Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446361
Identifier: 46446361
GI number: 46446361
Start: 881955
End: 883163
Strand: Direct
Name: 46446361
Synonym: pc0727
Alternate gene names: NA
Gene position: 881955-883163 (Clockwise)
Preceding gene: 46446360
Following gene: 46446364
Centisome position: 36.53
GC content: 33.91
Gene sequence:
>1209_bases ATGTTAACAGGAGATTATAATCATAGGCCAATTTCTATTCGTTCGCCTGAACTTTCTTCTAATTCAGCAAATCCTAACGC ATCTCAAGAATCACAGACCGCTGAAAAAGGTGTTGAACAGGTAGGAAAAGAAGAGAATAAAGAAAAAAAAATAGGAGAAG TGTCGCAGTTTGTTGACACGCATAAAATGCGGCAAAATATTATCAATTTTCAAACAACTTTAAGTGAAATTCTTGTCACT GATATGGAAAATGCTCCTTTATTAGCAAAAGAAATGGCTTTAAATCCCACACAATTTAACACTTTTATCAACACAGCAAT TGTTGATATTCCTCTTAGTGAGGCTGCTGCTAAATCTCCCATTAATTATAAAAAAATGCTCAATTCAATCGATTCATATA AGGAAAAATTGGGAGCGAAAAGCGATGAAACAAGGCCTGATTTAAAATTAAATGAAACGTTCTTGTTTTTTTCTATGAAT ATTATTCGCAATTTTGTTAGCAAAGCCCTAAGAAACAGCTGGGCTCCTTCTACTTTATGGAATTTGGTGGGAAAAAAAAT TGGCTTAAAGGACGAAGGAATGAACAAATACGAGTATATTTCACTGATGGTACAAGGATGTGCAAAAGTAAAAGATAATT TGGATGAAATTAAGCGCCGTTTAATCGAGGATGATAGTCCCCATCAATTTGTGCAAGAAATCAGCGGTTTATATATCCAT ACTGGACTTAACTCTGCTCAAACTTTGATAGAAAGCATAGAAGGGACTTTGAAAATCTTAGAAGAGCAGTTTGCTTATCA TGAATCACAAGGAACTCTAGAAGATTTTTTTAATGAAGCTTTTGACGACGGTAATATTTGTTTTGAAGCACGTGCTAGGC ATCTGCAAGAATATGCCATCACACAACTCACAGAAAAAGGGGTTGAAATTGCAGATATTAAGCTGATTTTAGATTATACA AAAGAAAGTACATTCGAAAAAATTTTTGAAGAAGAGATAAAGGTCTTTAGAGAAAAGAAAATCCGTGAAGGGAGTTTAAG CAGCGTAGATACCCCAAAAGCAGATGAATTTGAAGATTATTTGGTAGAAGAAAGAAAGATTTATGAAATCGAAGGAAAAG ATAGTATGGAAGAAATCCGTCCATTTAGACAAGCAGATGTAGAACGATTAATCGCTTACTTTAGAGACGAAATCATGATT TTAGAATAA
Upstream 100 bases:
>100_bases AATATTTAATATTTTATTAATTAATATTTTAAATATAATAAATAATTATTACTTAATATTAATTATAGTTGATTTTATAA TTAATTTATTAAGGGGGATT
Downstream 100 bases:
>100_bases AAAAAAGATTGTCTACAAACTTCTTCTTAATCGAGGCTTGTAGACAATAGGGAAATATTTAATTTTTTCCTCCAGCAAAC GATTTAAATCGAATTGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MLTGDYNHRPISIRSPELSSNSANPNASQESQTAEKGVEQVGKEENKEKKIGEVSQFVDTHKMRQNIINFQTTLSEILVT DMENAPLLAKEMALNPTQFNTFINTAIVDIPLSEAAAKSPINYKKMLNSIDSYKEKLGAKSDETRPDLKLNETFLFFSMN IIRNFVSKALRNSWAPSTLWNLVGKKIGLKDEGMNKYEYISLMVQGCAKVKDNLDEIKRRLIEDDSPHQFVQEISGLYIH TGLNSAQTLIESIEGTLKILEEQFAYHESQGTLEDFFNEAFDDGNICFEARARHLQEYAITQLTEKGVEIADIKLILDYT KESTFEKIFEEEIKVFREKKIREGSLSSVDTPKADEFEDYLVEERKIYEIEGKDSMEEIRPFRQADVERLIAYFRDEIMI LE
Sequences:
>Translated_402_residues MLTGDYNHRPISIRSPELSSNSANPNASQESQTAEKGVEQVGKEENKEKKIGEVSQFVDTHKMRQNIINFQTTLSEILVT DMENAPLLAKEMALNPTQFNTFINTAIVDIPLSEAAAKSPINYKKMLNSIDSYKEKLGAKSDETRPDLKLNETFLFFSMN IIRNFVSKALRNSWAPSTLWNLVGKKIGLKDEGMNKYEYISLMVQGCAKVKDNLDEIKRRLIEDDSPHQFVQEISGLYIH TGLNSAQTLIESIEGTLKILEEQFAYHESQGTLEDFFNEAFDDGNICFEARARHLQEYAITQLTEKGVEIADIKLILDYT KESTFEKIFEEEIKVFREKKIREGSLSSVDTPKADEFEDYLVEERKIYEIEGKDSMEEIRPFRQADVERLIAYFRDEIMI LE >Mature_402_residues MLTGDYNHRPISIRSPELSSNSANPNASQESQTAEKGVEQVGKEENKEKKIGEVSQFVDTHKMRQNIINFQTTLSEILVT DMENAPLLAKEMALNPTQFNTFINTAIVDIPLSEAAAKSPINYKKMLNSIDSYKEKLGAKSDETRPDLKLNETFLFFSMN IIRNFVSKALRNSWAPSTLWNLVGKKIGLKDEGMNKYEYISLMVQGCAKVKDNLDEIKRRLIEDDSPHQFVQEISGLYIH TGLNSAQTLIESIEGTLKILEEQFAYHESQGTLEDFFNEAFDDGNICFEARARHLQEYAITQLTEKGVEIADIKLILDYT KESTFEKIFEEEIKVFREKKIREGSLSSVDTPKADEFEDYLVEERKIYEIEGKDSMEEIRPFRQADVERLIAYFRDEIMI LE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46164; Mature: 46164
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGDYNHRPISIRSPELSSNSANPNASQESQTAEKGVEQVGKEENKEKKIGEVSQFVDT CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH HKMRQNIINFQTTLSEILVTDMENAPLLAKEMALNPTQFNTFINTAIVDIPLSEAAAKSP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHEECCCHHHHHCCC INYKKMLNSIDSYKEKLGAKSDETRPDLKLNETFLFFSMNIIRNFVSKALRNSWAPSTLW CCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHH NLVGKKIGLKDEGMNKYEYISLMVQGCAKVKDNLDEIKRRLIEDDSPHQFVQEISGLYIH HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEE TGLNSAQTLIESIEGTLKILEEQFAYHESQGTLEDFFNEAFDDGNICFEARARHLQEYAI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHH TQLTEKGVEIADIKLILDYTKESTFEKIFEEEIKVFREKKIREGSLSSVDTPKADEFEDY HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LVEERKIYEIEGKDSMEEIRPFRQADVERLIAYFRDEIMILE HHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEC >Mature Secondary Structure MLTGDYNHRPISIRSPELSSNSANPNASQESQTAEKGVEQVGKEENKEKKIGEVSQFVDT CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH HKMRQNIINFQTTLSEILVTDMENAPLLAKEMALNPTQFNTFINTAIVDIPLSEAAAKSP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHEECCCHHHHHCCC INYKKMLNSIDSYKEKLGAKSDETRPDLKLNETFLFFSMNIIRNFVSKALRNSWAPSTLW CCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHH NLVGKKIGLKDEGMNKYEYISLMVQGCAKVKDNLDEIKRRLIEDDSPHQFVQEISGLYIH HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEE TGLNSAQTLIESIEGTLKILEEQFAYHESQGTLEDFFNEAFDDGNICFEARARHLQEYAI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHH TQLTEKGVEIADIKLILDYTKESTFEKIFEEEIKVFREKKIREGSLSSVDTPKADEFEDY HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LVEERKIYEIEGKDSMEEIRPFRQADVERLIAYFRDEIMILE HHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA