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The map label for this gene is yabM [H]

Identifier: 49183089

GI number: 49183089

Start: 58958

End: 60559

Strand: Direct

Name: yabM [H]

Synonym: BAS0054

Alternate gene names: 49183089

Gene position: 58958-60559 (Clockwise)

Preceding gene: 49183088

Following gene: 49183090

Centisome position: 1.13

GC content: 34.83

Gene sequence:

>1602_bases
ATGGAATCGAAGAAGTATCAAGCCTTTTGGCGTGGGGCTATTATATTAACAATCGCAAGTTTTGTTACAAAGGTATTAAG
CGCTTTTTACCGTATTCCATATCAAAATATAGCGGGTGATATTGGTTTTTATATTTACCAACAAATATATCCGTTTTATG
GATTTTGTTTAATTTTAGCTACTTATGGGTTCCCCATTATAATTTCAAAAATGGTTGCGGAACGATTAGAACGAGGGAAA
AAACAAGAAGCAGAAGAAATTATTTGTGTATCTTTTTGGTTTTTATTAGGAATTGGTTTCATAGGATTTTTTACATTGTT
CTTTGGTGCCGAAGTAATTGCGACAGCCATGGGCGATATACACTTAGATAAGCTATTACGTGTTATTTCCTTTTCATTCA
TATTGATGCCGTTTTTATCTGTAGCAAGAGGATATTTCCAGGGGTTCAATAATATGGTGCCAACAGCTGTGTCGCAAGTG
ATAGAGCAAACGATTCGTGTTTCTATTATTGTATTTTTATCCCTATTCCTAATTGCTCATGAATTTGATTTATATACAGT
TGGTGCTGGTGCTATGCTAGGTTCAATCGCAGGTGGACTGATTGGGATTATCGTACTTATACTTTATATGCGTCATGACT
TTCGTTCTATATTCTTCAAAAGTGTAAAGAGGATTAAAGGGAAAAAGAAGATTATTAAAATCCTGTTTTGGCAGGGGTTA
GCGATTTGTGTTAGTAACTTAGTGCTTATTTTTATACAAATGGCTGATTCTGTTTCTTTCTATTCTTTACTTATTGGAGC
AGGAGAGCCGGCTGAAAGTGCAAAAGTGTTAAAAGGTGTTTATGACAGAAGTATCCCGCTTATGCAATTAGGTACTGTCG
TGACAACTTCTTTCTCGTTGTCGCTTATTCCAATTATTACGGCAGCGAAGGAAAGAGGAGATCTTACCTTTATTCGAGAA
AAGGTAAGGTTAGCAATGAAAATAACGTTTGTTATCGGATTTGCAGCGGCTATTGGATTAACTTGTATTATCCAGCCTAC
GAATATTATGTTGTTTGAAAACAGTGATGGGTCAGATGTTTTATCCATTTTATCTTTATCTATTTTATTTAGTTCATTGT
CAATTACAACCGCTTCTATTTTGCAAGGGTTAGGACAAACATTAAAACCAGCAATATTTGTTGTATTTGGAGGTTGTTTG
AAGCTAGTTTTAAACTATATATTAATGCCGTATTTCGGTGCGAAGGGAGCCGCAATTGCAACTTTAGTTGCATTAATTGT
AATTTCCGTATTAAATAGTATGTTACTTATGCGGGCTGTATCGGAATCGCTTATCGATAAACGGAATATGTTAGGTATAG
TTATTAGTGGTTTCAGTATGGGATTTGTATTAATAATGTTTATGCGTGTATTGCAAATGTCTGGATTAGTAATGGATACA
AGTCATAGAGGTGTTGCAACATTTGAGGCGTTGTTAGGTGTAGCCATCGGCGGATTGGCATATATGTTTTTAATTTTAAA
ATTACGTGTATTTACGAAAGCGGAAATAGGAACGGTTATGAAAAAAGAGAAAAAAGAAGGTTCATTGAAGAAGAGTGGAT
AG

Upstream 100 bases:

>100_bases
GCGTTGCACGAACGTATTCTTACTTGTGTAGGTGAGTAAGCTTGTCCTTTTCTTTATGATATAATACGAGGGGTGAGAAT
AGAAAAAGGAGTTTTCTTGT

Downstream 100 bases:

>100_bases
AGGTGGCAGGTTGTGAGTGGAATCATTACTATTTTAGGATTAGGTGCTGGTGAATTAGATCAGTTAACGATGGGTGTATA
TCGAAAAATAAAAGAAGCAG

Product: stage V sporulation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMVAERLERGK
KQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDIHLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQV
IEQTIRVSIIVFLSLFLIAHEFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIIKILFWQGL
AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSLSLIPIITAAKERGDLTFIRE
KVRLAMKITFVIGFAAAIGLTCIIQPTNIMLFENSDGSDVLSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGCL
KLVLNYILMPYFGAKGAAIATLVALIVISVLNSMLLMRAVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT
SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG

Sequences:

>Translated_533_residues
MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMVAERLERGK
KQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDIHLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQV
IEQTIRVSIIVFLSLFLIAHEFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIIKILFWQGL
AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSLSLIPIITAAKERGDLTFIRE
KVRLAMKITFVIGFAAAIGLTCIIQPTNIMLFENSDGSDVLSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGCL
KLVLNYILMPYFGAKGAAIATLVALIVISVLNSMLLMRAVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT
SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG
>Mature_533_residues
MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMVAERLERGK
KQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDIHLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQV
IEQTIRVSIIVFLSLFLIAHEFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIIKILFWQGL
AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSLSLIPIITAAKERGDLTFIRE
KVRLAMKITFVIGFAAAIGLTCIIQPTNIMLFENSDGSDVLSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGCL
KLVLNYILMPYFGAKGAAIATLVALIVISVLNSMLLMRAVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT
SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 58672; Mature: 58672

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure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CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]