Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446168
Identifier: 46446168
GI number: 46446168
Start: 666633
End: 667100
Strand: Direct
Name: 46446168
Synonym: pc0534
Alternate gene names: NA
Gene position: 666633-667100 (Clockwise)
Preceding gene: 46446165
Following gene: 46446169
Centisome position: 27.61
GC content: 33.97
Gene sequence:
>468_bases ATGCCGCATCCCCCTTGTTTTACGCCCCTTAATGCTATTATCCTTTTTAGCGCTTACCACTATCAAAATCGTTCATTGAC CTTATTTTTACTCTTTTCGACGCTTCTTTTTAGTGATCTTGTTATAGGGTTTTATTCTACATTACCGTTTGTTTATTTTA GCTTTTGTTTGATGATTTTTATAGGGCAAAAACTTAAAGAAAAAATGCCTTTACGATATCTCTTCTTCATTAGTTTACTA ACTTCTTTCCTTTTCTTTTTGATCACAAATTTCGGAGTTTGGACAGGGGGTTCTTTGTATCCAAAAACATTAGAAGGGTT AATTGCTTGCTACTTAGCCGGTATTCCTTTTTTGAGAAATCAAATATTAGGGGACGTAAGCTATAGCTTTTTGTTGTTTG GATATGTGGCATATTGGAAAAAAAATTTCTCAAGCCAATACGCCTTACGAAACTTTCAACCTATCTGA
Upstream 100 bases:
>100_bases TCAATATTTTTTGATTATCAGATGCAACAGAGTTTATATGAATACGTCTCGCTTTTTAACAATTTTTGGATTAATTTTTT TTGGAATTGCTACGCGTTTA
Downstream 100 bases:
>100_bases GAATAAACGCAAGATTTGAACTGCATTAAAAACAATTATATTTAGGTATAACTTTTAAAGAAAAGCAAAGATAAATTTGC TTAGTTTTTAGAATAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPHPPCFTPLNAIILFSAYHYQNRSLTLFLLFSTLLFSDLVIGFYSTLPFVYFSFCLMIFIGQKLKEKMPLRYLFFISLL TSFLFFLITNFGVWTGGSLYPKTLEGLIACYLAGIPFLRNQILGDVSYSFLLFGYVAYWKKNFSSQYALRNFQPI
Sequences:
>Translated_155_residues MPHPPCFTPLNAIILFSAYHYQNRSLTLFLLFSTLLFSDLVIGFYSTLPFVYFSFCLMIFIGQKLKEKMPLRYLFFISLL TSFLFFLITNFGVWTGGSLYPKTLEGLIACYLAGIPFLRNQILGDVSYSFLLFGYVAYWKKNFSSQYALRNFQPI >Mature_154_residues PHPPCFTPLNAIILFSAYHYQNRSLTLFLLFSTLLFSDLVIGFYSTLPFVYFSFCLMIFIGQKLKEKMPLRYLFFISLLT SFLFFLITNFGVWTGGSLYPKTLEGLIACYLAGIPFLRNQILGDVSYSFLLFGYVAYWKKNFSSQYALRNFQPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18012; Mature: 17880
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPPCFTPLNAIILFSAYHYQNRSLTLFLLFSTLLFSDLVIGFYSTLPFVYFSFCLMIF CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGQKLKEKMPLRYLFFISLLTSFLFFLITNFGVWTGGSLYPKTLEGLIACYLAGIPFLRN HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH QILGDVSYSFLLFGYVAYWKKNFSSQYALRNFQPI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC >Mature Secondary Structure PHPPCFTPLNAIILFSAYHYQNRSLTLFLLFSTLLFSDLVIGFYSTLPFVYFSFCLMIF CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGQKLKEKMPLRYLFFISLLTSFLFFLITNFGVWTGGSLYPKTLEGLIACYLAGIPFLRN HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH QILGDVSYSFLLFGYVAYWKKNFSSQYALRNFQPI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA