Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446150
Identifier: 46446150
GI number: 46446150
Start: 649576
End: 650175
Strand: Direct
Name: 46446150
Synonym: pc0516
Alternate gene names: NA
Gene position: 649576-650175 (Clockwise)
Preceding gene: 46446149
Following gene: 46446151
Centisome position: 26.9
GC content: 40.67
Gene sequence:
>600_bases ATGAAAAAACCTACAAACCTAAGTATTATTCGTCCGCTTTTTGCTCAATCCTCATTCACTGCAGAAGAGGTTAAACAATT TGGGGTTTCTGCTGCTCATCTTGGCTACTATATTAAGAAAGGTCTAATTAAACGACTAGGGCGCGGCATTTACCAAAGTG CAGACTATCAAGGATCTCCTGAAAATTTTCGATGGGAGGATCTTATAGAGGCTGTAAATTCTGTACCCAATGGGGTTATT TGCCTTATTTCTGCACTAGCTATCCACGATATAACCGAGGAAATTCCGCGAGAACATTGGATTGCTATACCACATACTAC TTCCATTTGTAGAGGCGCTAAAGTGAGAATTGTGAGATTCCGCAATATGGAGCTTGGAAAAACAGAACTTGACCTGGGAG GTGTTCGCATTCCTATATTTAATCGCGAACGGACCATCATCGATTCCTTTAGGCTACTGAGTCGAGAAACAGCCATCAAA GCTTTAAAAATGGCTTTATTCCAAAAAGGGACAATGCGATTGGATCTTAAAAAACTGCAGTCGTACGCAAAAAAACTTAG ATTTAACATTGCCCCCTACCTTATCACGGCAACAACATGA
Upstream 100 bases:
>100_bases ATTTCAGTAGTCTATTGAAATCTCTTGATTTAAAATTTAACACAAAAACCCAGTTGATGGAATTGGGTGTTTCTGTTAAA TTGAATACAGGAGATAACCT
Downstream 100 bases:
>100_bases ATGAACAAGGACTAAAAGATCGTCTTCAAGCTATTTCTAAAGAAAGAGGTATCAATTTCAATGAGTGCTGGAAAAAGCTG CTTCTAGAACGGTTTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKKPTNLSIIRPLFAQSSFTAEEVKQFGVSAAHLGYYIKKGLIKRLGRGIYQSADYQGSPENFRWEDLIEAVNSVPNGVI CLISALAIHDITEEIPREHWIAIPHTTSICRGAKVRIVRFRNMELGKTELDLGGVRIPIFNRERTIIDSFRLLSRETAIK ALKMALFQKGTMRLDLKKLQSYAKKLRFNIAPYLITATT
Sequences:
>Translated_199_residues MKKPTNLSIIRPLFAQSSFTAEEVKQFGVSAAHLGYYIKKGLIKRLGRGIYQSADYQGSPENFRWEDLIEAVNSVPNGVI CLISALAIHDITEEIPREHWIAIPHTTSICRGAKVRIVRFRNMELGKTELDLGGVRIPIFNRERTIIDSFRLLSRETAIK ALKMALFQKGTMRLDLKKLQSYAKKLRFNIAPYLITATT >Mature_199_residues MKKPTNLSIIRPLFAQSSFTAEEVKQFGVSAAHLGYYIKKGLIKRLGRGIYQSADYQGSPENFRWEDLIEAVNSVPNGVI CLISALAIHDITEEIPREHWIAIPHTTSICRGAKVRIVRFRNMELGKTELDLGGVRIPIFNRERTIIDSFRLLSRETAIK ALKMALFQKGTMRLDLKKLQSYAKKLRFNIAPYLITATT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22606; Mature: 22606
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPTNLSIIRPLFAQSSFTAEEVKQFGVSAAHLGYYIKKGLIKRLGRGIYQSADYQGSP CCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ENFRWEDLIEAVNSVPNGVICLISALAIHDITEEIPREHWIAIPHTTSICRGAKVRIVRF CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHCCCEEEEEEE RNMELGKTELDLGGVRIPIFNRERTIIDSFRLLSRETAIKALKMALFQKGTMRLDLKKLQ CCCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHH SYAKKLRFNIAPYLITATT HHHHHHHHCCCCEEEEECC >Mature Secondary Structure MKKPTNLSIIRPLFAQSSFTAEEVKQFGVSAAHLGYYIKKGLIKRLGRGIYQSADYQGSP CCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ENFRWEDLIEAVNSVPNGVICLISALAIHDITEEIPREHWIAIPHTTSICRGAKVRIVRF CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHCCCEEEEEEE RNMELGKTELDLGGVRIPIFNRERTIIDSFRLLSRETAIKALKMALFQKGTMRLDLKKLQ CCCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHH SYAKKLRFNIAPYLITATT HHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA