Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is yeaZ [C]
Identifier: 46446100
GI number: 46446100
Start: 599821
End: 600489
Strand: Direct
Name: yeaZ [C]
Synonym: pc0466
Alternate gene names: 46446100
Gene position: 599821-600489 (Clockwise)
Preceding gene: 46446099
Following gene: 46446101
Centisome position: 24.84
GC content: 38.57
Gene sequence:
>669_bases TTGATTGAAACAAGTACGGAAAGAGGGGTTTTTGGCCTTTCACAAGATGAAAAAATTCTTTTCTGTGAAGAACTACCTTT TGGGATGACTCAGTCTCGTTTTTTGATGCCTCGATTGGCTGAGTTTATTCAACAGAATTCCTTACGTTCTGAAGATTTAA CTTTTATTGGCATAGGGACTGGGCCTGGCTCTTATACGGGAATTCGTGTAGGTATGGCTGTGGCTCAAGCTTTGTCTTAT AGTTGGAAAATACCTCTTGTCGGCGTGTCAAGTCTAGATGGTTTTGTTCCATCTAAAAAGAATGTTCCTTTTGCAGCTAT CATTGATGCGCGAATTGGAGGTGCTTATGTACGCAAAGGCATATTAACTGATCAGGGGATTGATTATTTATGTGAACCCT CGATTTACTCTCTTGCCGAGTTGGGAACTTTTTTAAAGGATGTCAAAATTTTAGTGACTCCTTTCTTTCCATCATTGAAA TTAAAATTAGAGAAGCAATATCCAGACCTAATGTGGACCTGGGAGGAAAAAGCCCCCTCCTTAGATGCTTTAGCTCATAG AATGAATCTGGCTTATCGAAACGAAGCTTGGAGAAATAAGGGGCATTTAGAGCTTTTATATTTAAAAGAAACGGAAGCTG AACGAGAAAAAAATAAATCATCATCTTAA
Upstream 100 bases:
>100_bases TAGATTATATATCAGGAATGACAGATAACTTTTTTGTTCGTACCTTAGAAAAAATTATTGTTCCTAGTAAAATCGAGTTT GACAAATGAGTCGTTTTTTA
Downstream 100 bases:
>100_bases CTAAGCTCTTCTTTTTAACGTCAAATTATTATTTGAATATTCAAATTTATCCCCTGTTTTTTGCAAGAAGTCTATTGATT AATATCCTCTATTTGAGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: O-Sialoglycoprotein Endopeptidase; Protease; HAD-Superfamily Hydrolase; Glycoprotease Family Exported Protein
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MIETSTERGVFGLSQDEKILFCEELPFGMTQSRFLMPRLAEFIQQNSLRSEDLTFIGIGTGPGSYTGIRVGMAVAQALSY SWKIPLVGVSSLDGFVPSKKNVPFAAIIDARIGGAYVRKGILTDQGIDYLCEPSIYSLAELGTFLKDVKILVTPFFPSLK LKLEKQYPDLMWTWEEKAPSLDALAHRMNLAYRNEAWRNKGHLELLYLKETEAEREKNKSSS
Sequences:
>Translated_222_residues MIETSTERGVFGLSQDEKILFCEELPFGMTQSRFLMPRLAEFIQQNSLRSEDLTFIGIGTGPGSYTGIRVGMAVAQALSY SWKIPLVGVSSLDGFVPSKKNVPFAAIIDARIGGAYVRKGILTDQGIDYLCEPSIYSLAELGTFLKDVKILVTPFFPSLK LKLEKQYPDLMWTWEEKAPSLDALAHRMNLAYRNEAWRNKGHLELLYLKETEAEREKNKSSS >Mature_222_residues MIETSTERGVFGLSQDEKILFCEELPFGMTQSRFLMPRLAEFIQQNSLRSEDLTFIGIGTGPGSYTGIRVGMAVAQALSY SWKIPLVGVSSLDGFVPSKKNVPFAAIIDARIGGAYVRKGILTDQGIDYLCEPSIYSLAELGTFLKDVKILVTPFFPSLK LKLEKQYPDLMWTWEEKAPSLDALAHRMNLAYRNEAWRNKGHLELLYLKETEAEREKNKSSS
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24952; Mature: 24952
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIETSTERGVFGLSQDEKILFCEELPFGMTQSRFLMPRLAEFIQQNSLRSEDLTFIGIGT CCCCCCCCCEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC GPGSYTGIRVGMAVAQALSYSWKIPLVGVSSLDGFVPSKKNVPFAAIIDARIGGAYVRKG CCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHC ILTDQGIDYLCEPSIYSLAELGTFLKDVKILVTPFFPSLKLKLEKQYPDLMWTWEEKAPS CCCCCCCCEEECCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCEEEEECCCCCC LDALAHRMNLAYRNEAWRNKGHLELLYLKETEAEREKNKSSS HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCCC >Mature Secondary Structure MIETSTERGVFGLSQDEKILFCEELPFGMTQSRFLMPRLAEFIQQNSLRSEDLTFIGIGT CCCCCCCCCEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC GPGSYTGIRVGMAVAQALSYSWKIPLVGVSSLDGFVPSKKNVPFAAIIDARIGGAYVRKG CCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHC ILTDQGIDYLCEPSIYSLAELGTFLKDVKILVTPFFPSLKLKLEKQYPDLMWTWEEKAPS CCCCCCCCEEECCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCEEEEECCCCCC LDALAHRMNLAYRNEAWRNKGHLELLYLKETEAEREKNKSSS HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA