292576419214, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI115532067, Length=429, Percent_Identity=27.2727272727273, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI115532065, Length=428, Percent_Identity=27.3364485981308, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17506081, Length=266, Percent_Identity=29.6992481203008, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI32566301, Length=150, Percent_Identity=37.3333333333333, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17509919, Length=288, Percent_Identity=26.7361111111111, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17557151, Length=232, Percent_Identity=28.8793103448276, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17565438, Length=426, Percent_Identity=23.7089201877934, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6324761, Length=398, Percent_Identity=65.3266331658292, Blast_Score=532, Evalue=1e-152, Organism=Saccharomyces cerevisiae, GI6325337, Length=444, Percent_Identity=30.1801801801802, Blast_Score=176, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6319594, Length=444, Percent_Identity=30.1801801801802, Blast_Score=176, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6322937, Length=349, Percent_Identity=26.0744985673352, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320377, Length=352, Percent_Identity=28.4090909090909, Blast_Score=93, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6320863, Length=267, Percent_Identity=28.0898876404494, Blast_Score=83, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6323320, Length=238, Percent_Identity=29.8319327731092, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=135, Percent_Identity=34.8148148148148, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI281363316, Length=394, Percent_Identity=58.6294416243655, Blast_Score=482, Evalue=1e-136, Organism=Drosophila melanogaster, GI17864358, Length=394, Percent_Identity=58.6294416243655, Blast_Score=482, Evalue=1e-136, Organism=Drosophila melanogaster, GI19921738, Length=385, Percent_Identity=48.3116883116883, Blast_Score=389, Evalue=1e-108, Organism=Drosophila melanogaster, GI45553807, Length=450, Percent_Identity=29.7777777777778, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI45553816, Length=450, Percent_Identity=29.7777777777778, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24651721, Length=450, Percent_Identity=29.7777777777778, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI17864154, Length=450, Percent_Identity=29.7777777777778, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24652838, Length=450, Percent_Identity=30, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI17137572, Length=450, Percent_Identity=30, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI19922690, Length=303, Percent_Identity=32.6732673267327, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI17137380, Length=342, Percent_Identity=29.5321637426901, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI45550900, Length=338, Percent_Identity=29.585798816568, Blast_Score=124, Evalue=8e-29, Organism=Drosophila melanogaster, GI24647046, Length=290, Percent_Identity=26.2068965517241, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24647048, Length=335, Percent_Identity=26.2686567164179, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI28572034, Length=242, Percent_Identity=32.2314049586777, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24582462, Length=165, Percent_Identity=32.7272727272727, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI78706572, Length=236, Percent_Identity=27.9661016949153, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: 20568 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000795 - InterPro: IPR005225 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR004541 - InterPro: IPR004160 - InterPro: IPR009000 [H]
Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; PF03143 GTP_EFTU_D3 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 42939; Mature: 42808
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERG CCCCCCCCCCCCEEECEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC ITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHI CEEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHCHHCCCCCEEEEECCCCCCCCCHHHE LLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYGFPGDDIPVIKGSALKALQ EEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHC GEADWEAKIIELMAEVDAYIPTPERETDKPFLMPVEDVFSITGRGTVATGRVERGIVKVG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHCCCCEEEECHHHCCEEECC DVVEIIGLAEENASTTVTGVEMFRKLLDQAQAGDNIGALLRGVAREDIQRGQVLAKSGSV CHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCE KAHAKFKAEVFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQLPEGTEMVMPGDNIEM EEEEEEEEEEEEEECCCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCEEEECCCCCEE TIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE EEEEEEEEEECCCCEEEECCCCCEECCEEEEEEEC >Mature Secondary Structure AKAKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERG CCCCCCCCCCCEEECEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC ITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHI CEEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHCHHCCCCCEEEEECCCCCCCCCHHHE LLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYGFPGDDIPVIKGSALKALQ EEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHC GEADWEAKIIELMAEVDAYIPTPERETDKPFLMPVEDVFSITGRGTVATGRVERGIVKVG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHCCCCEEEECHHHCCEEECC DVVEIIGLAEENASTTVTGVEMFRKLLDQAQAGDNIGALLRGVAREDIQRGQVLAKSGSV CHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCE KAHAKFKAEVFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQLPEGTEMVMPGDNIEM EEEEEEEEEEEEEECCCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCEEEECCCCCEE TIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE EEEEEEEEEECCCCEEEECCCCCEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA