Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446045
Identifier: 46446045
GI number: 46446045
Start: 547458
End: 548015
Strand: Direct
Name: 46446045
Synonym: pc0411
Alternate gene names: NA
Gene position: 547458-548015 (Clockwise)
Preceding gene: 46446044
Following gene: 161611308
Centisome position: 22.67
GC content: 35.13
Gene sequence:
>558_bases ATGCCTTCAAAACTACAACGGCATGAATGGCTAATTGTCTCTATTCTTATCACAACTCTAATTTTATTGACTGGTATGGC TTTTTTTTCAAAAAAAAGAGTTTTGCCAATACCTCGGACAGAACACTTGTTAACAACAGAATTGGTGGATGTTACTGTTC AGGGAGCAGCCGAGCATATAGGGATTTTTGAACTCCGTAAAGGAGCTAGGATAAAAGATCTTTGGAAGCTTTGTAAACCA ACTTTTGATGCTGATTTAAGCAGTTTTAAACCTAATCAACTTTTGCGTGATGGACAAGTGATTAAAATTCCTTTAAAAGA ATATTTGACGGTTTATATTAGAGGAGCCGTTCAACAAGAGGTGGTCCTCCGCGTTTTAAAAGGAACTCAGCTCAAAGATC TTAAAGACATGATTGTGCTGCAAAAAGATGCGGATATCAAAATTCTAAATGCAAAGCGCCGTTTAAAAGATCAAGAAGTC ATTCACATTCGATCTAAAAAAATCTCTAAAAATGCACAAAAGATATTAGATAAAAAAATCGAACCTAAAGTTGAGTGA
Upstream 100 bases:
>100_bases CTAAGAAGAATATTTAGATATTCTATTCAAAAAAAAATTAATGTTTTTTTACAATTCATCTAGTAGACTCTTTGCAAAAC CTTGCAAAGGAGAGAATCTT
Downstream 100 bases:
>100_bases ATAACAATGACGTCAAAAAAGTAATTGAGTTTATAAAAACTGAATCTCTTCTTTAAGCATTTTTGAGAGTTCTTATGAAC CAAAGCGTTGATTTTTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPSKLQRHEWLIVSILITTLILLTGMAFFSKKRVLPIPRTEHLLTTELVDVTVQGAAEHIGIFELRKGARIKDLWKLCKP TFDADLSSFKPNQLLRDGQVIKIPLKEYLTVYIRGAVQQEVVLRVLKGTQLKDLKDMIVLQKDADIKILNAKRRLKDQEV IHIRSKKISKNAQKILDKKIEPKVE
Sequences:
>Translated_185_residues MPSKLQRHEWLIVSILITTLILLTGMAFFSKKRVLPIPRTEHLLTTELVDVTVQGAAEHIGIFELRKGARIKDLWKLCKP TFDADLSSFKPNQLLRDGQVIKIPLKEYLTVYIRGAVQQEVVLRVLKGTQLKDLKDMIVLQKDADIKILNAKRRLKDQEV IHIRSKKISKNAQKILDKKIEPKVE >Mature_184_residues PSKLQRHEWLIVSILITTLILLTGMAFFSKKRVLPIPRTEHLLTTELVDVTVQGAAEHIGIFELRKGARIKDLWKLCKPT FDADLSSFKPNQLLRDGQVIKIPLKEYLTVYIRGAVQQEVVLRVLKGTQLKDLKDMIVLQKDADIKILNAKRRLKDQEVI HIRSKKISKNAQKILDKKIEPKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21293; Mature: 21162
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKLQRHEWLIVSILITTLILLTGMAFFSKKRVLPIPRTEHLLTTELVDVTVQGAAEHI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHH GIFELRKGARIKDLWKLCKPTFDADLSSFKPNQLLRDGQVIKIPLKEYLTVYIRGAVQQE HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHH VVLRVLKGTQLKDLKDMIVLQKDADIKILNAKRRLKDQEVIHIRSKKISKNAQKILDKKI HHHHHHCCCCHHHHHHHHEEECCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC EPKVE CCCCC >Mature Secondary Structure PSKLQRHEWLIVSILITTLILLTGMAFFSKKRVLPIPRTEHLLTTELVDVTVQGAAEHI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHH GIFELRKGARIKDLWKLCKPTFDADLSSFKPNQLLRDGQVIKIPLKEYLTVYIRGAVQQE HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHH VVLRVLKGTQLKDLKDMIVLQKDADIKILNAKRRLKDQEVIHIRSKKISKNAQKILDKKI HHHHHHCCCCHHHHHHHHEEECCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC EPKVE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA