Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
---|---|
Accession | NC_005861 |
Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46447091
Identifier: 46447091
GI number: 46447091
Start: 1732996
End: 1733226
Strand: Reverse
Name: 46447091
Synonym: pc1457
Alternate gene names: NA
Gene position: 1733226-1732996 (Counterclockwise)
Preceding gene: 46447092
Following gene: 46447090
Centisome position: 71.79
GC content: 31.17
Gene sequence:
>231_bases ATGCAAGTTAAACATTTAGTTCAACATGGAAATAGTAAAGCCATTGTCATTGACAAATCAATTTTACAAGCTGCAGGGCT TGACGAAAATTGTTTGTTTCAAATAGTTGTAGATTCAAATACAGGTGTTACTATTCAATCGGTAAAACCAGTAAACAGCA AATTTGAAGAAGCTAAGAAATATGTTTTTAATGAATATGCTGAACTTTTCAAGAGATTGTCTGATCGATGA
Upstream 100 bases:
>100_bases TATATTTACCTATAACGTAATAAAAAAAGATTCCGTTATAACACTTGTATATACTTTAAATTTATAATATAGTAATATTG ATTTATACGAGAGGTGTATT
Downstream 100 bases:
>100_bases TTTTTTTATCTGTTGAAGAGGTGATTTTGATTCATGATCATCTCGTTTCTGAATACGGAGGTCTACATGGTATTAGAGAT ATGGGACTTCTTGTATCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MQVKHLVQHGNSKAIVIDKSILQAAGLDENCLFQIVVDSNTGVTIQSVKPVNSKFEEAKKYVFNEYAELFKRLSDR
Sequences:
>Translated_76_residues MQVKHLVQHGNSKAIVIDKSILQAAGLDENCLFQIVVDSNTGVTIQSVKPVNSKFEEAKKYVFNEYAELFKRLSDR >Mature_76_residues MQVKHLVQHGNSKAIVIDKSILQAAGLDENCLFQIVVDSNTGVTIQSVKPVNSKFEEAKKYVFNEYAELFKRLSDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8582; Mature: 8582
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVKHLVQHGNSKAIVIDKSILQAAGLDENCLFQIVVDSNTGVTIQSVKPVNSKFEEAKK CCCHHHHHCCCCCEEEEEHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHH YVFNEYAELFKRLSDR HHHHHHHHHHHHHCCC >Mature Secondary Structure MQVKHLVQHGNSKAIVIDKSILQAAGLDENCLFQIVVDSNTGVTIQSVKPVNSKFEEAKK CCCHHHHHCCCCCEEEEEHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHH YVFNEYAELFKRLSDR HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA