Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is prsA [H]
Identifier: 46447229
GI number: 46447229
Start: 1909193
End: 1910134
Strand: Reverse
Name: prsA [H]
Synonym: pc1595
Alternate gene names: 46447229
Gene position: 1910134-1909193 (Counterclockwise)
Preceding gene: 46447232
Following gene: 46447228
Centisome position: 79.11
GC content: 38.96
Gene sequence:
>942_bases ATGTCCTTTTGCCACCAACCACTATTATTTGCTGGATCTTCACATCCCATTCTTGCAACTGAAATTGCCCAACAACTCAA AATTTCTCTTGGTCAAATGCAGTTAAGCAAGTTTCCTGATGGGGAAATAGGGGTGCAGCTTTTGGAGAGTGTGCGTGGTA AAGATACTTTTGTTTTACAATCGATTGCTCTTGATCCCAATTTTTATTTGATGGAATTACTAATTATTGTTGATGCCCTC AAAAGAGCATCAGCGCGAAATATTGTAGCAGTGATTCCTTATTATGGATATTGCCGACAAGACCGTAAAGATAAGTTTGA TGTGTCAATTACAGCGAAACTCGTTGCAAATTTATTGGTAGAAGCCGGCATAACGCGAATTTTGACAATGGATCTTCATG TAGATCAATTGCAAGGGTTTTTTGATATTCCTGTAGATCATCTTAGTGGACGTCAACTATTGATTGATGAATTACAGAAA TTAGATTTGACTAATAGTATCGTTGTAGCTCCCGATATAGGAAGCGTCAAAACAGCTCGAACTTTTGCAAGTCAGCTCAG TGTTGATTTTGCAATCGTTGATAAGCACCGGAAAAGTGCTATAGAAGTTGTAGACTATCACCTAATCGGGGATGTTAACG GAAAAGATGTACTTCTCGCTGACGATATCTGCTCAACTGGAGCGACATTAATGTCAGCAGCGAAAGCATGCCAAGAGAAG GGAGCAAATCGTATTTTTGCTGCATTTACCCACGGTTTACTTGTGGATGATTCAGTTAAGCAGATAGAAAATAGTTTGCT CGAAATAGTATGGATGACGAACACCATTCCTCATACTAAACGGTTAAAAGAAGCTTCTAAGCTTAAAACCGTTTCCATAG CCTCTCTTTTGACTCATGCCATCCAATGCATTGTATCGGATGAGTCCATTTCTTCTTTATAA
Upstream 100 bases:
>100_bases CGGTTCATCGATGGGGTGTAGCCAAGCGGTAAGGCAGCGGTTTTTGGTACCGCCATGCGGAGGTTCGAATCCTTCCACCC CAATGTTATAGGCAATTCAG
Downstream 100 bases:
>100_bases CATATATAAATGTGTGATAAACTTTTTGAAAAAATGACTGAAAAATTTAGTAACGTAAGTTTTAAATAAGAAAAAAATCT ATTTCAAACTATCTTTAGTA
Product: phosphoribosyl pyrophosphate synthetase (PRPP)
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSFCHQPLLFAGSSHPILATEIAQQLKISLGQMQLSKFPDGEIGVQLLESVRGKDTFVLQSIALDPNFYLMELLIIVDAL KRASARNIVAVIPYYGYCRQDRKDKFDVSITAKLVANLLVEAGITRILTMDLHVDQLQGFFDIPVDHLSGRQLLIDELQK LDLTNSIVVAPDIGSVKTARTFASQLSVDFAIVDKHRKSAIEVVDYHLIGDVNGKDVLLADDICSTGATLMSAAKACQEK GANRIFAAFTHGLLVDDSVKQIENSLLEIVWMTNTIPHTKRLKEASKLKTVSIASLLTHAIQCIVSDESISSL
Sequences:
>Translated_313_residues MSFCHQPLLFAGSSHPILATEIAQQLKISLGQMQLSKFPDGEIGVQLLESVRGKDTFVLQSIALDPNFYLMELLIIVDAL KRASARNIVAVIPYYGYCRQDRKDKFDVSITAKLVANLLVEAGITRILTMDLHVDQLQGFFDIPVDHLSGRQLLIDELQK LDLTNSIVVAPDIGSVKTARTFASQLSVDFAIVDKHRKSAIEVVDYHLIGDVNGKDVLLADDICSTGATLMSAAKACQEK GANRIFAAFTHGLLVDDSVKQIENSLLEIVWMTNTIPHTKRLKEASKLKTVSIASLLTHAIQCIVSDESISSL >Mature_312_residues SFCHQPLLFAGSSHPILATEIAQQLKISLGQMQLSKFPDGEIGVQLLESVRGKDTFVLQSIALDPNFYLMELLIIVDALK RASARNIVAVIPYYGYCRQDRKDKFDVSITAKLVANLLVEAGITRILTMDLHVDQLQGFFDIPVDHLSGRQLLIDELQKL DLTNSIVVAPDIGSVKTARTFASQLSVDFAIVDKHRKSAIEVVDYHLIGDVNGKDVLLADDICSTGATLMSAAKACQEKG ANRIFAAFTHGLLVDDSVKQIENSLLEIVWMTNTIPHTKRLKEASKLKTVSIASLLTHAIQCIVSDESISSL
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI28557709, Length=307, Percent_Identity=42.671009771987, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI4506127, Length=307, Percent_Identity=42.0195439739414, Blast_Score=241, Evalue=6e-64, Organism=Homo sapiens, GI4506129, Length=308, Percent_Identity=40.9090909090909, Blast_Score=239, Evalue=2e-63, Organism=Homo sapiens, GI84875539, Length=311, Percent_Identity=40.8360128617363, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI4506133, Length=342, Percent_Identity=35.3801169590643, Blast_Score=202, Evalue=3e-52, Organism=Homo sapiens, GI194018537, Length=328, Percent_Identity=34.4512195121951, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI310128524, Length=141, Percent_Identity=32.6241134751773, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI310115209, Length=141, Percent_Identity=32.6241134751773, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI310118259, Length=141, Percent_Identity=32.6241134751773, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI310119946, Length=141, Percent_Identity=32.6241134751773, Blast_Score=75, Evalue=7e-14, Organism=Escherichia coli, GI1787458, Length=307, Percent_Identity=45.928338762215, Blast_Score=278, Evalue=3e-76, Organism=Caenorhabditis elegans, GI17554704, Length=309, Percent_Identity=41.4239482200647, Blast_Score=245, Evalue=2e-65, Organism=Caenorhabditis elegans, GI25149168, Length=307, Percent_Identity=41.3680781758958, Blast_Score=242, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17554702, Length=307, Percent_Identity=41.3680781758958, Blast_Score=242, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71989924, Length=307, Percent_Identity=41.3680781758958, Blast_Score=241, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17570245, Length=335, Percent_Identity=30.7462686567164, Blast_Score=171, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6321776, Length=307, Percent_Identity=40.0651465798046, Blast_Score=221, Evalue=9e-59, Organism=Saccharomyces cerevisiae, GI6320946, Length=308, Percent_Identity=40.2597402597403, Blast_Score=217, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6319403, Length=309, Percent_Identity=39.8058252427184, Blast_Score=215, Evalue=9e-57, Organism=Saccharomyces cerevisiae, GI6322667, Length=194, Percent_Identity=39.1752577319588, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6324511, Length=106, Percent_Identity=42.4528301886792, Blast_Score=85, Evalue=1e-17, Organism=Drosophila melanogaster, GI21355239, Length=307, Percent_Identity=41.3680781758958, Blast_Score=244, Evalue=7e-65, Organism=Drosophila melanogaster, GI45551540, Length=330, Percent_Identity=38.7878787878788, Blast_Score=232, Evalue=2e-61, Organism=Drosophila melanogaster, GI24651458, Length=351, Percent_Identity=33.048433048433, Blast_Score=188, Evalue=3e-48, Organism=Drosophila melanogaster, GI24651456, Length=351, Percent_Identity=33.048433048433, Blast_Score=188, Evalue=3e-48, Organism=Drosophila melanogaster, GI281362873, Length=351, Percent_Identity=33.048433048433, Blast_Score=188, Evalue=4e-48, Organism=Drosophila melanogaster, GI24651454, Length=351, Percent_Identity=33.048433048433, Blast_Score=188, Evalue=4e-48, Organism=Drosophila melanogaster, GI24651462, Length=193, Percent_Identity=38.860103626943, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI24651464, Length=193, Percent_Identity=38.860103626943, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI45552010, Length=193, Percent_Identity=38.860103626943, Blast_Score=139, Evalue=2e-33,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34358; Mature: 34227
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFCHQPLLFAGSSHPILATEIAQQLKISLGQMQLSKFPDGEIGVQLLESVRGKDTFVLQ CCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEE SIALDPNFYLMELLIIVDALKRASARNIVAVIPYYGYCRQDRKDKFDVSITAKLVANLLV EEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHH EAGITRILTMDLHVDQLQGFFDIPVDHLSGRQLLIDELQKLDLTNSIVVAPDIGSVKTAR HHCHHHEEEEECCHHHHCCEECCCHHHCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHH TFASQLSVDFAIVDKHRKSAIEVVDYHLIGDVNGKDVLLADDICSTGATLMSAAKACQEK HHHHHHCCHHEEHHHHHHHHHHHHEEEEEECCCCCEEEEECCHHHCCHHHHHHHHHHHHC GANRIFAAFTHGLLVDDSVKQIENSLLEIVWMTNTIPHTKRLKEASKLKTVSIASLLTHA CCCEEEHHHHCCEEECHHHHHHHHHHHEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH IQCIVSDESISSL HHHHCCCCHHCCC >Mature Secondary Structure SFCHQPLLFAGSSHPILATEIAQQLKISLGQMQLSKFPDGEIGVQLLESVRGKDTFVLQ CCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEE SIALDPNFYLMELLIIVDALKRASARNIVAVIPYYGYCRQDRKDKFDVSITAKLVANLLV EEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHH EAGITRILTMDLHVDQLQGFFDIPVDHLSGRQLLIDELQKLDLTNSIVVAPDIGSVKTAR HHCHHHEEEEECCHHHHCCEECCCHHHCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHH TFASQLSVDFAIVDKHRKSAIEVVDYHLIGDVNGKDVLLADDICSTGATLMSAAKACQEK HHHHHHCCHHEEHHHHHHHHHHHHEEEEEECCCCCEEEEECCHHHCCHHHHHHHHHHHHC GANRIFAAFTHGLLVDDSVKQIENSLLEIVWMTNTIPHTKRLKEASKLKTVSIASLLTHA CCCEEEHHHHCCEEECHHHHHHHHHHHEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH IQCIVSDESISSL HHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954 [H]