Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45659159
Identifier: 45659159
GI number: 45659159
Start: 4096331
End: 4096864
Strand: Reverse
Name: 45659159
Synonym: LIC13340
Alternate gene names: NA
Gene position: 4096864-4096331 (Counterclockwise)
Preceding gene: 45659160
Following gene: 45659158
Centisome position: 95.78
GC content: 33.9
Gene sequence:
>534_bases ATGGTGGAATATTTTTTTGAAAAAATTTATAACTTAGAAGGAAGAGAAGTTTGGCTTCATCTTGCGATGGACACATACCA AAAGGTGAAAGGTATGTTGAAAGAAACTTCACGGGAAAACATAGAATACTTGATCGAACTCAATAATCTTACTGAGGAAA TGGATACTATTTTCGCCAAACATCTCGTAGACGGAGATTGGGATGGTAAAAGACTTAGTAGAGAAGAATACGATTTTTAT TACAGTCAGATGGGTCATTATGAAGAACGAATGAGACAATTGGAAATCGTTTTAAGAAATTTGAAAGTTTTTTACGAATT GGCTCATAAACCTATCAGCGCTTACTTGATCAAACCAGCGAAGTTTATGGCTTCTTTGTTAGGCGTCTCTACTTTATTTC AAAGTGTGGAAGAAGCGTATAACGCAACTCTTCCGGTTTCTTCTAATATATTCAATTCTTTTTATGAAGAAGTAAAAAAA AGGGAAACGGAATATATTCAAACTTTACTTGGAGAAAGTAGAAAAGAAGCATGA
Upstream 100 bases:
>100_bases TAAAAAACTAAAAGCTGCAAGAGCGGAAGTCGTTCGGGCTCAAGTAGAACGGTTCCGTGTTTTTTACGCGAGTTATTTTC ATTTGGAAGAAACGATTCCG
Downstream 100 bases:
>100_bases GTCGACTTCGCAGACAACTTTTGGAGAAAGGGCATCGTAAGGAAGAGTCACATGAAAACAGAGAGCGTTGGCTTTTGACT TACGCTGATATGATCACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MVEYFFEKIYNLEGREVWLHLAMDTYQKVKGMLKETSRENIEYLIELNNLTEEMDTIFAKHLVDGDWDGKRLSREEYDFY YSQMGHYEERMRQLEIVLRNLKVFYELAHKPISAYLIKPAKFMASLLGVSTLFQSVEEAYNATLPVSSNIFNSFYEEVKK RETEYIQTLLGESRKEA
Sequences:
>Translated_177_residues MVEYFFEKIYNLEGREVWLHLAMDTYQKVKGMLKETSRENIEYLIELNNLTEEMDTIFAKHLVDGDWDGKRLSREEYDFY YSQMGHYEERMRQLEIVLRNLKVFYELAHKPISAYLIKPAKFMASLLGVSTLFQSVEEAYNATLPVSSNIFNSFYEEVKK RETEYIQTLLGESRKEA >Mature_177_residues MVEYFFEKIYNLEGREVWLHLAMDTYQKVKGMLKETSRENIEYLIELNNLTEEMDTIFAKHLVDGDWDGKRLSREEYDFY YSQMGHYEERMRQLEIVLRNLKVFYELAHKPISAYLIKPAKFMASLLGVSTLFQSVEEAYNATLPVSSNIFNSFYEEVKK RETEYIQTLLGESRKEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21088; Mature: 21088
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEYFFEKIYNLEGREVWLHLAMDTYQKVKGMLKETSRENIEYLIELNNLTEEMDTIFAK CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLVDGDWDGKRLSREEYDFYYSQMGHYEERMRQLEIVLRNLKVFYELAHKPISAYLIKPA HHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KFMASLLGVSTLFQSVEEAYNATLPVSSNIFNSFYEEVKKRETEYIQTLLGESRKEA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVEYFFEKIYNLEGREVWLHLAMDTYQKVKGMLKETSRENIEYLIELNNLTEEMDTIFAK CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLVDGDWDGKRLSREEYDFYYSQMGHYEERMRQLEIVLRNLKVFYELAHKPISAYLIKPA HHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KFMASLLGVSTLFQSVEEAYNATLPVSSNIFNSFYEEVKKRETEYIQTLLGESRKEA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA