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The map label for this gene is ydfG [C]

Identifier: 46446900

GI number: 46446900

Start: 1511948

End: 1512781

Strand: Reverse

Name: ydfG [C]

Synonym: pc1266

Alternate gene names: 46446900

Gene position: 1512781-1511948 (Counterclockwise)

Preceding gene: 46446901

Following gene: 46446899

Centisome position: 62.65

GC content: 38.61

Gene sequence:

>834_bases
GTGTCGAGAAGCGGGAGCTTGATGATGAAACAACGTTTGGTCCTTATTACGGGCGCAACAGCTGGAATTGGGCAAGCTCT
TGTTCATCTAGCGGCTCAAAAAGAACTAAAATTACTCATTACGGGTAGAAATCAAGAAGAATTAAAAAAACTGACGGACA
CATTTGGTTCTTTGATTGTTCAAGCAGTGGCAGCCGACCTTTCTCAGGAAGAAGGTGTCAAAACAATCATTGACTTAATT
CATAAGCATTGTCCCGATATTATTATTAATAATGCGGGTTTTGGTTTATATGGAGAAGCTCTTTCGTATTCTACTGTACA
GCAAAAGCATATTGTTGATGTAAATGTCAATGCAGTTTTGCAACTTAGTTTGGAAGGAGCAAGAGCTTTAATTTCTCAGG
TTAAGCAAGGCGTTATTTTAAATGTATCCTCGGCTATTTCTTTTCAGGTAGCGCCTAATATGGCTGTTTATGCTGCCACT
AAGGCATTTATCAACCAGTTTTCACAAAGTTTAGATGAAGAATTAAAACCGCTTGGAATTCGCGTGTTGGTGGCGTGTCC
AGGAATGGTTAAAACAGAATTTAGCCAAAATGCTGGAATGACGCGTACAAGAAAATTTACTGCGGTCATGTCTTCCAAAT
TTGTAGCTCGTGCAATCTGGAAACAAATTGAAAGCTTAACTCCTTTAACAATTATTGATTGGAAATACCGGTTATTAACC
TGGCTTTCTTATTTGATTCCGAAAAAAATCGTTACCGCTATCATTAAAAACAACATTGCGAAGCGTATTGCTCCGCGCAA
CGTCATTAGATTACCCTCATGCAAGAACAAATAG

Upstream 100 bases:

>100_bases
TTGAAGAACTCTATACAGTGAAAAAAGCTTTAGTGAAAACTTTATTAGCAGCAGGTCATTCACGCATTAAATACCCTGCG
CCAGAAAAAAAACTTTTAGC

Downstream 100 bases:

>100_bases
ATGTAGAATTGCTTCCTCAAGAGCCCAATGGATTTATAACTTTTAATTTAGATCCTTTAATTTTAAAAGCACTAGATAAA
ATGAATTTTAAAGAGCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MSRSGSLMMKQRLVLITGATAGIGQALVHLAAQKELKLLITGRNQEELKKLTDTFGSLIVQAVAADLSQEEGVKTIIDLI
HKHCPDIIINNAGFGLYGEALSYSTVQQKHIVDVNVNAVLQLSLEGARALISQVKQGVILNVSSAISFQVAPNMAVYAAT
KAFINQFSQSLDEELKPLGIRVLVACPGMVKTEFSQNAGMTRTRKFTAVMSSKFVARAIWKQIESLTPLTIIDWKYRLLT
WLSYLIPKKIVTAIIKNNIAKRIAPRNVIRLPSCKNK

Sequences:

>Translated_277_residues
MSRSGSLMMKQRLVLITGATAGIGQALVHLAAQKELKLLITGRNQEELKKLTDTFGSLIVQAVAADLSQEEGVKTIIDLI
HKHCPDIIINNAGFGLYGEALSYSTVQQKHIVDVNVNAVLQLSLEGARALISQVKQGVILNVSSAISFQVAPNMAVYAAT
KAFINQFSQSLDEELKPLGIRVLVACPGMVKTEFSQNAGMTRTRKFTAVMSSKFVARAIWKQIESLTPLTIIDWKYRLLT
WLSYLIPKKIVTAIIKNNIAKRIAPRNVIRLPSCKNK
>Mature_276_residues
SRSGSLMMKQRLVLITGATAGIGQALVHLAAQKELKLLITGRNQEELKKLTDTFGSLIVQAVAADLSQEEGVKTIIDLIH
KHCPDIIINNAGFGLYGEALSYSTVQQKHIVDVNVNAVLQLSLEGARALISQVKQGVILNVSSAISFQVAPNMAVYAATK
AFINQFSQSLDEELKPLGIRVLVACPGMVKTEFSQNAGMTRTRKFTAVMSSKFVARAIWKQIESLTPLTIIDWKYRLLTW
LSYLIPKKIVTAIIKNNIAKRIAPRNVIRLPSCKNK

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=209, Percent_Identity=33.4928229665072, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7705925, Length=190, Percent_Identity=30, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI226371731, Length=201, Percent_Identity=27.363184079602, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI40254992, Length=192, Percent_Identity=27.6041666666667, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI7705855, Length=189, Percent_Identity=25.3968253968254, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787820, Length=221, Percent_Identity=30.316742081448, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1786701, Length=268, Percent_Identity=26.1194029850746, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787335, Length=189, Percent_Identity=25.3968253968254, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082160, Length=198, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI2367365, Length=196, Percent_Identity=27.5510204081633, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87082100, Length=191, Percent_Identity=30.8900523560209, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789208, Length=197, Percent_Identity=25.3807106598985, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789378, Length=208, Percent_Identity=28.3653846153846, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=220, Percent_Identity=30.9090909090909, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17562904, Length=217, Percent_Identity=31.7972350230415, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI71994600, Length=197, Percent_Identity=30.4568527918782, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=27.0992366412214, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=214, Percent_Identity=32.7102803738318, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=26.0377358490566, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=201, Percent_Identity=30.8457711442786, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=200, Percent_Identity=33, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=200, Percent_Identity=32.5, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=268, Percent_Identity=26.4925373134328, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=267, Percent_Identity=27.3408239700375, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=193, Percent_Identity=32.1243523316062, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=206, Percent_Identity=29.6116504854369, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=198, Percent_Identity=29.2929292929293, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17551412, Length=222, Percent_Identity=26.5765765765766, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17562990, Length=214, Percent_Identity=28.9719626168224, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=203, Percent_Identity=31.5270935960591, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6322067, Length=197, Percent_Identity=25.8883248730964, Blast_Score=72, Evalue=8e-14,
Organism=Drosophila melanogaster, GI28571526, Length=198, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24584752, Length=193, Percent_Identity=30.5699481865285, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI21357041, Length=199, Percent_Identity=31.1557788944724, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24640442, Length=196, Percent_Identity=31.6326530612245, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24639444, Length=189, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI161076933, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584748, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24644339, Length=195, Percent_Identity=29.7435897435897, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24584744, Length=194, Percent_Identity=28.8659793814433, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574402, Length=194, Percent_Identity=28.8659793814433, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24580925, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24643142, Length=187, Percent_Identity=31.5508021390374, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI23397609, Length=196, Percent_Identity=25, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281364494, Length=197, Percent_Identity=27.4111675126904, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21358495, Length=255, Percent_Identity=25.8823529411765, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 30455; Mature: 30324

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSGSLMMKQRLVLITGATAGIGQALVHLAAQKELKLLITGRNQEELKKLTDTFGSLIV
CCCCCCHHHHCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH
QAVAADLSQEEGVKTIIDLIHKHCPDIIINNAGFGLYGEALSYSTVQQKHIVDVNVNAVL
HHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHEEEEECCCEEE
QLSLEGARALISQVKQGVILNVSSAISFQVAPNMAVYAATKAFINQFSQSLDEELKPLGI
EEEHHHHHHHHHHHHCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
RVLVACPGMVKTEFSQNAGMTRTRKFTAVMSSKFVARAIWKQIESLTPLTIIDWKYRLLT
EEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHH
WLSYLIPKKIVTAIIKNNIAKRIAPRNVIRLPSCKNK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
>Mature Secondary Structure 
SRSGSLMMKQRLVLITGATAGIGQALVHLAAQKELKLLITGRNQEELKKLTDTFGSLIV
CCCCCHHHHCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH
QAVAADLSQEEGVKTIIDLIHKHCPDIIINNAGFGLYGEALSYSTVQQKHIVDVNVNAVL
HHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHEEEEECCCEEE
QLSLEGARALISQVKQGVILNVSSAISFQVAPNMAVYAATKAFINQFSQSLDEELKPLGI
EEEHHHHHHHHHHHHCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
RVLVACPGMVKTEFSQNAGMTRTRKFTAVMSSKFVARAIWKQIESLTPLTIIDWKYRLLT
EEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHH
WLSYLIPKKIVTAIIKNNIAKRIAPRNVIRLPSCKNK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12950922 [H]