Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is yacO [H]
Identifier: 49183125
GI number: 49183125
Start: 101664
End: 102407
Strand: Direct
Name: yacO [H]
Synonym: BAS0091
Alternate gene names: 49183125
Gene position: 101664-102407 (Clockwise)
Preceding gene: 49183124
Following gene: 49183126
Centisome position: 1.94
GC content: 37.5
Gene sequence:
>744_bases ATGAGTAGTGAATATATTATTGGACGTAACCCTGTAATTGAAGCGTTACGATCAGGGAGAGATATTAATAAAATTTGGAT CGCAGAAGGTGCTGCCAAAGGACAAGTACAAATTGTACTAGCGCTAGCGAAAGAAAATAAGATTATTTTACAACATGCAC CAAAAAAGAAATTAGATCAATTAGTTGAGGGGAACCATCAAGGTGTAATTGCTCAAGTGGCCGCATATCAATATGCTGAG CTAGAAGATCTATTCAAAGTAGCAGAGAAGCGCAATGAAGATCCGTTCTTCTTAATTTTAGATGAAATTGAAGACCCGCA TAACCTAGGTTCTATTATGCGTACTGCGGATGCAACAGGAGCTCATGGAATTATTATTCCGAAAAGAAGAGCTGTGGGAC TTACAGCTTCAGTTGCGAAAGCATCTACCGGGGCAATTGAATATATTCCTGTTGCACGTGTAACGAATTTATCTCGTACA ATCGATGAATTAAAAGAACGTGGACTTTGGATTGCTGGTACAGATGCAAAAGGGAAAACGGATTACCGTAATTTAGATGG TAAAATGCCAATTGGATTAGTAATTGGAAGTGAAGGAAAAGGTATGAGCCGTATTATTGGTGAAAAATGTGATTTCTTAA TTACTTTACCGATGGTTGGTAAAGTTACATCCTTAAATGCTTCAGTGGCCGCAAGTTTGTTAATGTATGAGGTATATCGT AAACGTAACGAAATTGGTAAATAA
Upstream 100 bases:
>100_bases TGATTGGCTATCATCACTTATTAAATAATCGTGAAAGATTAGACGAAATTGTATATAAGGCAATTGCTGTTTTAGAAGAA AAGGAAGGGGGCACATCATC
Downstream 100 bases:
>100_bases AAAATGAACGATATTTTAATCGTTGACGGTTACAACATTATTGGAGCTTGGGGAGACTTGAAAAAACTACGGGATGTAGA TTTGCAATCATCAAGAGATG
Product: RNA methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSSEYIIGRNPVIEALRSGRDINKIWIAEGAAKGQVQIVLALAKENKIILQHAPKKKLDQLVEGNHQGVIAQVAAYQYAE LEDLFKVAEKRNEDPFFLILDEIEDPHNLGSIMRTADATGAHGIIIPKRRAVGLTASVAKASTGAIEYIPVARVTNLSRT IDELKERGLWIAGTDAKGKTDYRNLDGKMPIGLVIGSEGKGMSRIIGEKCDFLITLPMVGKVTSLNASVAASLLMYEVYR KRNEIGK
Sequences:
>Translated_247_residues MSSEYIIGRNPVIEALRSGRDINKIWIAEGAAKGQVQIVLALAKENKIILQHAPKKKLDQLVEGNHQGVIAQVAAYQYAE LEDLFKVAEKRNEDPFFLILDEIEDPHNLGSIMRTADATGAHGIIIPKRRAVGLTASVAKASTGAIEYIPVARVTNLSRT IDELKERGLWIAGTDAKGKTDYRNLDGKMPIGLVIGSEGKGMSRIIGEKCDFLITLPMVGKVTSLNASVAASLLMYEVYR KRNEIGK >Mature_246_residues SSEYIIGRNPVIEALRSGRDINKIWIAEGAAKGQVQIVLALAKENKIILQHAPKKKLDQLVEGNHQGVIAQVAAYQYAEL EDLFKVAEKRNEDPFFLILDEIEDPHNLGSIMRTADATGAHGIIIPKRRAVGLTASVAKASTGAIEYIPVARVTNLSRTI DELKERGLWIAGTDAKGKTDYRNLDGKMPIGLVIGSEGKGMSRIIGEKCDFLITLPMVGKVTSLNASVAASLLMYEVYRK RNEIGK
Specific function: Unknown
COG id: COG0566
COG function: function code J; rRNA methylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RNA methyltransferase TrmH family [H]
Homologues:
Organism=Homo sapiens, GI40068479, Length=259, Percent_Identity=27.027027027027, Blast_Score=99, Evalue=4e-21, Organism=Escherichia coli, GI1790623, Length=248, Percent_Identity=39.1129032258064, Blast_Score=173, Evalue=9e-45, Organism=Escherichia coli, GI1790083, Length=159, Percent_Identity=30.188679245283, Blast_Score=86, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17555908, Length=258, Percent_Identity=29.4573643410853, Blast_Score=100, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6324775, Length=165, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004441 - InterPro: IPR001537 - InterPro: IPR013123 [H]
Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 27008; Mature: 26877
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEYIIGRNPVIEALRSGRDINKIWIAEGAAKGQVQIVLALAKENKIILQHAPKKKLDQ CCCCEEECCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEEECCCEEEEECCCHHHHHH LVEGNHQGVIAQVAAYQYAELEDLFKVAEKRNEDPFFLILDEIEDPHNLGSIMRTADATG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCC AHGIIIPKRRAVGLTASVAKASTGAIEYIPVARVTNLSRTIDELKERGLWIAGTDAKGKT CCEEEEECCCCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCC DYRNLDGKMPIGLVIGSEGKGMSRIIGEKCDFLITLPMVGKVTSLNASVAASLLMYEVYR CHHCCCCCCCEEEEECCCCCCHHHHHCCCCCEEEECCCCCCEECCCHHHHHHHHHHHHHH KRNEIGK HHHHCCC >Mature Secondary Structure SSEYIIGRNPVIEALRSGRDINKIWIAEGAAKGQVQIVLALAKENKIILQHAPKKKLDQ CCCEEECCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEEECCCEEEEECCCHHHHHH LVEGNHQGVIAQVAAYQYAELEDLFKVAEKRNEDPFFLILDEIEDPHNLGSIMRTADATG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCC AHGIIIPKRRAVGLTASVAKASTGAIEYIPVARVTNLSRTIDELKERGLWIAGTDAKGKT CCEEEEECCCCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCC DYRNLDGKMPIGLVIGSEGKGMSRIIGEKCDFLITLPMVGKVTSLNASVAASLLMYEVYR CHHCCCCCCCEEEEECCCCCCHHHHHCCCCCEEEECCCCCCEECCCHHHHHHHHHHHHHH KRNEIGK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 7510287; 3145906 [H]