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The map label for this gene is 45659246

Identifier: 45659246

GI number: 45659246

Start: 4205723

End: 4206652

Strand: Reverse

Name: 45659246

Synonym: LIC13429

Alternate gene names: NA

Gene position: 4206652-4205723 (Counterclockwise)

Preceding gene: 45659253

Following gene: 45659245

Centisome position: 98.35

GC content: 28.71

Gene sequence:

>930_bases
GTGAACATCTTAAAAATTCTTACCGTATTCTCGTTGTTTGTCGGAAACTCTCTTTGGGGAACCAATTTACCTTTTTATTG
GAATTACGTTTTAATTACATCCATTAAGAAACAATCATCATCTTATTGGTCTGATATTTTTTCAAAATCACACACAATCT
GTTACACGGGAGCCGTCATTTTATCAAATGGTTATTTTAAGTTTTCATTACTTCCTAAGAATTTTATCAAATTAAGTAAA
AATTATAAAATCAGACTAATTCCTTTGATTACTACCGTTTCTAAAAATGATTCTAGTTTTTTAAGTTCGGATGTTACGAT
GAAAATTGCGATTGAAAACTTAATCAATTTTTTAAAACAAAATCCTGAAATTGCAGGACTACATTTTGATATAGAATTTC
TTCCTAAGTCTGAGATTGGGAATTATAAAAAATTTTTAAGAAAGTTAAAACAAGAACTTCCTAAAGAAAAAGTTCTTACT
GTTGCTATATTTCCTCAATTAGAATTTCCTAATCAAAATTTCATCATTCATTCTGAGCTTATCGAAGAAAAATCTATTGA
TGAATTTGTTTTGATGAGTTATGATTTTCATTCTCCAAAAACTAATCCTGGGCCTGTTACTTCTATCCCATTGACAAAAA
AGAATTTAGAGTTTTTATTAAAACGAACTTCTAATTCAAAACTTTGGCTTGGGCTTCCTCTCTACGGATATTTTTGGAAT
CGCAATGGTAGAGTTCAAATTCTGACACAAAAAGATCTGAAAAAATTTAGGGAAAGTTCGGAAATTATCTTAAATGAAGA
CGGTTTTTTCTTTGTTAAAAATAGTAAAGGGGAAGGTTATATTTCGGATTTAAATACTTTAGAAAAGTATAATGTACTTA
TTAATACGTTTCAACTCAAAGGAACTGCTTTTTGGAGAGTAGGATTTTAG

Upstream 100 bases:

>100_bases
CCCGGATATTCCGGTACTTTTTTGTTTGAATAAAAAATCGGTCTGAAAGGTTCCCAGATTGATTGAAAATTTATAAATCG
ATTTTTATAATTCGTAAGAC

Downstream 100 bases:

>100_bases
ACTTAAATGAAACTGGGTTTATTGTTTTAGATTTTATTTCAATCCAATTTAAAAATGGATGAGTTTGTCGGAACAATTGA
TTTCGTTTTCAGGGTTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Family; Glycoside Hydrolase Family Protein; Spore Peptidoglycan Hydrolase; Chitinase; Glycosyl Hydrolase-Like Protein; Glycosyl Hydrolase Family

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNILKILTVFSLFVGNSLWGTNLPFYWNYVLITSIKKQSSSYWSDIFSKSHTICYTGAVILSNGYFKFSLLPKNFIKLSK
NYKIRLIPLITTVSKNDSSFLSSDVTMKIAIENLINFLKQNPEIAGLHFDIEFLPKSEIGNYKKFLRKLKQELPKEKVLT
VAIFPQLEFPNQNFIIHSELIEEKSIDEFVLMSYDFHSPKTNPGPVTSIPLTKKNLEFLLKRTSNSKLWLGLPLYGYFWN
RNGRVQILTQKDLKKFRESSEIILNEDGFFFVKNSKGEGYISDLNTLEKYNVLINTFQLKGTAFWRVGF

Sequences:

>Translated_309_residues
MNILKILTVFSLFVGNSLWGTNLPFYWNYVLITSIKKQSSSYWSDIFSKSHTICYTGAVILSNGYFKFSLLPKNFIKLSK
NYKIRLIPLITTVSKNDSSFLSSDVTMKIAIENLINFLKQNPEIAGLHFDIEFLPKSEIGNYKKFLRKLKQELPKEKVLT
VAIFPQLEFPNQNFIIHSELIEEKSIDEFVLMSYDFHSPKTNPGPVTSIPLTKKNLEFLLKRTSNSKLWLGLPLYGYFWN
RNGRVQILTQKDLKKFRESSEIILNEDGFFFVKNSKGEGYISDLNTLEKYNVLINTFQLKGTAFWRVGF
>Mature_309_residues
MNILKILTVFSLFVGNSLWGTNLPFYWNYVLITSIKKQSSSYWSDIFSKSHTICYTGAVILSNGYFKFSLLPKNFIKLSK
NYKIRLIPLITTVSKNDSSFLSSDVTMKIAIENLINFLKQNPEIAGLHFDIEFLPKSEIGNYKKFLRKLKQELPKEKVLT
VAIFPQLEFPNQNFIIHSELIEEKSIDEFVLMSYDFHSPKTNPGPVTSIPLTKKNLEFLLKRTSNSKLWLGLPLYGYFWN
RNGRVQILTQKDLKKFRESSEIILNEDGFFFVKNSKGEGYISDLNTLEKYNVLINTFQLKGTAFWRVGF

Specific function: Unknown

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35842; Mature: 35842

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILKILTVFSLFVGNSLWGTNLPFYWNYVLITSIKKQSSSYWSDIFSKSHTICYTGAVI
CHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHCCCCEEEEEEEEE
LSNGYFKFSLLPKNFIKLSKNYKIRLIPLITTVSKNDSSFLSSDVTMKIAIENLINFLKQ
EECCEEEEEECCHHHHHHCCCCEEEEEEEEEEECCCCCHHHCCCCEEEEEHHHHHHHHHC
NPEIAGLHFDIEFLPKSEIGNYKKFLRKLKQELPKEKVLTVAIFPQLEFPNQNFIIHSEL
CCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHEEEEEEEEEEECCCCCEEEEHHH
IEEKSIDEFVLMSYDFHSPKTNPGPVTSIPLTKKNLEFLLKRTSNSKLWLGLPLYGYFWN
HHHCCCCCEEEEEEECCCCCCCCCCEEECCCCHHHHHHHEEECCCCEEEEECEEEEEEEC
RNGRVQILTQKDLKKFRESSEIILNEDGFFFVKNSKGEGYISDLNTLEKYNVLINTFQLK
CCCEEEEEEHHHHHHHHCCCCEEEECCCEEEEECCCCCEEHHHHHHHHHHEEEEEEEEEC
GTAFWRVGF
CEEEEEECC
>Mature Secondary Structure
MNILKILTVFSLFVGNSLWGTNLPFYWNYVLITSIKKQSSSYWSDIFSKSHTICYTGAVI
CHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHCCCCEEEEEEEEE
LSNGYFKFSLLPKNFIKLSKNYKIRLIPLITTVSKNDSSFLSSDVTMKIAIENLINFLKQ
EECCEEEEEECCHHHHHHCCCCEEEEEEEEEEECCCCCHHHCCCCEEEEEHHHHHHHHHC
NPEIAGLHFDIEFLPKSEIGNYKKFLRKLKQELPKEKVLTVAIFPQLEFPNQNFIIHSEL
CCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHEEEEEEEEEEECCCCCEEEEHHH
IEEKSIDEFVLMSYDFHSPKTNPGPVTSIPLTKKNLEFLLKRTSNSKLWLGLPLYGYFWN
HHHCCCCCEEEEEEECCCCCCCCCCEEECCCCHHHHHHHEEECCCCEEEEECEEEEEEEC
RNGRVQILTQKDLKKFRESSEIILNEDGFFFVKNSKGEGYISDLNTLEKYNVLINTFQLK
CCCEEEEEEHHHHHHHHCCCCEEEECCCEEEEECCCCCEEHHHHHHHHHHEEEEEEEEEC
GTAFWRVGF
CEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA