Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446371
Identifier: 46446371
GI number: 46446371
Start: 904066
End: 904944
Strand: Direct
Name: 46446371
Synonym: pc0737
Alternate gene names: NA
Gene position: 904066-904944 (Clockwise)
Preceding gene: 46446369
Following gene: 46446374
Centisome position: 37.44
GC content: 32.99
Gene sequence:
>879_bases ATGGATGTAACTGAACTATATTGTACAATTGATGATTTCTGGAAATCTTTCAAGCAAGAATGGGAAAAACACCTTATAGA TTCTGGAAAGCACAAAAAGGGCCCAGAATCTGTGTTATCTCCAGCTGAAATGATGACCATCATCGTTTTATTTCATCAAT CAAATTACAGAACTTTCAAACACTTCTATAACTACATTAATTTTTATTTAAGAAATGAATTTCCAAAATTAATAAGCTAT GATCGATTCGTTTATTTAAAGAAAAATATGTTTGTTCCTTTATTTGCTTACCTCATGCACAGAAAAGGTAAAGTGACGGG AATAGCTTTTATTGATTCTACATCAATAGCAGTATGTCATAATAAAAGAATTTCGCGAAATAAGGTATTTGCAGGGCTAG CAAAAAGAGGGAAGAACACTTCAGGATGGTTTTACGGTTTCAAATTACACATAATTAATAATGACAGCGGGGAAATTTTA GCTTTTCAACTTACACCAGGTAATGTATCTGATGTATCGATGGCTGAAACCCTTTCCAAGGGGCTGTTTGGAAAGTTATT TGGAGACAAAGGTTATATTTCTGGAAAATTAACAGAAAGTCTTCTAGAACAGGGCTTAGAGTTGTTTACGAGTGTACGAG CAAACATGAAACAAAAATTAATGACCTTTAATGATAAAATTTTATTACGAAAGAGATCTCTTATAGAGACAGTCAACGAT CAACTTAAAAATATTTCTCAAATTGAACATACTCGACATCGTAATATAGGCAATTTTTTGGTAAATATGCTAGGTGGGCT TGCTGCATATAGCCATCAACGGAAAAAGCCGTCTTTAAATTTTAGAGAAGAGAAATTCTGTGTAGCTATTGCTGCTTGA
Upstream 100 bases:
>100_bases TTAGGCTTAAACAAGATACATAAAATTTGAATGACAAAAGACCTCAACATGATTTAAAAGCATTGTTTACCACAACCATA CTTAATCATGAGAGGTCAAA
Downstream 100 bases:
>100_bases AACCCAAAGTTCAGGTTACTAAAATAGAATAATGAATTTTTTCATTTGATTATTGACATGATTTAAGAAATTTTTTGTCA GATATTAGTGAAGACTTACC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; IS4 Family Transposase; Transposase And Inactivated Derivative; Protease; Transposase For Insertion Sequence Element; Membrane-Associated Metal-Dependent Hydrolase; Transposase And Inactivated Derivatives IS5 Family; Transposase IS; LOW QUALITY PROTEIN ISPg3 Transposase
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MDVTELYCTIDDFWKSFKQEWEKHLIDSGKHKKGPESVLSPAEMMTIIVLFHQSNYRTFKHFYNYINFYLRNEFPKLISY DRFVYLKKNMFVPLFAYLMHRKGKVTGIAFIDSTSIAVCHNKRISRNKVFAGLAKRGKNTSGWFYGFKLHIINNDSGEIL AFQLTPGNVSDVSMAETLSKGLFGKLFGDKGYISGKLTESLLEQGLELFTSVRANMKQKLMTFNDKILLRKRSLIETVND QLKNISQIEHTRHRNIGNFLVNMLGGLAAYSHQRKKPSLNFREEKFCVAIAA
Sequences:
>Translated_292_residues MDVTELYCTIDDFWKSFKQEWEKHLIDSGKHKKGPESVLSPAEMMTIIVLFHQSNYRTFKHFYNYINFYLRNEFPKLISY DRFVYLKKNMFVPLFAYLMHRKGKVTGIAFIDSTSIAVCHNKRISRNKVFAGLAKRGKNTSGWFYGFKLHIINNDSGEIL AFQLTPGNVSDVSMAETLSKGLFGKLFGDKGYISGKLTESLLEQGLELFTSVRANMKQKLMTFNDKILLRKRSLIETVND QLKNISQIEHTRHRNIGNFLVNMLGGLAAYSHQRKKPSLNFREEKFCVAIAA >Mature_292_residues MDVTELYCTIDDFWKSFKQEWEKHLIDSGKHKKGPESVLSPAEMMTIIVLFHQSNYRTFKHFYNYINFYLRNEFPKLISY DRFVYLKKNMFVPLFAYLMHRKGKVTGIAFIDSTSIAVCHNKRISRNKVFAGLAKRGKNTSGWFYGFKLHIINNDSGEIL AFQLTPGNVSDVSMAETLSKGLFGKLFGDKGYISGKLTESLLEQGLELFTSVRANMKQKLMTFNDKILLRKRSLIETVND QLKNISQIEHTRHRNIGNFLVNMLGGLAAYSHQRKKPSLNFREEKFCVAIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33723; Mature: 33723
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVTELYCTIDDFWKSFKQEWEKHLIDSGKHKKGPESVLSPAEMMTIIVLFHQSNYRTFK CCHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHEEEEEEECCCCHHHH HFYNYINFYLRNEFPKLISYDRFVYLKKNMFVPLFAYLMHRKGKVTGIAFIDSTSIAVCH HHHHHHHHHHHHCCHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEE NKRISRNKVFAGLAKRGKNTSGWFYGFKLHIINNDSGEILAFQLTPGNVSDVSMAETLSK CCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHH GLFGKLFGDKGYISGKLTESLLEQGLELFTSVRANMKQKLMTFNDKILLRKRSLIETVND HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QLKNISQIEHTRHRNIGNFLVNMLGGLAAYSHQRKKPSLNFREEKFCVAIAA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MDVTELYCTIDDFWKSFKQEWEKHLIDSGKHKKGPESVLSPAEMMTIIVLFHQSNYRTFK CCHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHEEEEEEECCCCHHHH HFYNYINFYLRNEFPKLISYDRFVYLKKNMFVPLFAYLMHRKGKVTGIAFIDSTSIAVCH HHHHHHHHHHHHCCHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEE NKRISRNKVFAGLAKRGKNTSGWFYGFKLHIINNDSGEILAFQLTPGNVSDVSMAETLSK CCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHH GLFGKLFGDKGYISGKLTESLLEQGLELFTSVRANMKQKLMTFNDKILLRKRSLIETVND HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QLKNISQIEHTRHRNIGNFLVNMLGGLAAYSHQRKKPSLNFREEKFCVAIAA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA