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The map label for this gene is 45657890

Identifier: 45657890

GI number: 45657890

Start: 2461194

End: 2462456

Strand: Reverse

Name: 45657890

Synonym: LIC12041

Alternate gene names: NA

Gene position: 2462456-2461194 (Counterclockwise)

Preceding gene: 45657891

Following gene: 45657889

Centisome position: 57.57

GC content: 30.88

Gene sequence:

>1263_bases
ATGAAAGTAGCCTTCTTACTTGGAGCAGGATTCTCATATGATTTGGGAATGCCATTAGGAATTGATTTAACGAATTACTT
TCTTAATCTATTTTCAGGAATCGATGAGTCACAATTAATTGAAGTATTATTATCTCTTGAAGAAGAGGTTCCATTTAGTA
AGAGGGCAATTTCTAAAGGAATAAAGCTTCTTTATCATCATAAAAAAAGAAAAGTAAAAAATTATGAATACCTTTTGGCT
CAAATTGAAGAATTGGCATCAATTTCAAAAGAGGGTGGAGTTATTAAAACTTCTTATCGTTATTTACTAAATCTATTTTA
TGGAACGATTTATTCAAATTTAATGCTTTATCAAAATATTTCATACAATCAGATTTATAAAACCAATTTTGATTTGTACG
CAGGCTTGAAACACGTGCTTAATGAAAATGAAACCTGGTTCTTTACGCTAAATCACGATATTTATCTTGAACTATTGTGC
ATAGATTACGACATACCTGCTACCTATGGGGATACGGAAGTCATTAAGTTTCCGATAGATAACAATTGCATGACCGATAA
AATAAATTTTACTTGCAAAAAAAGAAAAGAATTCAATATCAAAAACAAAGCATATTTTAAAAACAAGTTTGGAGCTAATA
TTGTAAAACTTCATGGAGGTCTTGGCGAGCTTGATTATAGTAAAAGACACATGGTATGCAATTTTCCACTTACTTTCAGT
AGCTCCATCGATCTTATTAATCAATTTAATAAAATTCATAAGATGGCTTTCTTCTTTGATGAGGATAGCAAGATTAAACT
ACCGAATAACCGTCGTCATATATTTGTTGCAGATGAAGATGATGATCTTGTAGTTTTGACGAAGTCTGTTTTAATCGGAG
GGAATAAATACAGTAAAACGGCAAAAATAAAGCAAGGTGAGGAGAAACTAAAGCTATTTGAGGATGTCATGAAAAGCGTC
GATAAACTAATTATTATTGGTTATGGTTTTGGAGATCAGCACATCAATTTTCGGATCAATCATCAATTGGTGAAAAATGA
AAAATTTACAATTGAAATTGTTGATCCAAATTTTAAAAAAGTGCCAAGCTTTGTAGAGCAATTCGACTATGATAATAGAA
TAAAGGGGACTGCATTAAATACAACTGATTGGATTAATCAATTTTATCGAGGTAATAAACGTAACCGATCACCAAATATG
AAGAAGATATATTCCCAACGAGAAAAGATAAGATCTACTGTTCGCAAGAGTTACTTTAAGTGA

Upstream 100 bases:

>100_bases
CTCGTGTCAACCGCATCGCGCTAATGCGCTTGCGGCCGCAACGTCGAGGAGACTCTTTCGTTAAGCGAAATACTCCAAAG
TTGATTTTATACATTATTCA

Downstream 100 bases:

>100_bases
AGTAGTAACATAAAAGTGGATAGTCTTATGAACAATCCTGAAGAATCTCAAAAAGTAATTGAAACATTTATGCAAATGAC
TAAATTTGACATTCAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKVAFLLGAGFSYDLGMPLGIDLTNYFLNLFSGIDESQLIEVLLSLEEEVPFSKRAISKGIKLLYHHKKRKVKNYEYLLA
QIEELASISKEGGVIKTSYRYLLNLFYGTIYSNLMLYQNISYNQIYKTNFDLYAGLKHVLNENETWFFTLNHDIYLELLC
IDYDIPATYGDTEVIKFPIDNNCMTDKINFTCKKRKEFNIKNKAYFKNKFGANIVKLHGGLGELDYSKRHMVCNFPLTFS
SSIDLINQFNKIHKMAFFFDEDSKIKLPNNRRHIFVADEDDDLVVLTKSVLIGGNKYSKTAKIKQGEEKLKLFEDVMKSV
DKLIIIGYGFGDQHINFRINHQLVKNEKFTIEIVDPNFKKVPSFVEQFDYDNRIKGTALNTTDWINQFYRGNKRNRSPNM
KKIYSQREKIRSTVRKSYFK

Sequences:

>Translated_420_residues
MKVAFLLGAGFSYDLGMPLGIDLTNYFLNLFSGIDESQLIEVLLSLEEEVPFSKRAISKGIKLLYHHKKRKVKNYEYLLA
QIEELASISKEGGVIKTSYRYLLNLFYGTIYSNLMLYQNISYNQIYKTNFDLYAGLKHVLNENETWFFTLNHDIYLELLC
IDYDIPATYGDTEVIKFPIDNNCMTDKINFTCKKRKEFNIKNKAYFKNKFGANIVKLHGGLGELDYSKRHMVCNFPLTFS
SSIDLINQFNKIHKMAFFFDEDSKIKLPNNRRHIFVADEDDDLVVLTKSVLIGGNKYSKTAKIKQGEEKLKLFEDVMKSV
DKLIIIGYGFGDQHINFRINHQLVKNEKFTIEIVDPNFKKVPSFVEQFDYDNRIKGTALNTTDWINQFYRGNKRNRSPNM
KKIYSQREKIRSTVRKSYFK
>Mature_420_residues
MKVAFLLGAGFSYDLGMPLGIDLTNYFLNLFSGIDESQLIEVLLSLEEEVPFSKRAISKGIKLLYHHKKRKVKNYEYLLA
QIEELASISKEGGVIKTSYRYLLNLFYGTIYSNLMLYQNISYNQIYKTNFDLYAGLKHVLNENETWFFTLNHDIYLELLC
IDYDIPATYGDTEVIKFPIDNNCMTDKINFTCKKRKEFNIKNKAYFKNKFGANIVKLHGGLGELDYSKRHMVCNFPLTFS
SSIDLINQFNKIHKMAFFFDEDSKIKLPNNRRHIFVADEDDDLVVLTKSVLIGGNKYSKTAKIKQGEEKLKLFEDVMKSV
DKLIIIGYGFGDQHINFRINHQLVKNEKFTIEIVDPNFKKVPSFVEQFDYDNRIKGTALNTTDWINQFYRGNKRNRSPNM
KKIYSQREKIRSTVRKSYFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49130; Mature: 49130

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAFLLGAGFSYDLGMPLGIDLTNYFLNLFSGIDESQLIEVLLSLEEEVPFSKRAISKG
CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHH
IKLLYHHKKRKVKNYEYLLAQIEELASISKEGGVIKTSYRYLLNLFYGTIYSNLMLYQNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHEEECC
SYNQIYKTNFDLYAGLKHVLNENETWFFTLNHDIYLELLCIDYDIPATYGDTEVIKFPID
CCCEEEECCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCEEEEECCC
NNCMTDKINFTCKKRKEFNIKNKAYFKNKFGANIVKLHGGLGELDYSKRHMVCNFPLTFS
CCCEECCCCEEEECCCCCCCCCHHEEHHCCCCEEEEEECCCCCCCCCCCEEEEECCEECC
SSIDLINQFNKIHKMAFFFDEDSKIKLPNNRRHIFVADEDDDLVVLTKSVLIGGNKYSKT
CCHHHHHHHHHHHHEEEEECCCCEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCC
AKIKQGEEKLKLFEDVMKSVDKLIIIGYGFGDQHINFRINHQLVKNEKFTIEIVDPNFKK
CHHHCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCHHH
VPSFVEQFDYDNRIKGTALNTTDWINQFYRGNKRNRSPNMKKIYSQREKIRSTVRKSYFK
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVAFLLGAGFSYDLGMPLGIDLTNYFLNLFSGIDESQLIEVLLSLEEEVPFSKRAISKG
CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHH
IKLLYHHKKRKVKNYEYLLAQIEELASISKEGGVIKTSYRYLLNLFYGTIYSNLMLYQNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHEEECC
SYNQIYKTNFDLYAGLKHVLNENETWFFTLNHDIYLELLCIDYDIPATYGDTEVIKFPID
CCCEEEECCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCEEEEECCC
NNCMTDKINFTCKKRKEFNIKNKAYFKNKFGANIVKLHGGLGELDYSKRHMVCNFPLTFS
CCCEECCCCEEEECCCCCCCCCHHEEHHCCCCEEEEEECCCCCCCCCCCEEEEECCEECC
SSIDLINQFNKIHKMAFFFDEDSKIKLPNNRRHIFVADEDDDLVVLTKSVLIGGNKYSKT
CCHHHHHHHHHHHHEEEEECCCCEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCC
AKIKQGEEKLKLFEDVMKSVDKLIIIGYGFGDQHINFRINHQLVKNEKFTIEIVDPNFKK
CHHHCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCHHH
VPSFVEQFDYDNRIKGTALNTTDWINQFYRGNKRNRSPNMKKIYSQREKIRSTVRKSYFK
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA