Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is secA
Identifier: 45657803
GI number: 45657803
Start: 2352392
End: 2355124
Strand: Reverse
Name: secA
Synonym: LIC11944
Alternate gene names: 45657803
Gene position: 2355124-2352392 (Counterclockwise)
Preceding gene: 45657804
Following gene: 45657802
Centisome position: 55.06
GC content: 38.49
Gene sequence:
>2733_bases ATGAATATGATTCAAAACATTCTCCGGGTGGTTTTCGGAAGTAAATTTGAGAGAGATTTAAAAAAACTCATCCCAATCGT TAGACAAATTAATTCTTTAGAGGAAAGTATAAAGGGAATGGACGATTCCACTCTTTCTTCTCAAACGAAAAAGTTTAAAG AAAGAATTGTACAAGGAGAATCCTTAGATTCAATTCTTCCAGAGGCATTTGCCACAGTAAGAGAAGTTTCTCTTCGTACA ATGGGGATGAGACATTTTGACGTGCAGATGATGGGCGGAATCGCTCTGCATGGTGGAAACATCTCCGAAATGAAAACTGG AGAAGGAAAAACTCTTACCTCTACTCTTGCAGTTTATCTCAATTCTCTTGCGGGAAATGGTGTACACGTTGTTACAGTAA ACGATTACCTTGCCAAAAGAGACGCGAATTGGATGAAACCAATTTATGACTTTTTAGGGATTTCAGTCGGTGTAATTCAA CACGATATGGATCATGAACAAAGAAAGGTGGCTTACGCCGCAGACATCACCTATGGAACCAACAACGAATTCGGTTTTGA TTATTTAAGAGACAATATGGTTTCTCATAAGGATCATAAGGTTCAGAGATCTCATTTTTTTGCGATCGTAGACGAGGTGG ATTCAATTTTAATTGATGAGGCAAGAACTCCTTTGATCATTTCCGGTCCTTCCGACGAAGCGACTGATAAATACGTTCGT GTCAATAAAATCATTCCTAAACTCTCAGAAGGTGAAGATTTCGAAGTAGATGAAAAGGCGCGTAACGTTCTTTTGACTGA AAAAGGTGTTTCTCACGTTGAAGAAATACTTTCGATCGAAAATTTATACGCTCCTGAGAACGTCGATCTAGTTCATCACG TTCACCAGGCTTTGAAGGCACATAAAATTTTTAGAGTGGATAAGGACTACGTGGTTCAACAAGGTCAAGTAGTAATTATA GATGAATTTACCGGTCGCCCTATGGAAGGAAGGAGATATTCCGACGGACTTCATCAAGCGATTGAGGCCAAAGAAAACGT TACAATCGCAAAAGAATCTCAAACTCTCGCTTCTATCACATTCCAAAATTATTTTAGAATGTACGATAAGCTTGCCGGAA TGACTGGAACCGCGGACACCGAAGCGGAGGAATTTAAAAAAATCTACAACTTAGACGTGATTGTAATTCCGCCTAACGTA TCTGTTCAAAGAAAGGATTCTCCAGATCGTGTGTATCGTACTGAAAAAGAAAAGTTCCAAGCAATTTTAACTGAAATTCG AGAGCTACAATCTAAAAAACAGCCGGTTCTTGTAGGAACTATTTCCATTGAAAAGTCGGAGGTTCTTTCTAAAATGTTAG CTTCGGCTGGAATCCAGCATAACGTATTAAACGCTAAGTTTCATCAAAAAGAAGCCGAAATCGTTGCAAATGCTGGCAAA CCTGGCGCCGTTACGATTGCCACCAATATGGCGGGAAGAGGAACCGACATCGTTTTAGGAGGAGCTCAGCTTTATAAAGA GAATCTAGAAACTTGGAAAGATGAAGACGAAATTGTAAAACAGTTTAAAGAATCCATTTTAAGACAAAATCTTGAATATG CAGAATCTCTAATGCAAAAAATGGATTCTGGAACCAAACAAAAACGTGCGTCTGAAATTCTAAGTTCCGTAAAAATTTGG AAAAAAAATCACGAGGAAGTTTTGGCTGCAGGAGGGCTTCATATCTTAGGAACGGAAAGACACGAGGCGAGACGGATTGA TAACCAGCTTAGAGGTCGTTCTGGTCGTCAAGGTGATCCTGGTTCGAGTCGATTCTATTTGTCCCTTCAAGACGATCTTA TGAGAATTTTTGGTTCAGACCGAATTTCCGGGCTTATGAAATGGGCCAATATGCCGGAAGGTCAAGAGATCGAAAGTAAA ATGGTGAGTAACGCGATTGCAAGAGCGCAAAAGCGAGTGGAAGGTCATAACTTTGATATTCGTAAACACCTTCTTGAATA CGACGACGTGATGAATCGTCAACGAATCGTAATTTATAAAATGAGAAACGAGGTGCTTGAAAACGAAGATATTTCTCCTT TAATTTCAGGTTTTATCGAAGAGACTGTAGAAAATCAAATCGTAACTCACTGCGAGGGAAATAATCCGTCTGCTTGGAAT TTAGAATCATTGAAAGAATGGTCCGATGGCTTAGATTTGAACCTACAGATTGACGAAGTAGAATTTAAAAAATCTAAAAA CCCACAACTATCTCTTTTTGAAAAAGTAAGTTCTACTGCAAAGTTGAAATACGAATCCAAAGCAGAAAAGATTGGCAAAG ATATTTGGAAGTTACTCGAAAGAAATATATTCTTGGATATTTTAGATCATCGTTGGAAAGAACATCTTTATTCCATGGAT CATTTAAGAGAAGGAATCTGGACCGTAGGTTATAGTGAAAGAAATCCTCTTGTAGAATATAAACTTCAAGGTTTTAGAAT GTTCGACACTGCGATCGAAAATTTAAAAAACGAAATTGTAAACTTCATCTTTCGAGTGGAAGTATCAGAAAATTCTAAAC TACCGGAAGAAAAAAAAGAATATAAAAAAGTAGGGCAAGAAATTACCGGAGGATTTCAAGAATTTTCAGGTGGCAATTTA AATCGTTCTCAGTCCAACGGTTCCAGTGTAACGGTTACTACCAGCTCTGGTGGGGGAACCGAAAGAAAGACAAGCCGGAG AAGAAAACGCTGA
Upstream 100 bases:
>100_bases ATTTAAAGAAGAAATCTTGTTATCCTAAGAGTTAAAATATTTTTGGAATCGGCACGATTGTCTTAAAAGTAATAATTCAA ACAATAGAATATACGGAAAA
Downstream 100 bases:
>100_bases GGTTTTCTGTCTTCATTTCGATTTTGTCCTGCGTTCTATTTTATTGTGTAACAACAGAACCTCAAAAAGGAACCGCAAAA CAAATCTATTCGGATTGTAT
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 910; Mature: 910
Protein sequence:
>910_residues MNMIQNILRVVFGSKFERDLKKLIPIVRQINSLEESIKGMDDSTLSSQTKKFKERIVQGESLDSILPEAFATVREVSLRT MGMRHFDVQMMGGIALHGGNISEMKTGEGKTLTSTLAVYLNSLAGNGVHVVTVNDYLAKRDANWMKPIYDFLGISVGVIQ HDMDHEQRKVAYAADITYGTNNEFGFDYLRDNMVSHKDHKVQRSHFFAIVDEVDSILIDEARTPLIISGPSDEATDKYVR VNKIIPKLSEGEDFEVDEKARNVLLTEKGVSHVEEILSIENLYAPENVDLVHHVHQALKAHKIFRVDKDYVVQQGQVVII DEFTGRPMEGRRYSDGLHQAIEAKENVTIAKESQTLASITFQNYFRMYDKLAGMTGTADTEAEEFKKIYNLDVIVIPPNV SVQRKDSPDRVYRTEKEKFQAILTEIRELQSKKQPVLVGTISIEKSEVLSKMLASAGIQHNVLNAKFHQKEAEIVANAGK PGAVTIATNMAGRGTDIVLGGAQLYKENLETWKDEDEIVKQFKESILRQNLEYAESLMQKMDSGTKQKRASEILSSVKIW KKNHEEVLAAGGLHILGTERHEARRIDNQLRGRSGRQGDPGSSRFYLSLQDDLMRIFGSDRISGLMKWANMPEGQEIESK MVSNAIARAQKRVEGHNFDIRKHLLEYDDVMNRQRIVIYKMRNEVLENEDISPLISGFIEETVENQIVTHCEGNNPSAWN LESLKEWSDGLDLNLQIDEVEFKKSKNPQLSLFEKVSSTAKLKYESKAEKIGKDIWKLLERNIFLDILDHRWKEHLYSMD HLREGIWTVGYSERNPLVEYKLQGFRMFDTAIENLKNEIVNFIFRVEVSENSKLPEEKKEYKKVGQEITGGFQEFSGGNL NRSQSNGSSVTVTTSSGGGTERKTSRRRKR
Sequences:
>Translated_910_residues MNMIQNILRVVFGSKFERDLKKLIPIVRQINSLEESIKGMDDSTLSSQTKKFKERIVQGESLDSILPEAFATVREVSLRT MGMRHFDVQMMGGIALHGGNISEMKTGEGKTLTSTLAVYLNSLAGNGVHVVTVNDYLAKRDANWMKPIYDFLGISVGVIQ HDMDHEQRKVAYAADITYGTNNEFGFDYLRDNMVSHKDHKVQRSHFFAIVDEVDSILIDEARTPLIISGPSDEATDKYVR VNKIIPKLSEGEDFEVDEKARNVLLTEKGVSHVEEILSIENLYAPENVDLVHHVHQALKAHKIFRVDKDYVVQQGQVVII DEFTGRPMEGRRYSDGLHQAIEAKENVTIAKESQTLASITFQNYFRMYDKLAGMTGTADTEAEEFKKIYNLDVIVIPPNV SVQRKDSPDRVYRTEKEKFQAILTEIRELQSKKQPVLVGTISIEKSEVLSKMLASAGIQHNVLNAKFHQKEAEIVANAGK PGAVTIATNMAGRGTDIVLGGAQLYKENLETWKDEDEIVKQFKESILRQNLEYAESLMQKMDSGTKQKRASEILSSVKIW KKNHEEVLAAGGLHILGTERHEARRIDNQLRGRSGRQGDPGSSRFYLSLQDDLMRIFGSDRISGLMKWANMPEGQEIESK MVSNAIARAQKRVEGHNFDIRKHLLEYDDVMNRQRIVIYKMRNEVLENEDISPLISGFIEETVENQIVTHCEGNNPSAWN LESLKEWSDGLDLNLQIDEVEFKKSKNPQLSLFEKVSSTAKLKYESKAEKIGKDIWKLLERNIFLDILDHRWKEHLYSMD HLREGIWTVGYSERNPLVEYKLQGFRMFDTAIENLKNEIVNFIFRVEVSENSKLPEEKKEYKKVGQEITGGFQEFSGGNL NRSQSNGSSVTVTTSSGGGTERKTSRRRKR >Mature_910_residues MNMIQNILRVVFGSKFERDLKKLIPIVRQINSLEESIKGMDDSTLSSQTKKFKERIVQGESLDSILPEAFATVREVSLRT MGMRHFDVQMMGGIALHGGNISEMKTGEGKTLTSTLAVYLNSLAGNGVHVVTVNDYLAKRDANWMKPIYDFLGISVGVIQ HDMDHEQRKVAYAADITYGTNNEFGFDYLRDNMVSHKDHKVQRSHFFAIVDEVDSILIDEARTPLIISGPSDEATDKYVR VNKIIPKLSEGEDFEVDEKARNVLLTEKGVSHVEEILSIENLYAPENVDLVHHVHQALKAHKIFRVDKDYVVQQGQVVII DEFTGRPMEGRRYSDGLHQAIEAKENVTIAKESQTLASITFQNYFRMYDKLAGMTGTADTEAEEFKKIYNLDVIVIPPNV SVQRKDSPDRVYRTEKEKFQAILTEIRELQSKKQPVLVGTISIEKSEVLSKMLASAGIQHNVLNAKFHQKEAEIVANAGK PGAVTIATNMAGRGTDIVLGGAQLYKENLETWKDEDEIVKQFKESILRQNLEYAESLMQKMDSGTKQKRASEILSSVKIW KKNHEEVLAAGGLHILGTERHEARRIDNQLRGRSGRQGDPGSSRFYLSLQDDLMRIFGSDRISGLMKWANMPEGQEIESK MVSNAIARAQKRVEGHNFDIRKHLLEYDDVMNRQRIVIYKMRNEVLENEDISPLISGFIEETVENQIVTHCEGNNPSAWN LESLKEWSDGLDLNLQIDEVEFKKSKNPQLSLFEKVSSTAKLKYESKAEKIGKDIWKLLERNIFLDILDHRWKEHLYSMD HLREGIWTVGYSERNPLVEYKLQGFRMFDTAIENLKNEIVNFIFRVEVSENSKLPEEKKEYKKVGQEITGGFQEFSGGNL NRSQSNGSSVTVTTSSGGGTERKTSRRRKR
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family
Homologues:
Organism=Escherichia coli, GI1786287, Length=882, Percent_Identity=51.1337868480726, Blast_Score=863, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SECA_LEPIC (Q72R08)
Other databases:
- EMBL: AE016823 - RefSeq: YP_001889.1 - HSSP: P28366 - ProteinModelPortal: Q72R08 - SMR: Q72R08 - GeneID: 2771151 - GenomeReviews: AE016823_GR - KEGG: lic:LIC11944 - HOGENOM: HBG284200 - OMA: GGMVLHD - ProtClustDB: PRK12904 - BioCyc: LINT267671:LIC_11944-MONOMER - GO: GO:0005737 - HAMAP: MF_01382 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 - Gene3D: G3DSA:1.10.3060.10 - PRINTS: PR00906 - SMART: SM00957 - SMART: SM00958 - TIGRFAMs: TIGR00963
Pfam domain/function: PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW; SSF81767 SecA_PP_bd; SSF81886 SecA_SW
EC number: NA
Molecular weight: Translated: 103531; Mature: 103531
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS01312 SECA; PS51196 SECA_MOTOR_DEAD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMIQNILRVVFGSKFERDLKKLIPIVRQINSLEESIKGMDDSTLSSQTKKFKERIVQGE CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC SLDSILPEAFATVREVSLRTMGMRHFDVQMMGGIALHGGNISEMKTGEGKTLTSTLAVYL CHHHHHHHHHHHHHHHHHHHHCCHHCCCEEECCEEEECCCCCCCCCCCCCHHHHHHHHHH NSLAGNGVHVVTVNDYLAKRDANWMKPIYDFLGISVGVIQHDMDHEQRKVAYAADITYGT HHHCCCCEEEEEECHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHEEEEEEEEECC NNEFGFDYLRDNMVSHKDHKVQRSHFFAIVDEVDSILIDEARTPLIISGPSDEATDKYVR CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH VNKIIPKLSEGEDFEVDEKARNVLLTEKGVSHVEEILSIENLYAPENVDLVHHVHQALKA HHHHCCCCCCCCCCCCCHHHHCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH HKIFRVDKDYVVQQGQVVIIDEFTGRPMEGRRYSDGLHQAIEAKENVTIAKESQTLASIT HHHHCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHH FQNYFRMYDKLAGMTGTADTEAEEFKKIYNLDVIVIPPNVSVQRKDSPDRVYRTEKEKFQ HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEECCCCCEECCCCCHHHHHHHHHHHH AILTEIRELQSKKQPVLVGTISIEKSEVLSKMLASAGIQHNVLNAKFHQKEAEIVANAGK HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHCCCC PGAVTIATNMAGRGTDIVLGGAQLYKENLETWKDEDEIVKQFKESILRQNLEYAESLMQK CCEEEEEECCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MDSGTKQKRASEILSSVKIWKKNHEEVLAAGGLHILGTERHEARRIDNQLRGRSGRQGDP HCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCCC GSSRFYLSLQDDLMRIFGSDRISGLMKWANMPEGQEIESKMVSNAIARAQKRVEGHNFDI CCCEEEEEEHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH RKHLLEYDDVMNRQRIVIYKMRNEVLENEDISPLISGFIEETVENQIVTHCEGNNPSAWN HHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCC LESLKEWSDGLDLNLQIDEVEFKKSKNPQLSLFEKVSSTAKLKYESKAEKIGKDIWKLLE HHHHHHHCCCCCEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNIFLDILDHRWKEHLYSMDHLREGIWTVGYSERNPLVEYKLQGFRMFDTAIENLKNEIV HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEHHHCCHHHHHHHHHHHHHHHH NFIFRVEVSENSKLPEEKKEYKKVGQEITGGFQEFSGGNLNRSQSNGSSVTVTTSSGGGT HHHEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEEECCCCCC ERKTSRRRKR CHHHHHHCCC >Mature Secondary Structure MNMIQNILRVVFGSKFERDLKKLIPIVRQINSLEESIKGMDDSTLSSQTKKFKERIVQGE CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC SLDSILPEAFATVREVSLRTMGMRHFDVQMMGGIALHGGNISEMKTGEGKTLTSTLAVYL CHHHHHHHHHHHHHHHHHHHHCCHHCCCEEECCEEEECCCCCCCCCCCCCHHHHHHHHHH NSLAGNGVHVVTVNDYLAKRDANWMKPIYDFLGISVGVIQHDMDHEQRKVAYAADITYGT HHHCCCCEEEEEECHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHEEEEEEEEECC NNEFGFDYLRDNMVSHKDHKVQRSHFFAIVDEVDSILIDEARTPLIISGPSDEATDKYVR CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH VNKIIPKLSEGEDFEVDEKARNVLLTEKGVSHVEEILSIENLYAPENVDLVHHVHQALKA HHHHCCCCCCCCCCCCCHHHHCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH HKIFRVDKDYVVQQGQVVIIDEFTGRPMEGRRYSDGLHQAIEAKENVTIAKESQTLASIT HHHHCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHH FQNYFRMYDKLAGMTGTADTEAEEFKKIYNLDVIVIPPNVSVQRKDSPDRVYRTEKEKFQ HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEECCCCCEECCCCCHHHHHHHHHHHH AILTEIRELQSKKQPVLVGTISIEKSEVLSKMLASAGIQHNVLNAKFHQKEAEIVANAGK HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHCCCC PGAVTIATNMAGRGTDIVLGGAQLYKENLETWKDEDEIVKQFKESILRQNLEYAESLMQK CCEEEEEECCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MDSGTKQKRASEILSSVKIWKKNHEEVLAAGGLHILGTERHEARRIDNQLRGRSGRQGDP HCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCCC GSSRFYLSLQDDLMRIFGSDRISGLMKWANMPEGQEIESKMVSNAIARAQKRVEGHNFDI CCCEEEEEEHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH RKHLLEYDDVMNRQRIVIYKMRNEVLENEDISPLISGFIEETVENQIVTHCEGNNPSAWN HHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCC LESLKEWSDGLDLNLQIDEVEFKKSKNPQLSLFEKVSSTAKLKYESKAEKIGKDIWKLLE HHHHHHHCCCCCEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNIFLDILDHRWKEHLYSMDHLREGIWTVGYSERNPLVEYKLQGFRMFDTAIENLKNEIV HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEHHHCCHHHHHHHHHHHHHHHH NFIFRVEVSENSKLPEEKKEYKKVGQEITGGFQEFSGGNLNRSQSNGSSVTVTTSSGGGT HHHEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEEECCCCCC ERKTSRRRKR CHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA