Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is gutQ [C]
Identifier: 46447416
GI number: 46447416
Start: 2136836
End: 2137795
Strand: Reverse
Name: gutQ [C]
Synonym: pc1782
Alternate gene names: 46447416
Gene position: 2137795-2136836 (Counterclockwise)
Preceding gene: 46447418
Following gene: 46447413
Centisome position: 88.54
GC content: 36.67
Gene sequence:
>960_bases ATGCTGAAAGAAATACTTGATAAGCAACATCTTTATACCAATCATTACTTTGAAACGTTGGATCTAATTGCTATAGAAAA ATTAGTGGAACTTCTACTAGAAACTGAAAAATCTATTTTTTTTACCGGTGTTGGTAAAAGTGGATTAGTCGCTAAAAAAA TTGCTCTTACAATGGTTTCTACGGGAACCAAAGCTTTATATCTCTCACCAACAGATGCTGTTCATGGAGATATTGGTATT GTTTCTCAGGATGATATCTTTATTATGTTAAGTAAGAGTGGAGAAAGCGATGAACTGCTGAATTTAGTACCGCCTATTCG TAATAAAGGGGGCATCTTAGTCGCAGTTGTTTGTAACCCACAATCTCGTTTAGCAGCCGCTTGTCATTATGTGATCACTC TGCCTTTTCAAGAGGAGCTTTGCCCTTTTGATATGGCACCCACGATGTCAACGATTTTCCAAGGGCTTTTTGGAGACTTA GTGACTGCTGCACTAATGCGTAGAAAAAATTTTAGTTTAAATGATTATGCATTAAATCATCCTTCAGGCCGAATTGGAAA ACGAATGACGTTGAAGGTTAAAGATATTATGCTCACTGGAGAAAAAGTTCCTATTTGTTATCCTCAAGATCAATTAACAA ATGTTCTCGTTGAATTATCCAACAAACGTTGCGGATGTATTCTTGTGGTTGATCGCGATCATCGATTACTTGGCATTTTT ACAGATGGTGATTTAAGGAGAATGTTGCAAAAAGTGGGAGGGAAAGTACTAGAATCTTCTATGATTGAAATCATGACACC CAATCCTCGGTCAATCGAGTCAGAACTTCTGGCTTATGAAGCCATGAAATTGATGGAAGCTGACTATTGTAAAAGAATTT CTGTTTTTCCTGTGCTTAACCTTGAACAGCAAGTAATTGGCTTGCTTCATATTCATGATCTTATTCAAACAGGGTTATAA
Upstream 100 bases:
>100_bases CTGCCATCACAAATTCCCATAAATTTATTTTTAAATAATCAAACTTGAGACTAATCCGTTCGTTGTTTAAAATCCAATCA AAACCTTACTGAAAGTAACT
Downstream 100 bases:
>100_bases TCTAAATTTATTGCAAAAAACTTCAACTCTCAGTTAATAACCAAGTTTGTAGCTCATCGAAAGAGCGTTGAGTGAAATAA GGAAAGAAAATATCTGCTTT
Product: putative Gut Q protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLKEILDKQHLYTNHYFETLDLIAIEKLVELLLETEKSIFFTGVGKSGLVAKKIALTMVSTGTKALYLSPTDAVHGDIGI VSQDDIFIMLSKSGESDELLNLVPPIRNKGGILVAVVCNPQSRLAAACHYVITLPFQEELCPFDMAPTMSTIFQGLFGDL VTAALMRRKNFSLNDYALNHPSGRIGKRMTLKVKDIMLTGEKVPICYPQDQLTNVLVELSNKRCGCILVVDRDHRLLGIF TDGDLRRMLQKVGGKVLESSMIEIMTPNPRSIESELLAYEAMKLMEADYCKRISVFPVLNLEQQVIGLLHIHDLIQTGL
Sequences:
>Translated_319_residues MLKEILDKQHLYTNHYFETLDLIAIEKLVELLLETEKSIFFTGVGKSGLVAKKIALTMVSTGTKALYLSPTDAVHGDIGI VSQDDIFIMLSKSGESDELLNLVPPIRNKGGILVAVVCNPQSRLAAACHYVITLPFQEELCPFDMAPTMSTIFQGLFGDL VTAALMRRKNFSLNDYALNHPSGRIGKRMTLKVKDIMLTGEKVPICYPQDQLTNVLVELSNKRCGCILVVDRDHRLLGIF TDGDLRRMLQKVGGKVLESSMIEIMTPNPRSIESELLAYEAMKLMEADYCKRISVFPVLNLEQQVIGLLHIHDLIQTGL >Mature_319_residues MLKEILDKQHLYTNHYFETLDLIAIEKLVELLLETEKSIFFTGVGKSGLVAKKIALTMVSTGTKALYLSPTDAVHGDIGI VSQDDIFIMLSKSGESDELLNLVPPIRNKGGILVAVVCNPQSRLAAACHYVITLPFQEELCPFDMAPTMSTIFQGLFGDL VTAALMRRKNFSLNDYALNHPSGRIGKRMTLKVKDIMLTGEKVPICYPQDQLTNVLVELSNKRCGCILVVDRDHRLLGIF TDGDLRRMLQKVGGKVLESSMIEIMTPNPRSIESELLAYEAMKLMEADYCKRISVFPVLNLEQQVIGLLHIHDLIQTGL
Specific function: Unknown
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1789588, Length=317, Percent_Identity=33.4384858044164, Blast_Score=197, Evalue=6e-52, Organism=Escherichia coli, GI87082151, Length=293, Percent_Identity=32.4232081911263, Blast_Score=185, Evalue=4e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR004800 - InterPro: IPR001347 [H]
Pfam domain/function: PF00571 CBS; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 35550; Mature: 35550
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKEILDKQHLYTNHYFETLDLIAIEKLVELLLETEKSIFFTGVGKSGLVAKKIALTMVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHEEEEEE TGTKALYLSPTDAVHGDIGIVSQDDIFIMLSKSGESDELLNLVPPIRNKGGILVAVVCNP CCCEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHCCCCCCCCCCEEEEEEECC QSRLAAACHYVITLPFQEELCPFDMAPTMSTIFQGLFGDLVTAALMRRKNFSLNDYALNH HHHHHHHEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC PSGRIGKRMTLKVKDIMLTGEKVPICYPQDQLTNVLVELSNKRCGCILVVDRDHRLLGIF CCCCCCCEEEEEEEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEE TDGDLRRMLQKVGGKVLESSMIEIMTPNPRSIESELLAYEAMKLMEADYCKRISVFPVLN ECHHHHHHHHHHCHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECC LEQQVIGLLHIHDLIQTGL CHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKEILDKQHLYTNHYFETLDLIAIEKLVELLLETEKSIFFTGVGKSGLVAKKIALTMVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHEEEEEE TGTKALYLSPTDAVHGDIGIVSQDDIFIMLSKSGESDELLNLVPPIRNKGGILVAVVCNP CCCEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHCCCCCCCCCCEEEEEEECC QSRLAAACHYVITLPFQEELCPFDMAPTMSTIFQGLFGDLVTAALMRRKNFSLNDYALNH HHHHHHHEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC PSGRIGKRMTLKVKDIMLTGEKVPICYPQDQLTNVLVELSNKRCGCILVVDRDHRLLGIF CCCCCCCEEEEEEEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEE TDGDLRRMLQKVGGKVLESSMIEIMTPNPRSIESELLAYEAMKLMEADYCKRISVFPVLN ECHHHHHHHHHHCHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECC LEQQVIGLLHIHDLIQTGL CHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]