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The map label for this gene is ohrR [H]

Identifier: 45659258

GI number: 45659258

Start: 4218355

End: 4218801

Strand: Reverse

Name: ohrR [H]

Synonym: LIC13441

Alternate gene names: 45659258

Gene position: 4218801-4218355 (Counterclockwise)

Preceding gene: 45659259

Following gene: 45659253

Centisome position: 98.63

GC content: 32.66

Gene sequence:

>447_bases
ATGGGAAAGACCGCAAAAGATCTTTTTTTAGAAAATCAGGTTTGTTTTCCACTCTATGCCTGTTCAAGAGCTCTGACCGC
GATTTATCGTCCTATATTGGAAGAATTAGGTATTACTTATCCACAATATTTAGTTTTACTCATACTTTGGAAAGAAGATG
GTTGTAGCGTAAAAGAAATTGGAAAAAAATTATATCTAGATTCTGGAACTTTGACACCTCTACTTAAACGTTTAGAAGAT
TCAGAATTTGTAATACGAAAACGTTCCATAGAAGATGAACGTTCCGTAGAAATTTACCTTTCTGCAAAAGGAAAAAAACT
TAGAGATAAGGCTGTTTGTGTTCCTTCAAAACTGATTGAAAGTTTGGAAATAGATAAGAAAAGTCTTATCGATCTTAAAA
AAGATTTGGATCGATTGCTCCTAACACTTTCTGAAAAAGTGGAATAA

Upstream 100 bases:

>100_bases
ACGTAATAAAACGTTACTCCCCCATTACAACTCCAGAAAACATCGAGAAAGAAATCCAAAATCTTTTAAAACGGTAAAAA
TAAAACCAACTTCTTTAAAA

Downstream 100 bases:

>100_bases
ATTTTGTATCTGTTGCAAGTTTTATAGAAACGAATGGAGAATTAATTTTTCAACAACTCTATTTAACGTGAGCTTGGCGA
AAGGAATTCATGATTTATTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MGKTAKDLFLENQVCFPLYACSRALTAIYRPILEELGITYPQYLVLLILWKEDGCSVKEIGKKLYLDSGTLTPLLKRLED
SEFVIRKRSIEDERSVEIYLSAKGKKLRDKAVCVPSKLIESLEIDKKSLIDLKKDLDRLLLTLSEKVE

Sequences:

>Translated_148_residues
MGKTAKDLFLENQVCFPLYACSRALTAIYRPILEELGITYPQYLVLLILWKEDGCSVKEIGKKLYLDSGTLTPLLKRLED
SEFVIRKRSIEDERSVEIYLSAKGKKLRDKAVCVPSKLIESLEIDKKSLIDLKKDLDRLLLTLSEKVE
>Mature_147_residues
GKTAKDLFLENQVCFPLYACSRALTAIYRPILEELGITYPQYLVLLILWKEDGCSVKEIGKKLYLDSGTLTPLLKRLEDS
EFVIRKRSIEDERSVEIYLSAKGKKLRDKAVCVPSKLIESLEIDKKSLIDLKKDLDRLLLTLSEKVE

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16966; Mature: 16835

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTAKDLFLENQVCFPLYACSRALTAIYRPILEELGITYPQYLVLLILWKEDGCSVKEI
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHH
GKKLYLDSGTLTPLLKRLEDSEFVIRKRSIEDERSVEIYLSAKGKKLRDKAVCVPSKLIE
HHHHCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHH
SLEIDKKSLIDLKKDLDRLLLTLSEKVE
HHCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKTAKDLFLENQVCFPLYACSRALTAIYRPILEELGITYPQYLVLLILWKEDGCSVKEI
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHH
GKKLYLDSGTLTPLLKRLEDSEFVIRKRSIEDERSVEIYLSAKGKKLRDKAVCVPSKLIE
HHHHCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHH
SLEIDKKSLIDLKKDLDRLLLTLSEKVE
HHCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]