Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is yhcG [H]
Identifier: 46447044
GI number: 46447044
Start: 1685329
End: 1686447
Strand: Reverse
Name: yhcG [H]
Synonym: pc1410
Alternate gene names: 46447044
Gene position: 1686447-1685329 (Counterclockwise)
Preceding gene: 46447047
Following gene: 46447043
Centisome position: 69.85
GC content: 37.71
Gene sequence:
>1119_bases ATGCCAAAGGAAAATAAGACCAAAAACTCTGTAGCTAAGATTGAAAAGGCCACTCTGTTTTCAAATAAAGAATACGCTTC AACTTTGGCAGAACTTAAGAAAACAATTCAACAATGCCAGATAAGAGCAATTACAGCCGCCAACAAAGAGTTAGTTCGTC TTTACTGGATGGTCGGCAAAACAATTGTTGAGAAACAGGAAAGCTGTGGATGGGGTAGCAAGTTCATTGATAAATTGACC AAAGACCTGCAACACGAATTTCCTGGAATAGAAGGTTTTTCCCGCACAAATATCTTTAGGATGAAAGCTTTTTATCGTGA ATATAAATTAGTCCCACCGCTAGTGGGACAATTTAATGAACTAGAACATTTAGGGGTTTTAGCACAAATTCCCTGGAGTC ATAACATTGTTTTAATGGAAAAGCTTGATAATATTGAAGAGCGTATTTGGTATGCAAATAAAACCCTAGAGCATGGCTGG AGTCGCGATATTCTCTCTATGTGGATAGACTCAAAACTGCACAAGAGAGAAGGTAAAGCGATAACAAACTTCAAAACTAC CTTACCAGCTCCGCAATCAGATTTAGCCCAGCAAGCGTTAAAAGATCCGTTCTTGTTTGATTTCTTAACACTCCATAAAG ATCATCAAGAAAAAGACCTGGAAGATGGTTTGGTTAACCATATTCAAAAGTTTTTATTAGAGCTTGGACAAGGGTTTGCT TTCATGGGTAGGCAATACCAAATCAATGTAGAAGGCGACCCATACTACATTGACCTACTTTTTTATCATGTGAAACTTAG AGCTTTCGTCGTTATTGAACTTAAAGCACGTGCGTTTAAGCCTGAGGATGCAGGACAGCTCAATTTCTATTTGTCTGCTG TAGATGACATGTTAAAGCACCCTAGCGATAATCCAACAATCGGCATTTTATTATGCAAAACAAAAAAGAAGGTCAAAGCC GAATATGCTTTTAGGGACATTAAAAAGCCAATGGCAGCAATTGAATACGAAACTATGTTGACCAAAGCACTACCCGAAGA GCTTAAATCAAGTCTACCTTCAATTAAAGAAATCGAAGAAGAGTTAGAGAAAGACACAAAGAATGACACCAAATACTAA
Upstream 100 bases:
>100_bases AAAGACAACAGGAAAGCTATAAAGATCAATAATTAGCTTGAATCTATACTATGCCGCTTGTTAAGATCGATAACTTAATG CCCCAATTTTTGAGGATGAA
Downstream 100 bases:
>100_bases GTAAAAATCGCTACAAGCCCATTAAATAAATTTAAATGTTTCCCGCCAAAACTATATAGATAAGACAATTGAAAAATTAA AAAATAAACTTGAGGGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MPKENKTKNSVAKIEKATLFSNKEYASTLAELKKTIQQCQIRAITAANKELVRLYWMVGKTIVEKQESCGWGSKFIDKLT KDLQHEFPGIEGFSRTNIFRMKAFYREYKLVPPLVGQFNELEHLGVLAQIPWSHNIVLMEKLDNIEERIWYANKTLEHGW SRDILSMWIDSKLHKREGKAITNFKTTLPAPQSDLAQQALKDPFLFDFLTLHKDHQEKDLEDGLVNHIQKFLLELGQGFA FMGRQYQINVEGDPYYIDLLFYHVKLRAFVVIELKARAFKPEDAGQLNFYLSAVDDMLKHPSDNPTIGILLCKTKKKVKA EYAFRDIKKPMAAIEYETMLTKALPEELKSSLPSIKEIEEELEKDTKNDTKY
Sequences:
>Translated_372_residues MPKENKTKNSVAKIEKATLFSNKEYASTLAELKKTIQQCQIRAITAANKELVRLYWMVGKTIVEKQESCGWGSKFIDKLT KDLQHEFPGIEGFSRTNIFRMKAFYREYKLVPPLVGQFNELEHLGVLAQIPWSHNIVLMEKLDNIEERIWYANKTLEHGW SRDILSMWIDSKLHKREGKAITNFKTTLPAPQSDLAQQALKDPFLFDFLTLHKDHQEKDLEDGLVNHIQKFLLELGQGFA FMGRQYQINVEGDPYYIDLLFYHVKLRAFVVIELKARAFKPEDAGQLNFYLSAVDDMLKHPSDNPTIGILLCKTKKKVKA EYAFRDIKKPMAAIEYETMLTKALPEELKSSLPSIKEIEEELEKDTKNDTKY >Mature_371_residues PKENKTKNSVAKIEKATLFSNKEYASTLAELKKTIQQCQIRAITAANKELVRLYWMVGKTIVEKQESCGWGSKFIDKLTK DLQHEFPGIEGFSRTNIFRMKAFYREYKLVPPLVGQFNELEHLGVLAQIPWSHNIVLMEKLDNIEERIWYANKTLEHGWS RDILSMWIDSKLHKREGKAITNFKTTLPAPQSDLAQQALKDPFLFDFLTLHKDHQEKDLEDGLVNHIQKFLLELGQGFAF MGRQYQINVEGDPYYIDLLFYHVKLRAFVVIELKARAFKPEDAGQLNFYLSAVDDMLKHPSDNPTIGILLCKTKKKVKAE YAFRDIKKPMAAIEYETMLTKALPEELKSSLPSIKEIEEELEKDTKNDTKY
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=352, Percent_Identity=30.1136363636364, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 43154; Mature: 43023
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKENKTKNSVAKIEKATLFSNKEYASTLAELKKTIQQCQIRAITAANKELVRLYWMVGK CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TIVEKQESCGWGSKFIDKLTKDLQHEFPGIEGFSRTNIFRMKAFYREYKLVPPLVGQFNE HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCHHH LEHLGVLAQIPWSHNIVLMEKLDNIEERIWYANKTLEHGWSRDILSMWIDSKLHKREGKA HHHHCHHEECCCCCCEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCE ITNFKTTLPAPQSDLAQQALKDPFLFDFLTLHKDHQEKDLEDGLVNHIQKFLLELGQGFA ECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH FMGRQYQINVEGDPYYIDLLFYHVKLRAFVVIELKARAFKPEDAGQLNFYLSAVDDMLKH HCCCEEEEEECCCCEEHHHHHHHHHHHHEEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHC PSDNPTIGILLCKTKKKVKAEYAFRDIKKPMAAIEYETMLTKALPEELKSSLPSIKEIEE CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ELEKDTKNDTKY HHHHCCCCCCCC >Mature Secondary Structure PKENKTKNSVAKIEKATLFSNKEYASTLAELKKTIQQCQIRAITAANKELVRLYWMVGK CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TIVEKQESCGWGSKFIDKLTKDLQHEFPGIEGFSRTNIFRMKAFYREYKLVPPLVGQFNE HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCHHH LEHLGVLAQIPWSHNIVLMEKLDNIEERIWYANKTLEHGWSRDILSMWIDSKLHKREGKA HHHHCHHEECCCCCCEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCE ITNFKTTLPAPQSDLAQQALKDPFLFDFLTLHKDHQEKDLEDGLVNHIQKFLLELGQGFA ECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH FMGRQYQINVEGDPYYIDLLFYHVKLRAFVVIELKARAFKPEDAGQLNFYLSAVDDMLKH HCCCEEEEEECCCCEEHHHHHHHHHHHHEEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHC PSDNPTIGILLCKTKKKVKAEYAFRDIKKPMAAIEYETMLTKALPEELKSSLPSIKEIEE CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ELEKDTKNDTKY HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]