Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446209
Identifier: 46446209
GI number: 46446209
Start: 708990
End: 710018
Strand: Direct
Name: 46446209
Synonym: pc0575
Alternate gene names: NA
Gene position: 708990-710018 (Clockwise)
Preceding gene: 46446208
Following gene: 46446210
Centisome position: 29.36
GC content: 38.39
Gene sequence:
>1029_bases ATGATGCGCTACATCAAGCCTTGGATCTTTTTGTTGAGTTTAAATTCGGCATTTCTTTTAGCAGAAAATTTTGATAAAAA AATGAATGATAGCAGCAAAAGTGCAACAATTTCTGAAACGATTGAAGCTTCGAAAGAACTTGATAATTATCGAGAGGCTC ATCCAGAAATTTACAATGAAAACTGCTGGTCATCAGTAGAACCAGAAACAGATGCTGAATATGCGAGATCTCATAATCTT TGGGGAATTTGGCTGCCTGAGGGCCCTCCAATGTTTCGCCCCTTTTTGGCGGATCCCCGCCAATTAACATATTCAGTAGG TTGGCGTTTTAATGACCGAGCAACGGTTAAAAACGTGATTGATGTATCATTTGGGGATACATTACCTATTTTTCGTTGGT GTGACATTTGGAAGTTTAGAGGAGACCTTCAATTAGAGTTAGAAGGGGGAGTCTGGGCAATTTTTGATCCTTTGCATAAA TCTGCTCCACTTATTGACGCTGACTATTATGTGGGTATTCCCATTACCTATGCTTTTGGTAATTGGGCTCTTCGGTTAAG AGGATATCACATTTCTACTCATATTGGTGATGAGTTTTTGATTAATCATCCTCACTTTGATCGGCGTAATCCAAGTATTG AAGCCATCGATTTGTCTGTTTCTTGGCAAAAAGAACAGATTCGATTATATGGAGTACTGGGTTGGGTTTGTTGCCAAGAT GATTCTTTTAGAGTAGGGCCTTTCTACCTTGAAACAGGATTAGAATTGAGACTTTCTCAGTTGGGTTATCGTGACCACTG CAATCGTTTGTATAGCGAACCTTTTTTTGGTATGCACTTCCGTTATCAATCTCATTTTAAAAAACATATCAACCAAACTT ATGTGCTAGGATGGGAATGGGGAAAAGTTTCAGGTATTCGACGTAAATTTAGACTTTTCTTAGAGTATCATGATGGATAT TCTTTGGATGGGCAGTTTTGTAAACGTGCCACTCATTATTTAAGTTTCAGAGGCTCATACGGATTTTAA
Upstream 100 bases:
>100_bases GCTATCCCTAGATTTTTTTGAATAAAAAACAATAGAGACTTAAAGGGGATTTTGTAAAATCTATTTTAAGGAATTCTTAA TAACATGCGTGAGAGTAACT
Downstream 100 bases:
>100_bases TCTATGAATCCAGAAGGTTATAACGGCCCTTTTGATAAAGATACCATTGAAACAAAATCTCCTTCGATTAATCCTTTATT AACTGAAGGAGATTTTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MMRYIKPWIFLLSLNSAFLLAENFDKKMNDSSKSATISETIEASKELDNYREAHPEIYNENCWSSVEPETDAEYARSHNL WGIWLPEGPPMFRPFLADPRQLTYSVGWRFNDRATVKNVIDVSFGDTLPIFRWCDIWKFRGDLQLELEGGVWAIFDPLHK SAPLIDADYYVGIPITYAFGNWALRLRGYHISTHIGDEFLINHPHFDRRNPSIEAIDLSVSWQKEQIRLYGVLGWVCCQD DSFRVGPFYLETGLELRLSQLGYRDHCNRLYSEPFFGMHFRYQSHFKKHINQTYVLGWEWGKVSGIRRKFRLFLEYHDGY SLDGQFCKRATHYLSFRGSYGF
Sequences:
>Translated_342_residues MMRYIKPWIFLLSLNSAFLLAENFDKKMNDSSKSATISETIEASKELDNYREAHPEIYNENCWSSVEPETDAEYARSHNL WGIWLPEGPPMFRPFLADPRQLTYSVGWRFNDRATVKNVIDVSFGDTLPIFRWCDIWKFRGDLQLELEGGVWAIFDPLHK SAPLIDADYYVGIPITYAFGNWALRLRGYHISTHIGDEFLINHPHFDRRNPSIEAIDLSVSWQKEQIRLYGVLGWVCCQD DSFRVGPFYLETGLELRLSQLGYRDHCNRLYSEPFFGMHFRYQSHFKKHINQTYVLGWEWGKVSGIRRKFRLFLEYHDGY SLDGQFCKRATHYLSFRGSYGF >Mature_342_residues MMRYIKPWIFLLSLNSAFLLAENFDKKMNDSSKSATISETIEASKELDNYREAHPEIYNENCWSSVEPETDAEYARSHNL WGIWLPEGPPMFRPFLADPRQLTYSVGWRFNDRATVKNVIDVSFGDTLPIFRWCDIWKFRGDLQLELEGGVWAIFDPLHK SAPLIDADYYVGIPITYAFGNWALRLRGYHISTHIGDEFLINHPHFDRRNPSIEAIDLSVSWQKEQIRLYGVLGWVCCQD DSFRVGPFYLETGLELRLSQLGYRDHCNRLYSEPFFGMHFRYQSHFKKHINQTYVLGWEWGKVSGIRRKFRLFLEYHDGY SLDGQFCKRATHYLSFRGSYGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40300; Mature: 40300
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS00256 AKH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRYIKPWIFLLSLNSAFLLAENFDKKMNDSSKSATISETIEASKELDNYREAHPEIYNE CCCHHCCEEEEEECCCEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC NCWSSVEPETDAEYARSHNLWGIWLPEGPPMFRPFLADPRQLTYSVGWRFNDRATVKNVI CCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCEE DVSFGDTLPIFRWCDIWKFRGDLQLELEGGVWAIFDPLHKSAPLIDADYYVGIPITYAFG EECCCCCCCHHHHHHHEEECCCEEEEECCCEEEEECCCCCCCCEEECCEEECCEEEEEEC NWALRLRGYHISTHIGDEFLINHPHFDRRNPSIEAIDLSVSWQKEQIRLYGVLGWVCCQD CEEEEEEEEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEECC DSFRVGPFYLETGLELRLSQLGYRDHCNRLYSEPFFGMHFRYQSHFKKHINQTYVLGWEW CCEEECCEEEECCCHHHHHHCCCHHHHHHHHCCCCCEEEEHHHHHHHHHCCCEEEEEECC GKVSGIRRKFRLFLEYHDGYSLDGQFCKRATHYLSFRGSYGF CCHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHEEECCCCCC >Mature Secondary Structure MMRYIKPWIFLLSLNSAFLLAENFDKKMNDSSKSATISETIEASKELDNYREAHPEIYNE CCCHHCCEEEEEECCCEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC NCWSSVEPETDAEYARSHNLWGIWLPEGPPMFRPFLADPRQLTYSVGWRFNDRATVKNVI CCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCEE DVSFGDTLPIFRWCDIWKFRGDLQLELEGGVWAIFDPLHKSAPLIDADYYVGIPITYAFG EECCCCCCCHHHHHHHEEECCCEEEEECCCEEEEECCCCCCCCEEECCEEECCEEEEEEC NWALRLRGYHISTHIGDEFLINHPHFDRRNPSIEAIDLSVSWQKEQIRLYGVLGWVCCQD CEEEEEEEEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEECC DSFRVGPFYLETGLELRLSQLGYRDHCNRLYSEPFFGMHFRYQSHFKKHINQTYVLGWEW CCEEECCEEEECCCHHHHHHCCCHHHHHHHHCCCCCEEEEHHHHHHHHHCCCEEEEEECC GKVSGIRRKFRLFLEYHDGYSLDGQFCKRATHYLSFRGSYGF CCHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA