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The map label for this gene is 45659134

Identifier: 45659134

GI number: 45659134

Start: 4063658

End: 4064386

Strand: Reverse

Name: 45659134

Synonym: LIC13315

Alternate gene names: NA

Gene position: 4064386-4063658 (Counterclockwise)

Preceding gene: 45659135

Following gene: 45659133

Centisome position: 95.02

GC content: 34.57

Gene sequence:

>729_bases
ATGTTTCAAAATATTAAATGGATTTTTTTCAAAGAAGTAAAAGTATTTTTCGGAACCTTTATGGCTCCTTTAGTTTTCGG
CGGGACCGCTTTTTTAAATTCGCTTTTTGTATTAATTCTGAATTTTAATTCGGGTACAAACTACGTTGATACAACGGTCA
TTACGTTTCTTTCCTTTATGTCGACGATCATCATTTCTATGTTGATTCTTGCTATGGGAAGTATCACGGAAGAAAGAAAC
CGAGGCACACTTGAGTTTCTGTTTACGGCTCCGATTACCGATTTGGAAATTGTAGCAGGTAAGTTCGCGTTCGGAACTTT
GATTTGTTTTTTAATTTCTGTTTTTGTAAACGGATTGTTTCCGATTTTTCTTTATTCTTTTTGGAAAGCTCCGCTTTATA
TAGTGGCTTCGGGAACGATAGGAGTTTTTCTTTTAGGAATTTTTTCTTTTGCGGTTGGACTTTTTGGAAGTAGTCTCGGT
AAAAATCAAATGATCTCTTTATTGATTTCCATTGTGATCATTTTAACCCTTTGGGTTTCGGGATATTTTTCGTATCTATT
CGATTCGGTGACTAGAAAAATTCTTTATCACCTTCATATATTTTCGCATTTTATTGCGTTTTGTAAAGGAGTTCTACCTT
TGAATGGAATCGTATTCTTTGTAAGCGGTGCGTTATTCTTTCTTTATCTGACCGTAAAAGTTTTAGAATCTAGGAGATGG
AGAGGATGA

Upstream 100 bases:

>100_bases
GAAAAACTTTTCGCATCCGCTTCTTCTTCTCCTCGTTTGGAATACATTCGTAAACAAGAAGTTACCTTAGAACAGATTTT
TATGAATCAGGTTTAAAGTT

Downstream 100 bases:

>100_bases
AAACCATATTGTTAAGAATTTTTCCTTGGGTTTCACTCGCTTCTTTATTTCTCTATTTTCCGGTTAGAGATAGCATACAA
TTACCCACCAATCGTTGGCT

Product: ABC transporter permease protein

Products: NA

Alternate protein names: ABC Transporter Permease; ABC-2 Type Transporter Superfamily Protein; ABC-2 Type Transport System Permease Protein; Membrane Spanning Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MFQNIKWIFFKEVKVFFGTFMAPLVFGGTAFLNSLFVLILNFNSGTNYVDTTVITFLSFMSTIIISMLILAMGSITEERN
RGTLEFLFTAPITDLEIVAGKFAFGTLICFLISVFVNGLFPIFLYSFWKAPLYIVASGTIGVFLLGIFSFAVGLFGSSLG
KNQMISLLISIVIILTLWVSGYFSYLFDSVTRKILYHLHIFSHFIAFCKGVLPLNGIVFFVSGALFFLYLTVKVLESRRW
RG

Sequences:

>Translated_242_residues
MFQNIKWIFFKEVKVFFGTFMAPLVFGGTAFLNSLFVLILNFNSGTNYVDTTVITFLSFMSTIIISMLILAMGSITEERN
RGTLEFLFTAPITDLEIVAGKFAFGTLICFLISVFVNGLFPIFLYSFWKAPLYIVASGTIGVFLLGIFSFAVGLFGSSLG
KNQMISLLISIVIILTLWVSGYFSYLFDSVTRKILYHLHIFSHFIAFCKGVLPLNGIVFFVSGALFFLYLTVKVLESRRW
RG
>Mature_242_residues
MFQNIKWIFFKEVKVFFGTFMAPLVFGGTAFLNSLFVLILNFNSGTNYVDTTVITFLSFMSTIIISMLILAMGSITEERN
RGTLEFLFTAPITDLEIVAGKFAFGTLICFLISVFVNGLFPIFLYSFWKAPLYIVASGTIGVFLLGIFSFAVGLFGSSLG
KNQMISLLISIVIILTLWVSGYFSYLFDSVTRKILYHLHIFSHFIAFCKGVLPLNGIVFFVSGALFFLYLTVKVLESRRW
RG

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27235; Mature: 27235

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQNIKWIFFKEVKVFFGTFMAPLVFGGTAFLNSLFVLILNFNSGTNYVDTTVITFLSFM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHH
STIIISMLILAMGSITEERNRGTLEFLFTAPITDLEIVAGKFAFGTLICFLISVFVNGLF
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIFLYSFWKAPLYIVASGTIGVFLLGIFSFAVGLFGSSLGKNQMISLLISIVIILTLWVS
HHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GYFSYLFDSVTRKILYHLHIFSHFIAFCKGVLPLNGIVFFVSGALFFLYLTVKVLESRRW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RG
CC
>Mature Secondary Structure
MFQNIKWIFFKEVKVFFGTFMAPLVFGGTAFLNSLFVLILNFNSGTNYVDTTVITFLSFM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHH
STIIISMLILAMGSITEERNRGTLEFLFTAPITDLEIVAGKFAFGTLICFLISVFVNGLF
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIFLYSFWKAPLYIVASGTIGVFLLGIFSFAVGLFGSSLGKNQMISLLISIVIILTLWVS
HHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GYFSYLFDSVTRKILYHLHIFSHFIAFCKGVLPLNGIVFFVSGALFFLYLTVKVLESRRW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA