Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446358
Identifier: 46446358
GI number: 46446358
Start: 879059
End: 879313
Strand: Direct
Name: 46446358
Synonym: pc0724
Alternate gene names: NA
Gene position: 879059-879313 (Clockwise)
Preceding gene: 46446355
Following gene: 46446359
Centisome position: 36.41
GC content: 37.65
Gene sequence:
>255_bases TTGTTCCAAAATTCGTTGAATTTAGGAGATAGGATGCCAGATTTATTTCCATTAGACTCTTACACTCCGTATCCCTTAAT ATTTTCTCCTCAAAATCATGCCAAATCAATGAAATTGCATTCATTTCCACGCGTCAAACGTAGCGCAGCACAAAAATGTG ACGGGGCAAAATGGTTACAAAAGGGGAGTCGATGTTCTTTTTTGCACAATGGGGAAATAGCGGAAATTTTAAATAGAAAA GGGACGCTTTGTTAA
Upstream 100 bases:
>100_bases AGGCTGAAAAATCATTTGTGCTAAGAATTTTAATTCTTCTAAAAGTTCTAAATCAATTACTCAAACCGTTGTTATTTTCA ATTGCGTCATTTTAATAAAT
Downstream 100 bases:
>100_bases AGAAAAAATTTATTATAAGATGAGTTTATCACGACAGGGGCATTTGATTACGCTAGGCGAAGCAATAAATTGTGCCAAAA CTTTCAATGTCGAGGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MFQNSLNLGDRMPDLFPLDSYTPYPLIFSPQNHAKSMKLHSFPRVKRSAAQKCDGAKWLQKGSRCSFLHNGEIAEILNRK GTLC
Sequences:
>Translated_84_residues MFQNSLNLGDRMPDLFPLDSYTPYPLIFSPQNHAKSMKLHSFPRVKRSAAQKCDGAKWLQKGSRCSFLHNGEIAEILNRK GTLC >Mature_84_residues MFQNSLNLGDRMPDLFPLDSYTPYPLIFSPQNHAKSMKLHSFPRVKRSAAQKCDGAKWLQKGSRCSFLHNGEIAEILNRK GTLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9553; Mature: 9553
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQNSLNLGDRMPDLFPLDSYTPYPLIFSPQNHAKSMKLHSFPRVKRSAAQKCDGAKWLQ CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHH KGSRCSFLHNGEIAEILNRKGTLC CCCCCCCCCCCCHHHHHHCCCCCC >Mature Secondary Structure MFQNSLNLGDRMPDLFPLDSYTPYPLIFSPQNHAKSMKLHSFPRVKRSAAQKCDGAKWLQ CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHH KGSRCSFLHNGEIAEILNRKGTLC CCCCCCCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA