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The map label for this gene is rplX

Identifier: 46446057

GI number: 46446057

Start: 554329

End: 554679

Strand: Direct

Name: rplX

Synonym: pc0423

Alternate gene names: 46446057

Gene position: 554329-554679 (Clockwise)

Preceding gene: 46446056

Following gene: 46446058

Centisome position: 22.96

GC content: 39.03

Gene sequence:

>351_bases
ATGGATAATAAGCCAAGTGGATCAAAAAAAATTCGCCAAGGTGACACAGTTGTTGCTATTGCTGGTAACAGCCGAGGTCA
GATAGGAACTGTACAATCATGTAAGGGTGATAGAGTAATAGTTCAAGGCCTTAATGTACGCAAGAAACACGTTAAACGAA
GCCAAGAAGCTCCTAAGGGCAGAATTGTTGAAATTGAAAGACCGATCCACATTTCAAATTTGAAAGTTTGTGTGGAAGGA
GAAACAACGGCAAAGTTGAAAGTTCGTACTAATGAACAAGGACATCGTCAATTTGTTTATCACAAAGACGATCAAGAAGT
AGTCTACCGTTCAGTCAAAAAACCTAAGTGA

Upstream 100 bases:

>100_bases
GTATCTTTGGACCTGTTGCACGTGAAGTGCGCGATAGAGACTTTTTAAAGATTAGTTCTCTCGCACCAGAAGTGATTTAA
TAAGTGAGGCAATGACGAAA

Downstream 100 bases:

>100_bases
GTAGAAAAAGCCAATGTCCAGGTTAAAGAAAAGATATTTAGCTGATGTAAAACCAGAATTGCAAAAAAAATTTGCATATA
AGAACCTGATGCAGGTACCT

Product: 50S ribosomal protein L24

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MDNKPSGSKKIRQGDTVVAIAGNSRGQIGTVQSCKGDRVIVQGLNVRKKHVKRSQEAPKGRIVEIERPIHISNLKVCVEG
ETTAKLKVRTNEQGHRQFVYHKDDQEVVYRSVKKPK

Sequences:

>Translated_116_residues
MDNKPSGSKKIRQGDTVVAIAGNSRGQIGTVQSCKGDRVIVQGLNVRKKHVKRSQEAPKGRIVEIERPIHISNLKVCVEG
ETTAKLKVRTNEQGHRQFVYHKDDQEVVYRSVKKPK
>Mature_116_residues
MDNKPSGSKKIRQGDTVVAIAGNSRGQIGTVQSCKGDRVIVQGLNVRKKHVKRSQEAPKGRIVEIERPIHISNLKVCVEG
ETTAKLKVRTNEQGHRQFVYHKDDQEVVYRSVKKPK

Specific function: One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24_PARUW (Q6ME52)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_007422.1
- ProteinModelPortal:   Q6ME52
- SMR:   Q6ME52
- STRING:   Q6ME52
- GeneID:   2780811
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc0423
- NMPDR:   fig|264201.1.peg.423
- eggNOG:   COG0198
- HOGENOM:   HBG588578
- OMA:   RTKNIKR
- ProtClustDB:   PRK00004
- BioCyc:   CPRO264201:PC0423-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01326_B
- InterPro:   IPR003256
- InterPro:   IPR014723
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.200
- PANTHER:   PTHR12903
- TIGRFAMs:   TIGR01079

Pfam domain/function: SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 13027; Mature: 13027

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKPSGSKKIRQGDTVVAIAGNSRGQIGTVQSCKGDRVIVQGLNVRKKHVKRSQEAPKG
CCCCCCCCCEEECCCEEEEEECCCCCCCCEECCCCCCEEEEECCCCHHHHHHHCCCCCCC
RIVEIERPIHISNLKVCVEGETTAKLKVRTNEQGHRQFVYHKDDQEVVYRSVKKPK
CEEEEECCEEECCEEEEEECCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCC
>Mature Secondary Structure
MDNKPSGSKKIRQGDTVVAIAGNSRGQIGTVQSCKGDRVIVQGLNVRKKHVKRSQEAPKG
CCCCCCCCCEEECCCEEEEEECCCCCCCCEECCCCCCEEEEECCCCHHHHHHHCCCCCCC
RIVEIERPIHISNLKVCVEGETTAKLKVRTNEQGHRQFVYHKDDQEVVYRSVKKPK
CEEEEECCEEECCEEEEEECCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA