Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is pssA [H]
Identifier: 46446904
GI number: 46446904
Start: 1516627
End: 1517490
Strand: Reverse
Name: pssA [H]
Synonym: pc1270
Alternate gene names: 46446904
Gene position: 1517490-1516627 (Counterclockwise)
Preceding gene: 46446907
Following gene: 46446901
Centisome position: 62.85
GC content: 38.89
Gene sequence:
>864_bases ATGCATTCTCTTCAACGGAAGAAAATTTATTTTTTACCTAATGTCATTACCGCTTTTGGTCTTTCTTGTGGACTTTTTGT CATCTTTAAAATGAATATGACGGGGGTAGGAGAAGTGACCCCACAAATTTTAACCGCTGTGACAGCTATATTGCTTTTAG CTGCGTTTGCCGATTTGATGGATGGAGCAGTCGCTCGCGTTATCAAAGCGGAAAGTGATTTTGGGGTAGTATTTGACACA TTGGCTGATGCCATTTCTTTTGGGGTGGCCCCTTCTGTAATTATTTTAAAAAGCCTTTCTGTTGATCCCAGTACAAAATT ATCTTTTTTAGTTACCATGTCTGCAATTGTCTTTTCACTTTGTGGAGTTCTTCGTCTAGTTAGGTTTAATGTAGCAGCAT TAGCTACAAAAAATAATGTTGAATTGGCTGTTGCGCATAAGAAGCATTTTACAGGACTTCCAATTCCTGCGGCAGCGGCA GCGGCAGTTTCTCTTAATTTTTTCTTGTTTAATCCCAATTTTGAGTGGGTAAAACAATTTCCTACCCACAGCCAAACCTG GATTTTATCTGTGATGTTGATGCTATTAGGATATTGCATGGTAAGTCGCTGGAAATTCCCTAGTGTCAAAAGTTTAGAAA TAAAAGTTTCTTCTTTTCGTCTTGTTTTTTTCACAGTACTTGCAGCTGTTTTGGTCTTCTATGGTATTCTTCATCATTTT GCCTTAGCATGTACGGTTCTTTCCTGGGGATATATTTTATTGGCTTTGACCTTAGCAATGTTTCGTGTTGTAGCAGGAAG ACGGTCCAAAACTTTAGAGGAATTTGAGCCGGAACCAGAGGAATTGGATGAGGTTGAAGAGTGA
Upstream 100 bases:
>100_bases ATTGTTGATTAAAGAATTCTTCAAGGTTTGGTTTAAAATAAGATTGTCAGGTATGTTATTTACAAATTCTCTCATTTAAC TTTTGGAGTGATTAACCGAT
Downstream 100 bases:
>100_bases ATTGGGATTTTTCCTGGTTTATTTTTTCACAAAATGGTTTGTTTAGAAAGTTATCAAAAACATTATTCGACAATAAATAT TGCACAATGCTTGCAAATAA
Product: putative cdpdiacylglycerol-serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MHSLQRKKIYFLPNVITAFGLSCGLFVIFKMNMTGVGEVTPQILTAVTAILLLAAFADLMDGAVARVIKAESDFGVVFDT LADAISFGVAPSVIILKSLSVDPSTKLSFLVTMSAIVFSLCGVLRLVRFNVAALATKNNVELAVAHKKHFTGLPIPAAAA AAVSLNFFLFNPNFEWVKQFPTHSQTWILSVMLMLLGYCMVSRWKFPSVKSLEIKVSSFRLVFFTVLAAVLVFYGILHHF ALACTVLSWGYILLALTLAMFRVVAGRRSKTLEEFEPEPEELDEVEE
Sequences:
>Translated_287_residues MHSLQRKKIYFLPNVITAFGLSCGLFVIFKMNMTGVGEVTPQILTAVTAILLLAAFADLMDGAVARVIKAESDFGVVFDT LADAISFGVAPSVIILKSLSVDPSTKLSFLVTMSAIVFSLCGVLRLVRFNVAALATKNNVELAVAHKKHFTGLPIPAAAA AAVSLNFFLFNPNFEWVKQFPTHSQTWILSVMLMLLGYCMVSRWKFPSVKSLEIKVSSFRLVFFTVLAAVLVFYGILHHF ALACTVLSWGYILLALTLAMFRVVAGRRSKTLEEFEPEPEELDEVEE >Mature_287_residues MHSLQRKKIYFLPNVITAFGLSCGLFVIFKMNMTGVGEVTPQILTAVTAILLLAAFADLMDGAVARVIKAESDFGVVFDT LADAISFGVAPSVIILKSLSVDPSTKLSFLVTMSAIVFSLCGVLRLVRFNVAALATKNNVELAVAHKKHFTGLPIPAAAA AAVSLNFFLFNPNFEWVKQFPTHSQTWILSVMLMLLGYCMVSRWKFPSVKSLEIKVSSFRLVFFTVLAAVLVFYGILHHF ALACTVLSWGYILLALTLAMFRVVAGRRSKTLEEFEPEPEELDEVEE
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=130, Percent_Identity=31.5384615384615, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 31592; Mature: 31592
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSLQRKKIYFLPNVITAFGLSCGLFVIFKMNMTGVGEVTPQILTAVTAILLLAAFADLM CCCCCCCEEEECHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH DGAVARVIKAESDFGVVFDTLADAISFGVAPSVIILKSLSVDPSTKLSFLVTMSAIVFSL HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH CGVLRLVRFNVAALATKNNVELAVAHKKHFTGLPIPAAAAAAVSLNFFLFNPNFEWVKQF HHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCHHHHHHHEEEEEEECCCHHHHHHC PTHSQTWILSVMLMLLGYCMVSRWKFPSVKSLEIKVSSFRLVFFTVLAAVLVFYGILHHF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ALACTVLSWGYILLALTLAMFRVVAGRRSKTLEEFEPEPEELDEVEE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCC >Mature Secondary Structure MHSLQRKKIYFLPNVITAFGLSCGLFVIFKMNMTGVGEVTPQILTAVTAILLLAAFADLM CCCCCCCEEEECHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH DGAVARVIKAESDFGVVFDTLADAISFGVAPSVIILKSLSVDPSTKLSFLVTMSAIVFSL HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH CGVLRLVRFNVAALATKNNVELAVAHKKHFTGLPIPAAAAAAVSLNFFLFNPNFEWVKQF HHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCHHHHHHHEEEEEEECCCHHHHHHC PTHSQTWILSVMLMLLGYCMVSRWKFPSVKSLEIKVSSFRLVFFTVLAAVLVFYGILHHF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ALACTVLSWGYILLALTLAMFRVVAGRRSKTLEEFEPEPEELDEVEE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]