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The map label for this gene is ybeQ [H]

Identifier: 46447295

GI number: 46447295

Start: 1999452

End: 2000423

Strand: Reverse

Name: ybeQ [H]

Synonym: pc1661

Alternate gene names: 46447295

Gene position: 2000423-1999452 (Counterclockwise)

Preceding gene: 46447297

Following gene: 46447294

Centisome position: 82.85

GC content: 34.57

Gene sequence:

>972_bases
TTGGCTTATTTAGCTTTCAAAGACAAAAAACAAGCAAGAATAAAAGTTTTATTAGTTCTAGCGAAAGTGGTGGGGGTCAT
TATGAACGCAGTGGATTTTTATTGCGGTCAATACTTAGTCAATCCAGTCAATCAATTGATACTAAGTCCCTTTCCAACTG
AGCTTAATAAACCTCTGTTGGTAAGACTGTCAATGCTTTATCATGCGACTGTGGTGTTAGTTAATTCACAAATGACTTCA
ATCTTTTACTTCTTACTTGGTAGAGTCAATAATTTTATTTCGTGTGCATGTTCTGAACGAAATACAGCTTTAGCGGTGAA
AATTTTGGCCAGTCAAAAAAATGCTCGAGCTCAAAATTATTTAGGTTACTTATATGAGTCAGGCAAGGGAGTTAAACAAA
ATAACGAAAAAGCTTTTTATTACTATCGATTAGCTGCCCATCAAAATATTACGAACGCGCAACTTAAAATTGGTCTGATG
TATTTAGAAGGAAAGGGAATTACACAATCGGATGAGCAACAAGCCGTTTTTTATTTAAAACTCGCTAGTGATAATGGTTC
TTTAGAGGCGAGATATCGACTTTCGTTGCTATATTTAAGCGGGCATGGAGTTGAAAAAAATGAAAAGAAGGCTTTACAGC
TTTGTCAGTCTGCCGCTAATAATGGATACATGTTGGCTCAATTTAAACTTGCCAAGAGTTATGAATATGGCTTAAATGGT
GTCTCTAAAAATCAGCAAAAAGCTGCAGAATATTATAAAGGAGCTGCAGATCAGGGGCATCTTGAAGCAAAACATCGTTA
TGGCATTTTCTGTTGTTTAGGACAAGGTTGTTCACAAAATAATCAAGAGGCAATTAAATATTTGCAGTCTGCCTATGATT
TAGGATATTTAGGATCTAAAATTTACCTTGATAAAATTCTCAGTTATGAGAATAGACTGAGAATATATCATTATTGGAAT
ATGAGAGAATAA

Upstream 100 bases:

>100_bases
ATTTGCAAATAAATCAATGCTTTCGATCTCAAAAATTTGGTCATCAATACGTATTATTAGAATATGTGTAATTCAAAACA
GGCTTTGGTCTTAATTTTTT

Downstream 100 bases:

>100_bases
GATTAAATGGACTATCGAACAGAAAAAGACACCTTAGGAGAAGTTAGAGTTTCTGCAGACTGTTATTATGGAGCTCAAAC
GAAGCGTTCCTACGATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MAYLAFKDKKQARIKVLLVLAKVVGVIMNAVDFYCGQYLVNPVNQLILSPFPTELNKPLLVRLSMLYHATVVLVNSQMTS
IFYFLLGRVNNFISCACSERNTALAVKILASQKNARAQNYLGYLYESGKGVKQNNEKAFYYYRLAAHQNITNAQLKIGLM
YLEGKGITQSDEQQAVFYLKLASDNGSLEARYRLSLLYLSGHGVEKNEKKALQLCQSAANNGYMLAQFKLAKSYEYGLNG
VSKNQQKAAEYYKGAADQGHLEAKHRYGIFCCLGQGCSQNNQEAIKYLQSAYDLGYLGSKIYLDKILSYENRLRIYHYWN
MRE

Sequences:

>Translated_323_residues
MAYLAFKDKKQARIKVLLVLAKVVGVIMNAVDFYCGQYLVNPVNQLILSPFPTELNKPLLVRLSMLYHATVVLVNSQMTS
IFYFLLGRVNNFISCACSERNTALAVKILASQKNARAQNYLGYLYESGKGVKQNNEKAFYYYRLAAHQNITNAQLKIGLM
YLEGKGITQSDEQQAVFYLKLASDNGSLEARYRLSLLYLSGHGVEKNEKKALQLCQSAANNGYMLAQFKLAKSYEYGLNG
VSKNQQKAAEYYKGAADQGHLEAKHRYGIFCCLGQGCSQNNQEAIKYLQSAYDLGYLGSKIYLDKILSYENRLRIYHYWN
MRE
>Mature_322_residues
AYLAFKDKKQARIKVLLVLAKVVGVIMNAVDFYCGQYLVNPVNQLILSPFPTELNKPLLVRLSMLYHATVVLVNSQMTSI
FYFLLGRVNNFISCACSERNTALAVKILASQKNARAQNYLGYLYESGKGVKQNNEKAFYYYRLAAHQNITNAQLKIGLMY
LEGKGITQSDEQQAVFYLKLASDNGSLEARYRLSLLYLSGHGVEKNEKKALQLCQSAANNGYMLAQFKLAKSYEYGLNGV
SKNQQKAAEYYKGAADQGHLEAKHRYGIFCCLGQGCSQNNQEAIKYLQSAYDLGYLGSKIYLDKILSYENRLRIYHYWNM
RE

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=196, Percent_Identity=30.6122448979592, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI151301150, Length=206, Percent_Identity=31.0679611650485, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI87081769, Length=170, Percent_Identity=32.3529411764706, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17563256, Length=199, Percent_Identity=31.1557788944724, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI21355295, Length=254, Percent_Identity=26.7716535433071, Blast_Score=88, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 36645; Mature: 36514

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYLAFKDKKQARIKVLLVLAKVVGVIMNAVDFYCGQYLVNPVNQLILSPFPTELNKPLL
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
VRLSMLYHATVVLVNSQMTSIFYFLLGRVNNFISCACSERNTALAVKILASQKNARAQNY
HHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCCCCHHHH
LGYLYESGKGVKQNNEKAFYYYRLAAHQNITNAQLKIGLMYLEGKGITQSDEQQAVFYLK
HHHHEECCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEE
LASDNGSLEARYRLSLLYLSGHGVEKNEKKALQLCQSAANNGYMLAQFKLAKSYEYGLNG
EECCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHCCCC
VSKNQQKAAEYYKGAADQGHLEAKHRYGIFCCLGQGCSQNNQEAIKYLQSAYDLGYLGSK
CCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCH
IYLDKILSYENRLRIYHYWNMRE
HHHHHHHCCCCCEEEEEEECCCC
>Mature Secondary Structure 
AYLAFKDKKQARIKVLLVLAKVVGVIMNAVDFYCGQYLVNPVNQLILSPFPTELNKPLL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
VRLSMLYHATVVLVNSQMTSIFYFLLGRVNNFISCACSERNTALAVKILASQKNARAQNY
HHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCCCCHHHH
LGYLYESGKGVKQNNEKAFYYYRLAAHQNITNAQLKIGLMYLEGKGITQSDEQQAVFYLK
HHHHEECCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEE
LASDNGSLEARYRLSLLYLSGHGVEKNEKKALQLCQSAANNGYMLAQFKLAKSYEYGLNG
EECCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHCCCC
VSKNQQKAAEYYKGAADQGHLEAKHRYGIFCCLGQGCSQNNQEAIKYLQSAYDLGYLGSK
CCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCH
IYLDKILSYENRLRIYHYWNMRE
HHHHHHHCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]