| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is flgK
Identifier: 45659268
GI number: 45659268
Start: 4227417
End: 4229327
Strand: Reverse
Name: flgK
Synonym: LIC13451
Alternate gene names: 45659268
Gene position: 4229327-4227417 (Counterclockwise)
Preceding gene: 45659269
Following gene: 45659267
Centisome position: 98.88
GC content: 39.51
Gene sequence:
>1911_bases ATGGGTTCTACATTTTCAGGTCTTGAAATCGGAAAGCGGGGTTTAACCGCTCATCAGCAAGCGCTTCAAACTACAGGTCA TAATATTTCTAATGCAGATAACAAACATTATGCGAGACAAAGGGTTACGATGACGGCAATGGATCCATTATACGATCCTT CTTTGAATCGTGCCAACCTTCCAGGACAAATTGGTCAAGGAGTTGAAATTGCTTCTATCGAAAGAATCCGAGATAATTTT ATTGACGATAGAATTATTGAAACTTCTGGAAATAAAGATTATTGGGCGGCTCGTAACGAGTATTTGTATCAATTGGAAAC TGTTTTTAACGAGCCCAACGGTACTACTCTTAGAACTTTGATGGATAAATTTTGGTCTTCTTGGGAAGATTTGGCGAACT ATCCCGAAGATAACGCACATCGTTCTGTTGTTTTAGAAAAAGCAAATGGGCTCGGAAGTAGAACTGAAGACGTTTATCGT AAACTCGCACAACTCAGAGATCAAGCGAACCGTGAAATTGAAACAAAAACGTATCATTTAAATACAATTGCGGAAAACAT TCGTACTTTAAATGAAAGGATCGGAAAATCGGAAGCGTTAGGCGATAGACCAAACGATCTTTACGATAAACGAGACGCAC TTTTACAAGAACTTTCTTCTTTGGTGGACGTTACAATTGGTCGTTCCGATGAGGATGAGCTGATGGTTTTTATCGGTCAG CAAATTCTAGTTCAAGGAAATAAAGCGAATAAAATTGATATTATAGGAAACCCTTCTAAAGATGGACTCTTGGATTTATT TTGGTCCGCGACTGGAGATCCTGTTCTTTTGAGAAAAGGAAGATTGCAAGGTTTGATCGAAGTAAGAGACAAGGTCATCC GAGAGAAAATCGATCAAGTAGACGCACTTTCCATAAATGTAATGGATGCGGTAAACGAAATTCACAAAGACGGTTTTGGA ATTAACGGAAATACAAATCAATCTTTCTTTAATATTCGTTCTTTATCGATCAATACATTTGGAGAATATGATTCCAACGG AGATGGTCAAAACGACGTTACTGCAATTTTTAGAGTAACTGGAAGGAATACTGTAGATCCGGATCGCCCCATCGGAATAA ACGGAACGATCACTTTTCATCAATCGGATGCAAAAGAATCTCCCATCTTAATTCCGTATTCTTCTAACGATACGTTAAAC GGAATCATTAAGAAGATCAATGCTTCTCGTTCTGGTGTTGTGGCTTATATGAACCATGACAATCAACTAGCACTAAAAGC TACAGTTGCTGACGATCATCCAAATAAAAATTTTATTCTAAGACATATCGAAGATTCGGGAGATCTTCTTGTGGGAATGA CCGGAATCCTAATGGCTTCAGGACCTTCCGGTGCATATGACTACAGACGTCTTGGAGAAATTAATAAGTTACAAGTTCGT TCGGAAGATGTTACGTTAACTCCTCATTTCCATCCTGCTTCTCACTTTAGAGTTGCTGACTCAATTGCGAATAACGTTTC AAATATAGCGGCCGCTCGAGGTAAGGACGTAGGAGGAACGGGAGATTATAATTCACCCGGAGGCCATAAGGACGGAAGAA ACGCTCTCATGGTTGCGTCTGCTCTGAGAAACAGTCCGGTTATGGTGGATTATTCTAAAACGACCGACGACTTTTATAAC ACTTTGATTTCTAAATTGGGAACCGAAGCGAGGGAAGCAAAACAGGAATTTGGAATTCAAAACGATCTTATGACCGAACT AGAAAACATGAGACAATCTGTCATGGGAGTCAACCTGGACGAAGAAATGGCCAACATGGTTCAGTTTCAACATGCTTATA ACGCGTCCGCAAAGATGATCAATACTATGAACGAAATTCTAGATACGATCATCAATCGATTAGGTGTTTGA
Upstream 100 bases:
>100_bases GCTCCGGAAAAAATCCAGAACGTAAACAAACCAAAAGACAATCTTTGATGCTAAATGCGTCAGCGTAAATTAATCGAATC ATTTGTTATAGGAGGCAGCC
Downstream 100 bases:
>100_bases TCTTGCGGTGATACAGACGAGTAAGGAGAGAATTTTATGATGCGTATAACGAACATGATGCAGAACAATAGTCTGATCCA TAATTTAAACAGACATCAGC
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 636; Mature: 635
Protein sequence:
>636_residues MGSTFSGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANLPGQIGQGVEIASIERIRDNF IDDRIIETSGNKDYWAARNEYLYQLETVFNEPNGTTLRTLMDKFWSSWEDLANYPEDNAHRSVVLEKANGLGSRTEDVYR KLAQLRDQANREIETKTYHLNTIAENIRTLNERIGKSEALGDRPNDLYDKRDALLQELSSLVDVTIGRSDEDELMVFIGQ QILVQGNKANKIDIIGNPSKDGLLDLFWSATGDPVLLRKGRLQGLIEVRDKVIREKIDQVDALSINVMDAVNEIHKDGFG INGNTNQSFFNIRSLSINTFGEYDSNGDGQNDVTAIFRVTGRNTVDPDRPIGINGTITFHQSDAKESPILIPYSSNDTLN GIIKKINASRSGVVAYMNHDNQLALKATVADDHPNKNFILRHIEDSGDLLVGMTGILMASGPSGAYDYRRLGEINKLQVR SEDVTLTPHFHPASHFRVADSIANNVSNIAAARGKDVGGTGDYNSPGGHKDGRNALMVASALRNSPVMVDYSKTTDDFYN TLISKLGTEAREAKQEFGIQNDLMTELENMRQSVMGVNLDEEMANMVQFQHAYNASAKMINTMNEILDTIINRLGV
Sequences:
>Translated_636_residues MGSTFSGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANLPGQIGQGVEIASIERIRDNF IDDRIIETSGNKDYWAARNEYLYQLETVFNEPNGTTLRTLMDKFWSSWEDLANYPEDNAHRSVVLEKANGLGSRTEDVYR KLAQLRDQANREIETKTYHLNTIAENIRTLNERIGKSEALGDRPNDLYDKRDALLQELSSLVDVTIGRSDEDELMVFIGQ QILVQGNKANKIDIIGNPSKDGLLDLFWSATGDPVLLRKGRLQGLIEVRDKVIREKIDQVDALSINVMDAVNEIHKDGFG INGNTNQSFFNIRSLSINTFGEYDSNGDGQNDVTAIFRVTGRNTVDPDRPIGINGTITFHQSDAKESPILIPYSSNDTLN GIIKKINASRSGVVAYMNHDNQLALKATVADDHPNKNFILRHIEDSGDLLVGMTGILMASGPSGAYDYRRLGEINKLQVR SEDVTLTPHFHPASHFRVADSIANNVSNIAAARGKDVGGTGDYNSPGGHKDGRNALMVASALRNSPVMVDYSKTTDDFYN TLISKLGTEAREAKQEFGIQNDLMTELENMRQSVMGVNLDEEMANMVQFQHAYNASAKMINTMNEILDTIINRLGV >Mature_635_residues GSTFSGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANLPGQIGQGVEIASIERIRDNFI DDRIIETSGNKDYWAARNEYLYQLETVFNEPNGTTLRTLMDKFWSSWEDLANYPEDNAHRSVVLEKANGLGSRTEDVYRK LAQLRDQANREIETKTYHLNTIAENIRTLNERIGKSEALGDRPNDLYDKRDALLQELSSLVDVTIGRSDEDELMVFIGQQ ILVQGNKANKIDIIGNPSKDGLLDLFWSATGDPVLLRKGRLQGLIEVRDKVIREKIDQVDALSINVMDAVNEIHKDGFGI NGNTNQSFFNIRSLSINTFGEYDSNGDGQNDVTAIFRVTGRNTVDPDRPIGINGTITFHQSDAKESPILIPYSSNDTLNG IIKKINASRSGVVAYMNHDNQLALKATVADDHPNKNFILRHIEDSGDLLVGMTGILMASGPSGAYDYRRLGEINKLQVRS EDVTLTPHFHPASHFRVADSIANNVSNIAAARGKDVGGTGDYNSPGGHKDGRNALMVASALRNSPVMVDYSKTTDDFYNT LISKLGTEAREAKQEFGIQNDLMTELENMRQSVMGVNLDEEMANMVQFQHAYNASAKMINTMNEILDTIINRLGV
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=333, Percent_Identity=27.6276276276276, Blast_Score=109, Evalue=5e-25,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR002371 - InterPro: IPR010810 [H]
Pfam domain/function: PF06429 DUF1078; PF07196 Flagellin_IN [H]
EC number: NA
Molecular weight: Translated: 70655; Mature: 70524
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTFSGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANL CCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCC PGQIGQGVEIASIERIRDNFIDDRIIETSGNKDYWAARNEYLYQLETVFNEPNGTTLRTL CCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH MDKFWSSWEDLANYPEDNAHRSVVLEKANGLGSRTEDVYRKLAQLRDQANREIETKTYHL HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEH NTIAENIRTLNERIGKSEALGDRPNDLYDKRDALLQELSSLVDVTIGRSDEDELMVFIGQ HHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC QILVQGNKANKIDIIGNPSKDGLLDLFWSATGDPVLLRKGRLQGLIEVRDKVIREKIDQV CCEEECCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH DALSINVMDAVNEIHKDGFGINGNTNQSFFNIRSLSINTFGEYDSNGDGQNDVTAIFRVT HHEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEE GRNTVDPDRPIGINGTITFHQSDAKESPILIPYSSNDTLNGIIKKINASRSGVVAYMNHD CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEECC NQLALKATVADDHPNKNFILRHIEDSGDLLVGMTGILMASGPSGAYDYRRLGEINKLQVR CEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHCCCCEEEEE SEDVTLTPHFHPASHFRVADSIANNVSNIAAARGKDVGGTGDYNSPGGHKDGRNALMVAS CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH ALRNSPVMVDYSKTTDDFYNTLISKLGTEAREAKQEFGIQNDLMTELENMRQSVMGVNLD HHCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH EEMANMVQFQHAYNASAKMINTMNEILDTIINRLGV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GSTFSGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANL CCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCC PGQIGQGVEIASIERIRDNFIDDRIIETSGNKDYWAARNEYLYQLETVFNEPNGTTLRTL CCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH MDKFWSSWEDLANYPEDNAHRSVVLEKANGLGSRTEDVYRKLAQLRDQANREIETKTYHL HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEH NTIAENIRTLNERIGKSEALGDRPNDLYDKRDALLQELSSLVDVTIGRSDEDELMVFIGQ HHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC QILVQGNKANKIDIIGNPSKDGLLDLFWSATGDPVLLRKGRLQGLIEVRDKVIREKIDQV CCEEECCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH DALSINVMDAVNEIHKDGFGINGNTNQSFFNIRSLSINTFGEYDSNGDGQNDVTAIFRVT HHEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEE GRNTVDPDRPIGINGTITFHQSDAKESPILIPYSSNDTLNGIIKKINASRSGVVAYMNHD CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEECC NQLALKATVADDHPNKNFILRHIEDSGDLLVGMTGILMASGPSGAYDYRRLGEINKLQVR CEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHCCCCEEEEE SEDVTLTPHFHPASHFRVADSIANNVSNIAAARGKDVGGTGDYNSPGGHKDGRNALMVAS CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH ALRNSPVMVDYSKTTDDFYNTLISKLGTEAREAKQEFGIQNDLMTELENMRQSVMGVNLD HHCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH EEMANMVQFQHAYNASAKMINTMNEILDTIINRLGV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]