The gene/protein map for NC_005861 is currently unavailable.
Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445686

Identifier: 46445686

GI number: 46445686

Start: 95214

End: 96353

Strand: Reverse

Name: 46445686

Synonym: pc0052

Alternate gene names: NA

Gene position: 96353-95214 (Counterclockwise)

Preceding gene: 46445687

Following gene: 46445685

Centisome position: 3.99

GC content: 42.81

Gene sequence:

>1140_bases
ATGCAAGCTCTTGCCCACAAAATGAACACTTGTTTTATTCTTTACTCATTTTCTTTCGAAAATACAGATGACATTGCCAC
TTGGATTATTCCTTCTCAAGGCGAAATCGTTTGTCAGCAGCTTTCTCTTGGAATTTTGACAGAAGAGGTCAAAGAAGCAG
CGCAGGTTTTCAAAACGTTCCCTTTTATTGTTGAGCCAACAGTTGCTAAAAGAAGACCTTTTCTGCGTCCGAAAAAAACT
CGTAGTTCTGCTACGTATAATGTTCCAGATGAGTTAACTCGAGGAGATCCCGATAAGAGTGCAACCTCTGCTGTTTTGCA
ATCTTTTAAAGAACGCCTTTCTCTCTGGTATGAAACTTTGATTGCTCCACTTGAATCTCATCTCCCCAAAGATCCACAAC
AAGTCGTGACGATTATTCCCGATGGTTTTCTCGCTCAAATTCCATTCGCTGCCTTTTTAGATAAAGAGGGAAAATATTTC
ATAGAAAAACATCCCATTTCCATTGCCCCCTCTATTGGCATACTCAAATTATTGGATGAAATTCCTAAAGATTTCTCAGA
AAATTCTCTCGTGATTGGTAATCCCACAACACCTCATCCAAAAGATTCGTTACCATTTGCGGAAAAAGAAGCTCAAGCCA
TTGTCGCTCCTCTGCTTAAAACAACTCCGGAAAAAACTCTCTTACAAGACAGCGCTACAGTCCAGCGCGTTTTAGAGGGG
ATGCGAGATGCACGCTGGATTCATCTTGTTTGTCATGGTTCGACAGGCGAAAAGCCCGAAGAAAAGCTTGATCCTCATTC
CGTTTTTGAAGGTCTTTTCAAGCTTGCTCCCGAACAAAAGAATCCTAATGGCTATCTTCATGCGCAAGAAATTGCGGTGC
TTAGGCTGCGTACAGAGTTGGTTTTTATGAGTGCCTGTTTCTCTGGTAGAGGCAAGCTTCACGGGGAAGGAAGCGTTGGT
CCCGTCTGGTCCTTTCTTGCCGCAGGCGCTTTGTCAACGGTCGCGACTTATTGGAGACTGCCAGATAGTGATCTAACCCT
TCAAATGGTCGACACGTTCTATCGCCATCTTTTAGGCATTAGAAATGGAAAAGCTAAACAAAGCCCAAGCTTTGCAAAAA
GCCATGATAATGGCTATTAG

Upstream 100 bases:

>100_bases
CACAGATTTTAGACGTTCGCGTGCCTTAGTCTCTACTCTTACAAAAAAAATTCAACTTCAAAAGGAAGATTTTTTAACTT
CTGGAGTCACAATCCAGGAA

Downstream 100 bases:

>100_bases
ACAAAAACGTGAACAACCTCATCTATGGGGAGCTTTTTTCTTATCGGGACTACATGAATAAACAATTATAAATTGTTAGT
TATTTATAGTTTGCTCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MQALAHKMNTCFILYSFSFENTDDIATWIIPSQGEIVCQQLSLGILTEEVKEAAQVFKTFPFIVEPTVAKRRPFLRPKKT
RSSATYNVPDELTRGDPDKSATSAVLQSFKERLSLWYETLIAPLESHLPKDPQQVVTIIPDGFLAQIPFAAFLDKEGKYF
IEKHPISIAPSIGILKLLDEIPKDFSENSLVIGNPTTPHPKDSLPFAEKEAQAIVAPLLKTTPEKTLLQDSATVQRVLEG
MRDARWIHLVCHGSTGEKPEEKLDPHSVFEGLFKLAPEQKNPNGYLHAQEIAVLRLRTELVFMSACFSGRGKLHGEGSVG
PVWSFLAAGALSTVATYWRLPDSDLTLQMVDTFYRHLLGIRNGKAKQSPSFAKSHDNGY

Sequences:

>Translated_379_residues
MQALAHKMNTCFILYSFSFENTDDIATWIIPSQGEIVCQQLSLGILTEEVKEAAQVFKTFPFIVEPTVAKRRPFLRPKKT
RSSATYNVPDELTRGDPDKSATSAVLQSFKERLSLWYETLIAPLESHLPKDPQQVVTIIPDGFLAQIPFAAFLDKEGKYF
IEKHPISIAPSIGILKLLDEIPKDFSENSLVIGNPTTPHPKDSLPFAEKEAQAIVAPLLKTTPEKTLLQDSATVQRVLEG
MRDARWIHLVCHGSTGEKPEEKLDPHSVFEGLFKLAPEQKNPNGYLHAQEIAVLRLRTELVFMSACFSGRGKLHGEGSVG
PVWSFLAAGALSTVATYWRLPDSDLTLQMVDTFYRHLLGIRNGKAKQSPSFAKSHDNGY
>Mature_379_residues
MQALAHKMNTCFILYSFSFENTDDIATWIIPSQGEIVCQQLSLGILTEEVKEAAQVFKTFPFIVEPTVAKRRPFLRPKKT
RSSATYNVPDELTRGDPDKSATSAVLQSFKERLSLWYETLIAPLESHLPKDPQQVVTIIPDGFLAQIPFAAFLDKEGKYF
IEKHPISIAPSIGILKLLDEIPKDFSENSLVIGNPTTPHPKDSLPFAEKEAQAIVAPLLKTTPEKTLLQDSATVQRVLEG
MRDARWIHLVCHGSTGEKPEEKLDPHSVFEGLFKLAPEQKNPNGYLHAQEIAVLRLRTELVFMSACFSGRGKLHGEGSVG
PVWSFLAAGALSTVATYWRLPDSDLTLQMVDTFYRHLLGIRNGKAKQSPSFAKSHDNGY

Specific function: Unknown

COG id: COG4995

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42229; Mature: 42229

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALAHKMNTCFILYSFSFENTDDIATWIIPSQGEIVCQQLSLGILTEEVKEAAQVFKTF
CCHHHHHCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PFIVEPTVAKRRPFLRPKKTRSSATYNVPDELTRGDPDKSATSAVLQSFKERLSLWYETL
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IAPLESHLPKDPQQVVTIIPDGFLAQIPFAAFLDKEGKYFIEKHPISIAPSIGILKLLDE
HHHHHHHCCCCHHHEEEECCCCHHHHCCHHHHHCCCCCEEEEECCCEECCCHHHHHHHHH
IPKDFSENSLVIGNPTTPHPKDSLPFAEKEAQAIVAPLLKTTPEKTLLQDSATVQRVLEG
HHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MRDARWIHLVCHGSTGEKPEEKLDPHSVFEGLFKLAPEQKNPNGYLHAQEIAVLRLRTEL
HCCCEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHH
VFMSACFSGRGKLHGEGSVGPVWSFLAAGALSTVATYWRLPDSDLTLQMVDTFYRHLLGI
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
RNGKAKQSPSFAKSHDNGY
CCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MQALAHKMNTCFILYSFSFENTDDIATWIIPSQGEIVCQQLSLGILTEEVKEAAQVFKTF
CCHHHHHCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PFIVEPTVAKRRPFLRPKKTRSSATYNVPDELTRGDPDKSATSAVLQSFKERLSLWYETL
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IAPLESHLPKDPQQVVTIIPDGFLAQIPFAAFLDKEGKYFIEKHPISIAPSIGILKLLDE
HHHHHHHCCCCHHHEEEECCCCHHHHCCHHHHHCCCCCEEEEECCCEECCCHHHHHHHHH
IPKDFSENSLVIGNPTTPHPKDSLPFAEKEAQAIVAPLLKTTPEKTLLQDSATVQRVLEG
HHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MRDARWIHLVCHGSTGEKPEEKLDPHSVFEGLFKLAPEQKNPNGYLHAQEIAVLRLRTEL
HCCCEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHH
VFMSACFSGRGKLHGEGSVGPVWSFLAAGALSTVATYWRLPDSDLTLQMVDTFYRHLLGI
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
RNGKAKQSPSFAKSHDNGY
CCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA