Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
---|---|
Accession | NC_005861 |
Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is accC [H]
Identifier: 46446406
GI number: 46446406
Start: 952814
End: 954175
Strand: Direct
Name: accC [H]
Synonym: pc0772
Alternate gene names: 46446406
Gene position: 952814-954175 (Clockwise)
Preceding gene: 46446405
Following gene: 46446407
Centisome position: 39.46
GC content: 37.89
Gene sequence:
>1362_bases ATGCAAAAAGTTCTTATCGCTAACAGAGGCGAGATTGCCGTTCGAATTATTCGTGCTTGTCACGATTTAGGTCTTCAAAC TGTGGCTGTTTATTCGCAAGCAGATGCTGAAGCCTTACACGTTCTTCATGCTGACGAAGCCATTTGTATTGGAGAAGCCC CTTCCCATAAATCTTATCTTAAAGTGCCAAATATCCTTTCTGCTTGTGAAATTACCGGAGCTGATGCGATCCATCCGGGT TACGGTTTTTTAAGCGAAAATGCAAATTTTGCCTCTATTTGTGAAAGCTGTGGCTTAAACTTTATTGGACCGGCTCCCCA ATCTATTGCATTGCTTGGTGATAAAGCTAAAGCTAAAGCAACAGCAAAAAAAGCTGGTTGTCCTGTTATCCCAGGCTCAG ATGGAGTCGTAGTGGATATTAAAGAAGCTTTGAAAGACGCAAAAAAATTAGGTTTCCCTATTTTCATTAAAGCTGTTGCG GGAGGTGGCGGGAAAGGAATTCGGATAGCTTACAACGAAGAAGAGTTTACTAAGCTATTTGCAGCTGCACGAGCTGAAGC AGAGGTAAGTTTTGGGAATCCAGACGTCTATTTAGAAAAAATGATTATGAATCCTCGACATATTGAAGTGCAAGTGTTAG GGGATAAATTTGGTCATTATATTCATTTAGGAGAAAGAGATTGCACTACTCAACGACGCAGACAAAAACTCATTGAAGAG TCTCCAAGTCCGGTTCTCAGTCAAAAAATGCGCCAAAAGATTGGTCAAGCAGCTGTCAATGTTGTTAAAGAAGCAAATTA TTTTTCTGCGGGAACAGTAGAATTCCTTTTAGACAAAGATCAAAACTTTTATTTTATGGAAGTAAATACACGTATTCAAG TTGAGCATACGGTCACAGAAGAATTAACAGGTATTGATCTTGTAATGGAACAGCTCAAAATTGCTCGTGGAGAAAAATTG ATTTTAGAACAAAAGGATGTAAAATTCACTGGTCATGTAATTCAATTTAGAATTAATGCAGAAAATCCTAGCCACAATTT TGCTCCCTCTCCTGGAAAATTAGAATATTATCTTCCTCCTGGTGGCCCCCATGTTAGAGTTGACAGCGCTTGTTATTCAG GATATTCCATTCCTCCTAACTATGATTCAATGATTGCTAAATTAATTGTGAAGGGTAAAGATCGTACAGAAACTATTGCA ATAGGAAAAAGAGCTCTAAGTGAATTTCATATCGGAGGAGTTAATTCCACAATACCTTTTCACCTTTATATGCTAGAAGA TCCAAAATTTTTAAATGCAGATTTTGATCTGACTTATATCGATAACCTAATTGCAGAAGGTAATCGCTTTGAATTAGAAT AG
Upstream 100 bases:
>100_bases AGCAAATGTCTCAGGAGCAATAGCTGAAATCTTGGTTGAATCAGGACAGCCTGTAGAATTTGGTACGAAACTTTTCCGAA TCGTTGAGTAATTTTTATTT
Downstream 100 bases:
>100_bases ATATTGTCCAGTCTTTTGCTTAAAATTTATAAGAAAAGAATTCTAAAATATATATTCCTTGTAAATTTTGAGCAAAAATA TTGAATTTATTGGTTCACAA
Product: acetyl-CoA carboxylase biotin carboxylase subunit
Products: NA
Alternate protein names: Acetyl-CoA carboxylase subunit A; ACC [H]
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MQKVLIANRGEIAVRIIRACHDLGLQTVAVYSQADAEALHVLHADEAICIGEAPSHKSYLKVPNILSACEITGADAIHPG YGFLSENANFASICESCGLNFIGPAPQSIALLGDKAKAKATAKKAGCPVIPGSDGVVVDIKEALKDAKKLGFPIFIKAVA GGGGKGIRIAYNEEEFTKLFAAARAEAEVSFGNPDVYLEKMIMNPRHIEVQVLGDKFGHYIHLGERDCTTQRRRQKLIEE SPSPVLSQKMRQKIGQAAVNVVKEANYFSAGTVEFLLDKDQNFYFMEVNTRIQVEHTVTEELTGIDLVMEQLKIARGEKL ILEQKDVKFTGHVIQFRINAENPSHNFAPSPGKLEYYLPPGGPHVRVDSACYSGYSIPPNYDSMIAKLIVKGKDRTETIA IGKRALSEFHIGGVNSTIPFHLYMLEDPKFLNADFDLTYIDNLIAEGNRFELE
Sequences:
>Translated_453_residues MQKVLIANRGEIAVRIIRACHDLGLQTVAVYSQADAEALHVLHADEAICIGEAPSHKSYLKVPNILSACEITGADAIHPG YGFLSENANFASICESCGLNFIGPAPQSIALLGDKAKAKATAKKAGCPVIPGSDGVVVDIKEALKDAKKLGFPIFIKAVA GGGGKGIRIAYNEEEFTKLFAAARAEAEVSFGNPDVYLEKMIMNPRHIEVQVLGDKFGHYIHLGERDCTTQRRRQKLIEE SPSPVLSQKMRQKIGQAAVNVVKEANYFSAGTVEFLLDKDQNFYFMEVNTRIQVEHTVTEELTGIDLVMEQLKIARGEKL ILEQKDVKFTGHVIQFRINAENPSHNFAPSPGKLEYYLPPGGPHVRVDSACYSGYSIPPNYDSMIAKLIVKGKDRTETIA IGKRALSEFHIGGVNSTIPFHLYMLEDPKFLNADFDLTYIDNLIAEGNRFELE >Mature_453_residues MQKVLIANRGEIAVRIIRACHDLGLQTVAVYSQADAEALHVLHADEAICIGEAPSHKSYLKVPNILSACEITGADAIHPG YGFLSENANFASICESCGLNFIGPAPQSIALLGDKAKAKATAKKAGCPVIPGSDGVVVDIKEALKDAKKLGFPIFIKAVA GGGGKGIRIAYNEEEFTKLFAAARAEAEVSFGNPDVYLEKMIMNPRHIEVQVLGDKFGHYIHLGERDCTTQRRRQKLIEE SPSPVLSQKMRQKIGQAAVNVVKEANYFSAGTVEFLLDKDQNFYFMEVNTRIQVEHTVTEELTGIDLVMEQLKIARGEKL ILEQKDVKFTGHVIQFRINAENPSHNFAPSPGKLEYYLPPGGPHVRVDSACYSGYSIPPNYDSMIAKLIVKGKDRTETIA IGKRALSEFHIGGVNSTIPFHLYMLEDPKFLNADFDLTYIDNLIAEGNRFELE
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotin carboxylation domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=441, Percent_Identity=45.8049886621315, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI189095269, Length=447, Percent_Identity=46.7561521252796, Blast_Score=400, Evalue=1e-111, Organism=Homo sapiens, GI65506442, Length=447, Percent_Identity=46.7561521252796, Blast_Score=399, Evalue=1e-111, Organism=Homo sapiens, GI295821183, Length=447, Percent_Identity=46.7561521252796, Blast_Score=399, Evalue=1e-111, Organism=Homo sapiens, GI106049528, Length=447, Percent_Identity=43.6241610738255, Blast_Score=385, Evalue=1e-107, Organism=Homo sapiens, GI106049295, Length=447, Percent_Identity=43.6241610738255, Blast_Score=385, Evalue=1e-107, Organism=Homo sapiens, GI106049292, Length=447, Percent_Identity=43.6241610738255, Blast_Score=385, Evalue=1e-107, Organism=Homo sapiens, GI38679960, Length=513, Percent_Identity=31.1890838206628, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI38679971, Length=513, Percent_Identity=31.1890838206628, Blast_Score=238, Evalue=7e-63, Organism=Homo sapiens, GI38679974, Length=513, Percent_Identity=31.1890838206628, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI38679977, Length=513, Percent_Identity=31.1890838206628, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI38679967, Length=513, Percent_Identity=31.1890838206628, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI134142062, Length=514, Percent_Identity=30.7392996108949, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI18105007, Length=238, Percent_Identity=24.3697478991597, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI1789654, Length=442, Percent_Identity=50, Blast_Score=427, Evalue=1e-121, Organism=Caenorhabditis elegans, GI17567343, Length=447, Percent_Identity=45.1901565995526, Blast_Score=387, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17562816, Length=444, Percent_Identity=44.3693693693694, Blast_Score=377, Evalue=1e-105, Organism=Caenorhabditis elegans, GI71987519, Length=451, Percent_Identity=44.7893569844789, Blast_Score=377, Evalue=1e-105, Organism=Caenorhabditis elegans, GI133931226, Length=499, Percent_Identity=29.4589178356713, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71997163, Length=509, Percent_Identity=29.0766208251473, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI71997168, Length=453, Percent_Identity=31.1258278145695, Blast_Score=195, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6319695, Length=447, Percent_Identity=42.7293064876958, Blast_Score=351, Evalue=1e-97, Organism=Saccharomyces cerevisiae, GI6319685, Length=450, Percent_Identity=42.4444444444444, Blast_Score=347, Evalue=2e-96, Organism=Saccharomyces cerevisiae, GI6321376, Length=447, Percent_Identity=43.1767337807606, Blast_Score=342, Evalue=7e-95, Organism=Saccharomyces cerevisiae, GI6323863, Length=464, Percent_Identity=32.5431034482759, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6324343, Length=519, Percent_Identity=31.5992292870906, Blast_Score=208, Evalue=2e-54, Organism=Drosophila melanogaster, GI24651757, Length=443, Percent_Identity=45.823927765237, Blast_Score=400, Evalue=1e-112, Organism=Drosophila melanogaster, GI24652212, Length=446, Percent_Identity=45.9641255605381, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24652210, Length=446, Percent_Identity=45.9641255605381, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24652214, Length=446, Percent_Identity=45.9641255605381, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI19921944, Length=446, Percent_Identity=45.9641255605381, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24652216, Length=446, Percent_Identity=45.9641255605381, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI281363050, Length=446, Percent_Identity=45.9641255605381, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24652224, Length=446, Percent_Identity=45.9641255605381, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24652222, Length=446, Percent_Identity=45.9641255605381, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24652220, Length=446, Percent_Identity=45.9641255605381, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24652218, Length=446, Percent_Identity=45.9641255605381, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24651759, Length=405, Percent_Identity=45.1851851851852, Blast_Score=358, Evalue=4e-99, Organism=Drosophila melanogaster, GI161076409, Length=508, Percent_Identity=31.2992125984252, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI161076407, Length=508, Percent_Identity=31.2992125984252, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24586460, Length=508, Percent_Identity=31.2992125984252, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24586458, Length=508, Percent_Identity=31.2992125984252, Blast_Score=229, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004549 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14; =6.4.1.2 [H]
Molecular weight: Translated: 49790; Mature: 49790
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2 ; PS50979 BC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKVLIANRGEIAVRIIRACHDLGLQTVAVYSQADAEALHVLHADEAICIGEAPSHKSYL CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCCC KVPNILSACEITGADAIHPGYGFLSENANFASICESCGLNFIGPAPQSIALLGDKAKAKA CCCCHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCCCCEEEEECCCHHHHH TAKKAGCPVIPGSDGVVVDIKEALKDAKKLGFPIFIKAVAGGGGKGIRIAYNEEEFTKLF HHHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECHHHHHHHH AAARAEAEVSFGNPDVYLEKMIMNPRHIEVQVLGDKFGHYIHLGERDCTTQRRRQKLIEE HHHHCCCEEECCCCCHHHHHHHCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHC SPSPVLSQKMRQKIGQAAVNVVKEANYFSAGTVEFLLDKDQNFYFMEVNTRIQVEHTVTE CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCEEEEEEEHHH ELTGIDLVMEQLKIARGEKLILEQKDVKFTGHVIQFRINAENPSHNFAPSPGKLEYYLPP HHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECC GGPHVRVDSACYSGYSIPPNYDSMIAKLIVKGKDRTETIAIGKRALSEFHIGGVNSTIPF CCCEEEECHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCE HLYMLEDPKFLNADFDLTYIDNLIAEGNRFELE EEEEECCCCEECCCCCHHHHHHHHCCCCEEECC >Mature Secondary Structure MQKVLIANRGEIAVRIIRACHDLGLQTVAVYSQADAEALHVLHADEAICIGEAPSHKSYL CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCCC KVPNILSACEITGADAIHPGYGFLSENANFASICESCGLNFIGPAPQSIALLGDKAKAKA CCCCHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCCCCEEEEECCCHHHHH TAKKAGCPVIPGSDGVVVDIKEALKDAKKLGFPIFIKAVAGGGGKGIRIAYNEEEFTKLF HHHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECHHHHHHHH AAARAEAEVSFGNPDVYLEKMIMNPRHIEVQVLGDKFGHYIHLGERDCTTQRRRQKLIEE HHHHCCCEEECCCCCHHHHHHHCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHC SPSPVLSQKMRQKIGQAAVNVVKEANYFSAGTVEFLLDKDQNFYFMEVNTRIQVEHTVTE CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCEEEEEEEHHH ELTGIDLVMEQLKIARGEKLILEQKDVKFTGHVIQFRINAENPSHNFAPSPGKLEYYLPP HHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECC GGPHVRVDSACYSGYSIPPNYDSMIAKLIVKGKDRTETIAIGKRALSEFHIGGVNSTIPF CCCEEEECHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCE HLYMLEDPKFLNADFDLTYIDNLIAEGNRFELE EEEEECCCCEECCCCCHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8102363; 11759840 [H]