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The map label for this gene is ybhR [H]

Identifier: 46447520

GI number: 46447520

Start: 2247817

End: 2248926

Strand: Reverse

Name: ybhR [H]

Synonym: pc1886

Alternate gene names: 46447520

Gene position: 2248926-2247817 (Counterclockwise)

Preceding gene: 46447521

Following gene: 46447519

Centisome position: 93.14

GC content: 34.86

Gene sequence:

>1110_bases
ATGATTGATCGTATTATAGCTTTAATTATTAAAGAACTTTTAGCTGTTTGGCGAGATAAAAAGAGTCGATTCATTTTAAT
TGTTCCTCCCCTTATTCAGCTATTTGTTTTTGCACTCGCTGGCACATTAGAAGTAAAAAATGTACCGATCGGCATTCTCA
ATCTTGATAGGGGACCATCCTCATTTGAATTATTACAACGATTTCATGATTCGCGTACCTTTACTCCTATTTATTACCTG
AAATCTATCCATGAAATTAAAGAACTCCTAGATAAGCAAGAAGTGATGTTAGTCATTCACTTAGATGAACAATTTTCTCG
CAACTTGAAAAAACAGCAAGCAACAGACGTTCAATTGATTCTGGATGGAAGAAAATCCAATACAGCTCAAATTGTTCAAG
GGTATGTCGCAAGAGTGATTGATCAATTTAATCACGATTATGCTCAACAGGCGGGATTTTCAAATTCTTCTTCTGAGCTC
ATAATGCGTCATTGGTTTAATCCCAATTTACTGTATGAATGGTTTAATGTTCCCAATTTGATGGGAATTTTAACAATGTT
GGTGGGGTTAATTGTGACAGCTTTATCTGTCGCTCGAGAAAGAGAGTTAGGGACGTTTGATCAGTTACTCGTTTCTCCTC
TTCAACCCATGGAAATTTTGTTGGGTAAAACAATTCCTGCTTTATTAATTGGGATAATAGAAGGAACAATAATCCTTTTA
GCCGCAGTTTTTATTTTTCAAATTCCTTTTACAGGTTCTGTCGCGATTTTATATTTAAGCTTATTTATATTTATTAGTGC
GGTAGTAGGGGTAGGGTTATTTATTTCTTCTCTTTGTATGACCCAGCAGCAAGCCATTTTAGGAACATTTGTTTTTATGA
GTCCATCTGTGATGTTATCTGGATTTGCTACACCGATTGAAAATATGCCATCTTGGTTACAAACCGTGACATTACTTAAC
CCTCTTCGCTATTTTTTAGTGATTGTGAAAGGGGTTTTTTTGAAAAACATGCCTTTAAATATTGTTTTTCAAAATTTATG
GCCTATGTTTTTGATGGCTATTTTTACATTAGCTTGCGCAAAGTGGCTTTTTAAACGCCGTCTAACTTAG

Upstream 100 bases:

>100_bases
ACTTATCATTCCCAATACAGGAGTGATGTTACTGATTGGCTGTGTGATTTATTTGTTAACTGCTAAAAAAACAGTGAAAA
GACTCGATTAGGAAAAACGA

Downstream 100 bases:

>100_bases
GCTTTAATAATAAATGATTTACTGATAAATTGCGTTTAGGCCGATTGTTTGTTTTTCTTTTATTTATAAAAGAGAAAAAA
TTGGCTCTTGCATTTTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MIDRIIALIIKELLAVWRDKKSRFILIVPPLIQLFVFALAGTLEVKNVPIGILNLDRGPSSFELLQRFHDSRTFTPIYYL
KSIHEIKELLDKQEVMLVIHLDEQFSRNLKKQQATDVQLILDGRKSNTAQIVQGYVARVIDQFNHDYAQQAGFSNSSSEL
IMRHWFNPNLLYEWFNVPNLMGILTMLVGLIVTALSVARERELGTFDQLLVSPLQPMEILLGKTIPALLIGIIEGTIILL
AAVFIFQIPFTGSVAILYLSLFIFISAVVGVGLFISSLCMTQQQAILGTFVFMSPSVMLSGFATPIENMPSWLQTVTLLN
PLRYFLVIVKGVFLKNMPLNIVFQNLWPMFLMAIFTLACAKWLFKRRLT

Sequences:

>Translated_369_residues
MIDRIIALIIKELLAVWRDKKSRFILIVPPLIQLFVFALAGTLEVKNVPIGILNLDRGPSSFELLQRFHDSRTFTPIYYL
KSIHEIKELLDKQEVMLVIHLDEQFSRNLKKQQATDVQLILDGRKSNTAQIVQGYVARVIDQFNHDYAQQAGFSNSSSEL
IMRHWFNPNLLYEWFNVPNLMGILTMLVGLIVTALSVARERELGTFDQLLVSPLQPMEILLGKTIPALLIGIIEGTIILL
AAVFIFQIPFTGSVAILYLSLFIFISAVVGVGLFISSLCMTQQQAILGTFVFMSPSVMLSGFATPIENMPSWLQTVTLLN
PLRYFLVIVKGVFLKNMPLNIVFQNLWPMFLMAIFTLACAKWLFKRRLT
>Mature_369_residues
MIDRIIALIIKELLAVWRDKKSRFILIVPPLIQLFVFALAGTLEVKNVPIGILNLDRGPSSFELLQRFHDSRTFTPIYYL
KSIHEIKELLDKQEVMLVIHLDEQFSRNLKKQQATDVQLILDGRKSNTAQIVQGYVARVIDQFNHDYAQQAGFSNSSSEL
IMRHWFNPNLLYEWFNVPNLMGILTMLVGLIVTALSVARERELGTFDQLLVSPLQPMEILLGKTIPALLIGIIEGTIILL
AAVFIFQIPFTGSVAILYLSLFIFISAVVGVGLFISSLCMTQQQAILGTFVFMSPSVMLSGFATPIENMPSWLQTVTLLN
PLRYFLVIVKGVFLKNMPLNIVFQNLWPMFLMAIFTLACAKWLFKRRLT

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=368, Percent_Identity=45.3804347826087, Blast_Score=342, Evalue=2e-95,
Organism=Escherichia coli, GI1787011, Length=347, Percent_Identity=32.5648414985591, Blast_Score=165, Evalue=5e-42,
Organism=Escherichia coli, GI48994943, Length=368, Percent_Identity=25.5434782608696, Blast_Score=131, Evalue=7e-32,
Organism=Escherichia coli, GI226510979, Length=367, Percent_Identity=26.158038147139, Blast_Score=119, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24650855, Length=361, Percent_Identity=22.1606648199446, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24650853, Length=355, Percent_Identity=21.9718309859155, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41895; Mature: 41895

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRIIALIIKELLAVWRDKKSRFILIVPPLIQLFVFALAGTLEVKNVPIGILNLDRGPS
CHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCEECCCCEEEEECCCCCC
SFELLQRFHDSRTFTPIYYLKSIHEIKELLDKQEVMLVIHLDEQFSRNLKKQQATDVQLI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCCCEEE
LDGRKSNTAQIVQGYVARVIDQFNHDYAQQAGFSNSSSELIMRHWFNPNLLYEWFNVPNL
EECCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHCCCHH
MGILTMLVGLIVTALSVARERELGTFDQLLVSPLQPMEILLGKTIPALLIGIIEGTIILL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHH
AAVFIFQIPFTGSVAILYLSLFIFISAVVGVGLFISSLCMTQQQAILGTFVFMSPSVMLS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
GFATPIENMPSWLQTVTLLNPLRYFLVIVKGVFLKNMPLNIVFQNLWPMFLMAIFTLACA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KWLFKRRLT
HHHHHHCCC
>Mature Secondary Structure
MIDRIIALIIKELLAVWRDKKSRFILIVPPLIQLFVFALAGTLEVKNVPIGILNLDRGPS
CHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCEECCCCEEEEECCCCCC
SFELLQRFHDSRTFTPIYYLKSIHEIKELLDKQEVMLVIHLDEQFSRNLKKQQATDVQLI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCCCEEE
LDGRKSNTAQIVQGYVARVIDQFNHDYAQQAGFSNSSSELIMRHWFNPNLLYEWFNVPNL
EECCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHCCCHH
MGILTMLVGLIVTALSVARERELGTFDQLLVSPLQPMEILLGKTIPALLIGIIEGTIILL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHH
AAVFIFQIPFTGSVAILYLSLFIFISAVVGVGLFISSLCMTQQQAILGTFVFMSPSVMLS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
GFATPIENMPSWLQTVTLLNPLRYFLVIVKGVFLKNMPLNIVFQNLWPMFLMAIFTLACA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KWLFKRRLT
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]