Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447069
Identifier: 46447069
GI number: 46447069
Start: 1707925
End: 1708692
Strand: Direct
Name: 46447069
Synonym: pc1435
Alternate gene names: NA
Gene position: 1707925-1708692 (Clockwise)
Preceding gene: 46447068
Following gene: 46447070
Centisome position: 70.74
GC content: 37.89
Gene sequence:
>768_bases TTGTTGTCTCGATTCAACAAAAGCAGCGGCCATGAAGCCCATCGGAGGTTTATGGTAAAGCAGCAGTGGATTTTTTTACT TTTCTATACGTTTCCTTGTGTGGCTTCCATGCAAACTGCCAAACAAGCAGGGCAATCTTGGGGAAAGGATCAAGCCTCTT TAGCGTGCGATTCAGGGAAGAAAATTCGGTCTGATGATTTTCTAACGACAGATGAGAAAAAGCAAGCCTTTGATGCGAAA GCAGCTGAAAAGAAAATGAAACAAAGAGATATTCCTTCTTCCGAAACAATCGATTTTTTAACAAGCCAAGAAGTGCAAAA CAACCAAAATCATCGATCCTTTCACGAAGAGGAAAATTTTTTTCAAATTTCAGAAAAGATATTTGCTAATCAAACACCCG AACTTCCAGCTGAAAAGGACAAAGAAGAAGAACAAAAGATCTATACCTGTAAACAGGCGGGTGATCCTTTCATTATCAAT ACAGAAAGAACATTAAAAGTTTCCATTCATCCTTTTCCAGCTCAAGAAGCAAAAATTTGCTTAGGTCATAAGAAAATCGC GATTGTCAAAAAAATTGGAGATTTTCCCACCTCTATCAAAAAATTGGAACAAAGCTATCGAAATGATCCAGCCATTGACC CTTCATCCGTGCAAATCATCTGTTTCAAAGTCAAGGCTCAACATTACTTCGTACAAGTGAGTTATCACCACTTTGAAAAT GTCGAAGGATGTGATCATTGTCAAATGATTCAGAAAAAGGGAGAATAA
Upstream 100 bases:
>100_bases TTTGTCATGCTTTGGGAAAAAGTGATCTGTTATGGGGAATTGGCAAATCTTTTCCCATTCAGGGAGAAGATTTTGTCTAT TTGATTTGGTCTAAAAAACA
Downstream 100 bases:
>100_bases AAAGAGACAGAGGAATGGGTCGAAGAGAATCCCTCCCTTTGGCAACTTTCTAAAAGTCCAGAGTGTACCATTATTGAACA TGTCTGTGTAGATGCCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MLSRFNKSSGHEAHRRFMVKQQWIFLLFYTFPCVASMQTAKQAGQSWGKDQASLACDSGKKIRSDDFLTTDEKKQAFDAK AAEKKMKQRDIPSSETIDFLTSQEVQNNQNHRSFHEEENFFQISEKIFANQTPELPAEKDKEEEQKIYTCKQAGDPFIIN TERTLKVSIHPFPAQEAKICLGHKKIAIVKKIGDFPTSIKKLEQSYRNDPAIDPSSVQIICFKVKAQHYFVQVSYHHFEN VEGCDHCQMIQKKGE
Sequences:
>Translated_255_residues MLSRFNKSSGHEAHRRFMVKQQWIFLLFYTFPCVASMQTAKQAGQSWGKDQASLACDSGKKIRSDDFLTTDEKKQAFDAK AAEKKMKQRDIPSSETIDFLTSQEVQNNQNHRSFHEEENFFQISEKIFANQTPELPAEKDKEEEQKIYTCKQAGDPFIIN TERTLKVSIHPFPAQEAKICLGHKKIAIVKKIGDFPTSIKKLEQSYRNDPAIDPSSVQIICFKVKAQHYFVQVSYHHFEN VEGCDHCQMIQKKGE >Mature_255_residues MLSRFNKSSGHEAHRRFMVKQQWIFLLFYTFPCVASMQTAKQAGQSWGKDQASLACDSGKKIRSDDFLTTDEKKQAFDAK AAEKKMKQRDIPSSETIDFLTSQEVQNNQNHRSFHEEENFFQISEKIFANQTPELPAEKDKEEEQKIYTCKQAGDPFIIN TERTLKVSIHPFPAQEAKICLGHKKIAIVKKIGDFPTSIKKLEQSYRNDPAIDPSSVQIICFKVKAQHYFVQVSYHHFEN VEGCDHCQMIQKKGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29415; Mature: 29415
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRFNKSSGHEAHRRFMVKQQWIFLLFYTFPCVASMQTAKQAGQSWGKDQASLACDSGK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCC KIRSDDFLTTDEKKQAFDAKAAEKKMKQRDIPSSETIDFLTSQEVQNNQNHRSFHEEENF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH FQISEKIFANQTPELPAEKDKEEEQKIYTCKQAGDPFIINTERTLKVSIHPFPAQEAKIC HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCHHHEE LGHKKIAIVKKIGDFPTSIKKLEQSYRNDPAIDPSSVQIICFKVKAQHYFVQVSYHHFEN CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCEEEEEEEEHHCCC VEGCDHCQMIQKKGE CCCCHHHHHHHHCCC >Mature Secondary Structure MLSRFNKSSGHEAHRRFMVKQQWIFLLFYTFPCVASMQTAKQAGQSWGKDQASLACDSGK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCC KIRSDDFLTTDEKKQAFDAKAAEKKMKQRDIPSSETIDFLTSQEVQNNQNHRSFHEEENF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH FQISEKIFANQTPELPAEKDKEEEQKIYTCKQAGDPFIINTERTLKVSIHPFPAQEAKIC HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCHHHEE LGHKKIAIVKKIGDFPTSIKKLEQSYRNDPAIDPSSVQIICFKVKAQHYFVQVSYHHFEN CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCEEEEEEEEHHCCC VEGCDHCQMIQKKGE CCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA