Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446985
Identifier: 46446985
GI number: 46446985
Start: 1615208
End: 1615456
Strand: Reverse
Name: 46446985
Synonym: pc1351
Alternate gene names: NA
Gene position: 1615456-1615208 (Counterclockwise)
Preceding gene: 46446986
Following gene: 46446984
Centisome position: 66.91
GC content: 35.34
Gene sequence:
>249_bases GTGTTGGCTAGGCAATTAGATCCTCGAGACAAAAAAACCGCTGAGCTTCTTTTTGCAAAACGACCTGAATCCTTAAAAAA AGCCCTCTATTTCACGGATAAATTTAATGCCTATTATGAAACCATTCTTTGGAGCAAACATCAAGCAGTTAGCAAGCTAT CTGGCCAGACAAGCTACATTGAAAAATTTAATTTTACTCTTAAGACAAAGGTATGCAAGTTTTGTAAGGAAAACACTTTC ATTTTCTAA
Upstream 100 bases:
>100_bases TAGAAGTGGCTAAACTTGAAGGAGATGAGCGATGGAGTTGGGCAGGAAATAAGAAAAATGATCTGTGGCTATGGCTCGTT TTCCATAAAAAAATTGCCAA
Downstream 100 bases:
>100_bases AAAGCTAACTAATCCCATTTAGTTAATAAAATATTTTATTTGTGATCACAATAGACAATTGAGAGCCTTACCTATTTAGC ACTACCAAAAATTATCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MLARQLDPRDKKTAELLFAKRPESLKKALYFTDKFNAYYETILWSKHQAVSKLSGQTSYIEKFNFTLKTKVCKFCKENTF IF
Sequences:
>Translated_82_residues MLARQLDPRDKKTAELLFAKRPESLKKALYFTDKFNAYYETILWSKHQAVSKLSGQTSYIEKFNFTLKTKVCKFCKENTF IF >Mature_82_residues MLARQLDPRDKKTAELLFAKRPESLKKALYFTDKFNAYYETILWSKHQAVSKLSGQTSYIEKFNFTLKTKVCKFCKENTF IF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9738; Mature: 9738
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARQLDPRDKKTAELLFAKRPESLKKALYFTDKFNAYYETILWSKHQAVSKLSGQTSYI CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH EKFNFTLKTKVCKFCKENTFIF HHHCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLARQLDPRDKKTAELLFAKRPESLKKALYFTDKFNAYYETILWSKHQAVSKLSGQTSYI CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH EKFNFTLKTKVCKFCKENTFIF HHHCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA