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The map label for this gene is recR

Identifier: 49183059

GI number: 49183059

Start: 27568

End: 28164

Strand: Direct

Name: recR

Synonym: BAS0023

Alternate gene names: 49183059

Gene position: 27568-28164 (Clockwise)

Preceding gene: 49183058

Following gene: 49183060

Centisome position: 0.53

GC content: 40.03

Gene sequence:

>597_bases
ATGCATTATCCAGAACCAATATCAAAACTAATTGATAGTTTTATGAAATTGCCAGGAATCGGACCGAAAACAGCGGTTCG
ATTGGCATTTTTCGTATTAGATATGAAAGAAGATGATGTGTTAGGTTTTGCAAAAGCACTTGTAAATGCAAAGCGAGACT
TAGCGTATTGTTCCGTATGTGGGCATATTACTGACCGTGACCCTTGTTATATTTGTAACGATTCACATCGAGATCAATCA
GTGGTTTGTGTCGTACAAGAACCGAAAGATGTAATCGCGATGGAAAAGATGAAAGAGTATCAAGGTGTATATCATGTGTT
ACGTGGTGCTATCTCTCCAATGGGGGGAATTGGACCAGAAGACATTAATATCCCGCAGCTTTTAAAGCGACTGCACGATG
AAACGGTACAAGAAGTAATATTAGCAACAAATCCTAATATTGAAGGGGAAGCTACAGCGATGTATATATCCCGCCTCTTA
AAGCCGACAGGTATTAAAGTAACTCGTATTGCACATGGTCTGCCGGTTGGTGGAGATTTAGAATATGCAGATGAAGTGAC
ACTGTCGAAAGCGTTAGAAGGTCGTAGAGAAGTATAA

Upstream 100 bases:

>100_bases
ATGCACTTAAAAAAGCTGATGAACTTTCAAACTCTACAATGGGTAAATTTACAAAAGGCTTAAACTTACCGGGTGGAATG
TTCTAGGAGGATATTGATAT

Downstream 100 bases:

>100_bases
GAGGAGAAACAAAAATGTTCTTTCAAAAAAAGGGTAAATTGCGTAAAGAGTATGATGATAATCTAATTGTACTATTAGAA
AAAGTGAAGAATGAATGGTT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MHYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGHITDRDPCYICNDSHRDQS
VVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMGGIGPEDINIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLL
KPTGIKVTRIAHGLPVGGDLEYADEVTLSKALEGRREV

Sequences:

>Translated_198_residues
MHYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGHITDRDPCYICNDSHRDQS
VVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMGGIGPEDINIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLL
KPTGIKVTRIAHGLPVGGDLEYADEVTLSKALEGRREV
>Mature_198_residues
MHYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGHITDRDPCYICNDSHRDQS
VVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMGGIGPEDINIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLL
KPTGIKVTRIAHGLPVGGDLEYADEVTLSKALEGRREV

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=42.4870466321244, Blast_Score=175, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_BACAA (C3P9H0)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002864676.1
- ProteinModelPortal:   C3P9H0
- SMR:   C3P9H0
- EnsemblBacteria:   EBBACT00000128474
- GeneID:   7849059
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_0028
- GeneTree:   EBGT00050000001138
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21905; Mature: 21905

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVC
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GHITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMGGIGPE
CCCCCCCCEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DINIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCC
EYADEVTLSKALEGRREV
CHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVC
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GHITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMGGIGPE
CCCCCCCCEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DINIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCC
EYADEVTLSKALEGRREV
CHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA