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The map label for this gene is ydiF [H]

Identifier: 46446148

GI number: 46446148

Start: 646870

End: 648495

Strand: Direct

Name: ydiF [H]

Synonym: pc0514

Alternate gene names: 46446148

Gene position: 646870-648495 (Clockwise)

Preceding gene: 46446147

Following gene: 46446149

Centisome position: 26.79

GC content: 46.8

Gene sequence:

>1626_bases
ATGTCTCGGCTTCTCATACAATTTTCACATCTTTTTAAATCTTTTCGCTCTTTTCCTCTCTTCGAGGATCTCTCCCTTTC
GATTAATGAAGGCGAACTTTTTGCCTTGATCGGCGAAAACGGGGCTGGAAAAACCACGCTGCTTCAGATTCTGGCTGGAA
CCATGCAGCCTGATTCCGGCAATTTCAGCAAAGGTTTCAGCATTTCAATCGCCTTCCTTTCACAGGAAATCGTTCTGGCC
AATCCTTCAGTCTCTGTAAGGGAATTCATAGAAGGAAATTCTCTTTCGGACCTTGAAAAAGAAATGGCAGCCTGCCTGGA
AGATCCAGACCGTTTGGCTGAATGGGCTGAGCTGCATGAGAAATACGAGCAGTTAGGCGGATACCGCCGGATTCCGATCG
AACAAGTTCTACGCGGACTGAAGCTGGAAAGCAGCCTGCTCGATCTACCTCTGTCCCGCTTAAGCAGCGGACAAAGAGTG
CGGGCAGCGCTGGCTAAAGCATTGGTAAAAAATCCGGATCTTCTGCTTTTGGATGAACCGACCAATCATCTCGACCAGGA
AATGCTTGAATGGCTGGAATCTGTTTTGAAGCAGAGGCAAGGAGCCTGCATTATCGTCTCGCACGACCGTAAATTTTTAA
ATGCCGTCTGCAATAGGCTCGTCGAAATCAAAAACGGCAAGCTCACCAGCTACGGAGGCAGCTATGACTTCTATCTTACA
GAGCAGGAAAGGATACTGGAAAGGCAGATGAAAGCCTATAAAGCTCAAGAGGAAGAAAGATCTTTTCTCAAGGAGAAAAT
CAAAGCAGTTACCTTTTCCAAAGGAAAGCCCCCTCCTCCAAAGGACCGCAATATCATAGCTTACTACGATAAAAGAGGGG
AAAAGCATCAAAAATCGCTGCAGCATAAACTCAATGCCATGAAAACCCGGCTTGAAGAAATCGAAGCCGATCTTCTTCCT
CATCCAAAGCCGAAAAGCATCAAGGGCCTCAAATTTGTTGAATTGCCTCTGGCATCTTCTGTTGCGATCGAACTGGATCA
TGCGGGCAAGGCTTATGGAAATAAAGTTTTATTTTCCCAATTTTGCAAGAGCATCTGCAAAGGAGACAAAATTCTTGTCA
CAGGCCTGAATGGATGCGGAAAGACGACGCTCTTGAAAGCGATTGCCGGAATCATTCCATTGGACGAAGGAGGTATCCGC
TCGGCACCTACCGCAAAAATCGCTTTCCTAGACCAGGAAGCCAAGTTGCTGCCTATGGATCAAACGCCTCTTCAATACTT
TGAAAGCCAGTTTCATCTATCTGAAGAGGGCTTAAGGCGCGAACTTCATAAAGCATCCTTGGAGGGAGCGGATTTGCTAA
GGCGCCCATTTTGCACATTAAGCACAGGGCAAAGAAAGCGGATGATGTTGCTCGCCCTTGTTCTGGAAAAGCCCAACGTC
CTCTTATTGGACGAACCTACGAACCATCTGGATTTCATGACCTTGGAAGCCTTTGAGAATGCCCTTCTCGAGTTCGAAGG
GGCCATCGTAGCGGTATCGCACGATGCCACCTTTATTGAAAAAATTGCTACTCAGGAATGGAGGCTTGGATCAGGAACAT
ATCCGTTTTGTGCTCAATTGGATTGA

Upstream 100 bases:

>100_bases
GGTAAAATAAAAACAATAATAACTCGTTGAAGGAGCTAGGTCTAGTGAGAATTTAAGTTTGAATCCAATCTGTTAACTAA
ACAACCCAAGGATCAAACTT

Downstream 100 bases:

>100_bases
ATCTGGAAGTGAAAACTTTCGTATACAAAAACTAGCGACTCTGGATACACATTTAGTTGCATATTTCGTGGTTGTCTCTC
CAGAAATAGATCAGATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MSRLLIQFSHLFKSFRSFPLFEDLSLSINEGELFALIGENGAGKTTLLQILAGTMQPDSGNFSKGFSISIAFLSQEIVLA
NPSVSVREFIEGNSLSDLEKEMAACLEDPDRLAEWAELHEKYEQLGGYRRIPIEQVLRGLKLESSLLDLPLSRLSSGQRV
RAALAKALVKNPDLLLLDEPTNHLDQEMLEWLESVLKQRQGACIIVSHDRKFLNAVCNRLVEIKNGKLTSYGGSYDFYLT
EQERILERQMKAYKAQEEERSFLKEKIKAVTFSKGKPPPPKDRNIIAYYDKRGEKHQKSLQHKLNAMKTRLEEIEADLLP
HPKPKSIKGLKFVELPLASSVAIELDHAGKAYGNKVLFSQFCKSICKGDKILVTGLNGCGKTTLLKAIAGIIPLDEGGIR
SAPTAKIAFLDQEAKLLPMDQTPLQYFESQFHLSEEGLRRELHKASLEGADLLRRPFCTLSTGQRKRMMLLALVLEKPNV
LLLDEPTNHLDFMTLEAFENALLEFEGAIVAVSHDATFIEKIATQEWRLGSGTYPFCAQLD

Sequences:

>Translated_541_residues
MSRLLIQFSHLFKSFRSFPLFEDLSLSINEGELFALIGENGAGKTTLLQILAGTMQPDSGNFSKGFSISIAFLSQEIVLA
NPSVSVREFIEGNSLSDLEKEMAACLEDPDRLAEWAELHEKYEQLGGYRRIPIEQVLRGLKLESSLLDLPLSRLSSGQRV
RAALAKALVKNPDLLLLDEPTNHLDQEMLEWLESVLKQRQGACIIVSHDRKFLNAVCNRLVEIKNGKLTSYGGSYDFYLT
EQERILERQMKAYKAQEEERSFLKEKIKAVTFSKGKPPPPKDRNIIAYYDKRGEKHQKSLQHKLNAMKTRLEEIEADLLP
HPKPKSIKGLKFVELPLASSVAIELDHAGKAYGNKVLFSQFCKSICKGDKILVTGLNGCGKTTLLKAIAGIIPLDEGGIR
SAPTAKIAFLDQEAKLLPMDQTPLQYFESQFHLSEEGLRRELHKASLEGADLLRRPFCTLSTGQRKRMMLLALVLEKPNV
LLLDEPTNHLDFMTLEAFENALLEFEGAIVAVSHDATFIEKIATQEWRLGSGTYPFCAQLD
>Mature_540_residues
SRLLIQFSHLFKSFRSFPLFEDLSLSINEGELFALIGENGAGKTTLLQILAGTMQPDSGNFSKGFSISIAFLSQEIVLAN
PSVSVREFIEGNSLSDLEKEMAACLEDPDRLAEWAELHEKYEQLGGYRRIPIEQVLRGLKLESSLLDLPLSRLSSGQRVR
AALAKALVKNPDLLLLDEPTNHLDQEMLEWLESVLKQRQGACIIVSHDRKFLNAVCNRLVEIKNGKLTSYGGSYDFYLTE
QERILERQMKAYKAQEEERSFLKEKIKAVTFSKGKPPPPKDRNIIAYYDKRGEKHQKSLQHKLNAMKTRLEEIEADLLPH
PKPKSIKGLKFVELPLASSVAIELDHAGKAYGNKVLFSQFCKSICKGDKILVTGLNGCGKTTLLKAIAGIIPLDEGGIRS
APTAKIAFLDQEAKLLPMDQTPLQYFESQFHLSEEGLRRELHKASLEGADLLRRPFCTLSTGQRKRMMLLALVLEKPNVL
LLDEPTNHLDFMTLEAFENALLEFEGAIVAVSHDATFIEKIATQEWRLGSGTYPFCAQLD

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=535, Percent_Identity=29.9065420560748, Blast_Score=205, Evalue=9e-53,
Organism=Homo sapiens, GI10947137, Length=537, Percent_Identity=29.9813780260708, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI27881506, Length=537, Percent_Identity=29.9813780260708, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI10947135, Length=525, Percent_Identity=31.2380952380952, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI69354671, Length=525, Percent_Identity=31.2380952380952, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI171184400, Length=260, Percent_Identity=29.6153846153846, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI153792144, Length=223, Percent_Identity=26.457399103139, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI31657092, Length=234, Percent_Identity=29.0598290598291, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI27436953, Length=223, Percent_Identity=25.5605381165919, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI255708477, Length=267, Percent_Identity=26.2172284644195, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI30795238, Length=222, Percent_Identity=28.3783783783784, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI27881501, Length=221, Percent_Identity=28.5067873303167, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI9961252, Length=391, Percent_Identity=23.7851662404092, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI4505771, Length=230, Percent_Identity=30, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI9961250, Length=391, Percent_Identity=23.7851662404092, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI42741659, Length=229, Percent_Identity=28.3842794759825, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI6005701, Length=223, Percent_Identity=23.3183856502242, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI21536378, Length=231, Percent_Identity=29.4372294372294, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI105990541, Length=225, Percent_Identity=28.4444444444444, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI148612844, Length=228, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1787041, Length=537, Percent_Identity=30.1675977653631, Blast_Score=241, Evalue=8e-65,
Organism=Escherichia coli, GI1789751, Length=522, Percent_Identity=31.2260536398467, Blast_Score=225, Evalue=5e-60,
Organism=Escherichia coli, GI2367384, Length=523, Percent_Identity=32.5047801147228, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI1787182, Length=544, Percent_Identity=30.6985294117647, Blast_Score=212, Evalue=4e-56,
Organism=Escherichia coli, GI1789891, Length=249, Percent_Identity=28.9156626506024, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1786563, Length=206, Percent_Identity=32.0388349514563, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787029, Length=232, Percent_Identity=26.7241379310345, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1790525, Length=248, Percent_Identity=23.7903225806452, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786345, Length=231, Percent_Identity=29.8701298701299, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786975, Length=235, Percent_Identity=25.9574468085106, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787758, Length=226, Percent_Identity=26.1061946902655, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1787164, Length=221, Percent_Identity=28.0542986425339, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788450, Length=241, Percent_Identity=27.8008298755187, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787547, Length=256, Percent_Identity=25.78125, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788506, Length=243, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788472, Length=232, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI48994997, Length=239, Percent_Identity=24.6861924686192, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1787105, Length=231, Percent_Identity=26.8398268398268, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788540, Length=243, Percent_Identity=30.4526748971193, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1788165, Length=184, Percent_Identity=25.5434782608696, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1789991, Length=266, Percent_Identity=25.187969924812, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=519, Percent_Identity=29.0944123314065, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17555318, Length=523, Percent_Identity=27.151051625239, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17553372, Length=517, Percent_Identity=29.7872340425532, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17541710, Length=247, Percent_Identity=30.3643724696356, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=244, Percent_Identity=27.0491803278689, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=242, Percent_Identity=26.4462809917355, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=228, Percent_Identity=27.1929824561404, Blast_Score=69, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=222, Percent_Identity=27.9279279279279, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=535, Percent_Identity=31.214953271028, Blast_Score=202, Evalue=7e-53,
Organism=Saccharomyces cerevisiae, GI6321121, Length=558, Percent_Identity=27.0609318996416, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6324314, Length=215, Percent_Identity=28.8372093023256, Blast_Score=93, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6323278, Length=239, Percent_Identity=26.7782426778243, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6325030, Length=222, Percent_Identity=27.4774774774775, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24642252, Length=531, Percent_Identity=29.5668549905838, Blast_Score=206, Evalue=4e-53,
Organism=Drosophila melanogaster, GI18859989, Length=531, Percent_Identity=29.5668549905838, Blast_Score=206, Evalue=4e-53,
Organism=Drosophila melanogaster, GI24666836, Length=548, Percent_Identity=28.8321167883212, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24641342, Length=535, Percent_Identity=28.9719626168224, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24659289, Length=247, Percent_Identity=25.5060728744939, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI281362751, Length=216, Percent_Identity=25.462962962963, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650853, Length=216, Percent_Identity=25.462962962963, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24650855, Length=216, Percent_Identity=25.462962962963, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17136662, Length=231, Percent_Identity=26.8398268398268, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60718; Mature: 60587

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLIQFSHLFKSFRSFPLFEDLSLSINEGELFALIGENGAGKTTLLQILAGTMQPDSG
CCHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCC
NFSKGFSISIAFLSQEIVLANPSVSVREFIEGNSLSDLEKEMAACLEDPDRLAEWAELHE
CCCCCCEEEEEEECCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
KYEQLGGYRRIPIEQVLRGLKLESSLLDLPLSRLSSGQRVRAALAKALVKNPDLLLLDEP
HHHHHCCEECCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECC
TNHLDQEMLEWLESVLKQRQGACIIVSHDRKFLNAVCNRLVEIKNGKLTSYGGSYDFYLT
CCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEC
EQERILERQMKAYKAQEEERSFLKEKIKAVTFSKGKPPPPKDRNIIAYYDKRGEKHQKSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHH
QHKLNAMKTRLEEIEADLLPHPKPKSIKGLKFVELPLASSVAIELDHAGKAYGNKVLFSQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHCCHHHHHH
FCKSICKGDKILVTGLNGCGKTTLLKAIAGIIPLDEGGIRSAPTAKIAFLDQEAKLLPMD
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
QTPLQYFESQFHLSEEGLRRELHKASLEGADLLRRPFCTLSTGQRKRMMLLALVLEKPNV
CCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCE
LLLDEPTNHLDFMTLEAFENALLEFEGAIVAVSHDATFIEKIATQEWRLGSGTYPFCAQL
EEEECCCCCCHHEEHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCEECC
D
C
>Mature Secondary Structure 
SRLLIQFSHLFKSFRSFPLFEDLSLSINEGELFALIGENGAGKTTLLQILAGTMQPDSG
CHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCC
NFSKGFSISIAFLSQEIVLANPSVSVREFIEGNSLSDLEKEMAACLEDPDRLAEWAELHE
CCCCCCEEEEEEECCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
KYEQLGGYRRIPIEQVLRGLKLESSLLDLPLSRLSSGQRVRAALAKALVKNPDLLLLDEP
HHHHHCCEECCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECC
TNHLDQEMLEWLESVLKQRQGACIIVSHDRKFLNAVCNRLVEIKNGKLTSYGGSYDFYLT
CCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEC
EQERILERQMKAYKAQEEERSFLKEKIKAVTFSKGKPPPPKDRNIIAYYDKRGEKHQKSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHH
QHKLNAMKTRLEEIEADLLPHPKPKSIKGLKFVELPLASSVAIELDHAGKAYGNKVLFSQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHCCHHHHHH
FCKSICKGDKILVTGLNGCGKTTLLKAIAGIIPLDEGGIRSAPTAKIAFLDQEAKLLPMD
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
QTPLQYFESQFHLSEEGLRRELHKASLEGADLLRRPFCTLSTGQRKRMMLLALVLEKPNV
CCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCE
LLLDEPTNHLDFMTLEAFENALLEFEGAIVAVSHDATFIEKIATQEWRLGSGTYPFCAQL
EEEECCCCCCHHEEHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCEECC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]