Click here to switch to the map view.

The map label for this gene is 45657478

Identifier: 45657478

GI number: 45657478

Start: 1966735

End: 1967613

Strand: Direct

Name: 45657478

Synonym: LIC11606

Alternate gene names: NA

Gene position: 1966735-1967613 (Clockwise)

Preceding gene: 45657477

Following gene: 45657479

Centisome position: 45.98

GC content: 32.88

Gene sequence:

>879_bases
ATGAAAATTCTTCATCTATCAGACTTACATTTTCCGACTTCGCTTCCATTCTTTCAACTTAAGGGTAAGATGTTTGTAGG
ATATTTAAATTATAATTTTAGAAGAAAGAATAAATATCCTAAAAAAGTTTGGGATTCTATCTTAACTTTTATTCAAGAGA
TCAATCCAGATGCGATCGTAGTGTCCGGAGATATTACGAACGTATCTCACGAAGAAGAATTTAAAAAAGCCAGAAAAATG
TTAAGCGAACTTCCGTTGGAAAAAGTTTTTTATATTCCTGGAAACCACGATCGTTATGTAAAACAATCTTCAGGAGAAAA
TGCTTTATATGAAAAATATTTCTCCGAATTTTCCGGAGAACCCATTTCGCATAACAAAAATTATATTCGAATCAAGAAGA
TTCAAAATCTTCATTTTGTGGGTTGGGATTCAAATATTCCTCTTTCAATTTTAAATGCTCATGGACGGATTCACCCGGAA
ATTGTTATACAAACAAAAAGATTTCTTTCCGAGAAAAAAATCACAAACTATATTTTAGTATGTCATCATCCAATCTGGAA
TCCGCTTGATAAACAAGAAACAGTACATCATAAATTGCTAAATCGGGAAGAGGTTGCTTCTTTATTAAAAGAACAGCCGC
CTCTTGTTTATCTTCATGGTCACGTTCATACGAACTGGGTAAAATTTCCTGGAGAAGAATTGCCTTATTATGTAATCAAT
TCTGCTTCTAGCACTCGTCTTCCGGATGCAAAACATAAAAGTGGTTTTCATCTTATCGAAATTCAAAAGCAGAAAATTAA
AATTCAAAGATATACTTACAATTTAGAAAGGTCTAAGTTTACGGAAGCCTCGCTGGTTTCCTATTCGGAAAAGGAATAG

Upstream 100 bases:

>100_bases
AGTCTCCAGTGAAAGGTACACTAACGCAAATTATAAAAGAGAAAGGATCTATTGTTCGCAAAGGTGAAGTGTTGGGAATT
TTGGAACTTTCTGAATCCGA

Downstream 100 bases:

>100_bases
AATGGCAACAATCGAAACAATTAAAATTCAAAGAGAATTGACTAAAATCAAACACCCCGAACTAAAGAAGGATATTGTAT
CTTTAGGTATGATTGGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphohydrolase; Ser/Thr Protein Phosphatase Family Protein; Metallo-Phosphoesterase; Phosphoesterase Protein; Metallo-Dependent Phosphatase; Phosphohydrolase Icc Family; Icc-Related Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKILHLSDLHFPTSLPFFQLKGKMFVGYLNYNFRRKNKYPKKVWDSILTFIQEINPDAIVVSGDITNVSHEEEFKKARKM
LSELPLEKVFYIPGNHDRYVKQSSGENALYEKYFSEFSGEPISHNKNYIRIKKIQNLHFVGWDSNIPLSILNAHGRIHPE
IVIQTKRFLSEKKITNYILVCHHPIWNPLDKQETVHHKLLNREEVASLLKEQPPLVYLHGHVHTNWVKFPGEELPYYVIN
SASSTRLPDAKHKSGFHLIEIQKQKIKIQRYTYNLERSKFTEASLVSYSEKE

Sequences:

>Translated_292_residues
MKILHLSDLHFPTSLPFFQLKGKMFVGYLNYNFRRKNKYPKKVWDSILTFIQEINPDAIVVSGDITNVSHEEEFKKARKM
LSELPLEKVFYIPGNHDRYVKQSSGENALYEKYFSEFSGEPISHNKNYIRIKKIQNLHFVGWDSNIPLSILNAHGRIHPE
IVIQTKRFLSEKKITNYILVCHHPIWNPLDKQETVHHKLLNREEVASLLKEQPPLVYLHGHVHTNWVKFPGEELPYYVIN
SASSTRLPDAKHKSGFHLIEIQKQKIKIQRYTYNLERSKFTEASLVSYSEKE
>Mature_292_residues
MKILHLSDLHFPTSLPFFQLKGKMFVGYLNYNFRRKNKYPKKVWDSILTFIQEINPDAIVVSGDITNVSHEEEFKKARKM
LSELPLEKVFYIPGNHDRYVKQSSGENALYEKYFSEFSGEPISHNKNYIRIKKIQNLHFVGWDSNIPLSILNAHGRIHPE
IVIQTKRFLSEKKITNYILVCHHPIWNPLDKQETVHHKLLNREEVASLLKEQPPLVYLHGHVHTNWVKFPGEELPYYVIN
SASSTRLPDAKHKSGFHLIEIQKQKIKIQRYTYNLERSKFTEASLVSYSEKE

Specific function: Unknown

COG id: COG1409

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34369; Mature: 34369

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILHLSDLHFPTSLPFFQLKGKMFVGYLNYNFRRKNKYPKKVWDSILTFIQEINPDAIV
CEEEEECCCCCCCCCCCEEECCEEEEEEEECCEEECCCCHHHHHHHHHHHHHHCCCCEEE
VSGDITNVSHEEEFKKARKMLSELPLEKVFYIPGNHDRYVKQSSGENALYEKYFSEFSGE
EECCCCCCCCHHHHHHHHHHHHHCCHHHEEECCCCCCCEEECCCCCHHHHHHHHHHHCCC
PISHNKNYIRIKKIQNLHFVGWDSNIPLSILNAHGRIHPEIVIQTKRFLSEKKITNYILV
CCCCCCCEEEEEEECCEEEEECCCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCEEEE
CHHPIWNPLDKQETVHHKLLNREEVASLLKEQPPLVYLHGHVHTNWVKFPGEELPYYVIN
EECCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCEEECEEECCCCCCCEEEEE
SASSTRLPDAKHKSGFHLIEIQKQKIKIQRYTYNLERSKFTEASLVSYSEKE
CCCCCCCCCCCCCCCEEEEEEECCEEEEEEEEEECCHHHCCHHHHHCCCCCC
>Mature Secondary Structure
MKILHLSDLHFPTSLPFFQLKGKMFVGYLNYNFRRKNKYPKKVWDSILTFIQEINPDAIV
CEEEEECCCCCCCCCCCEEECCEEEEEEEECCEEECCCCHHHHHHHHHHHHHHCCCCEEE
VSGDITNVSHEEEFKKARKMLSELPLEKVFYIPGNHDRYVKQSSGENALYEKYFSEFSGE
EECCCCCCCCHHHHHHHHHHHHHCCHHHEEECCCCCCCEEECCCCCHHHHHHHHHHHCCC
PISHNKNYIRIKKIQNLHFVGWDSNIPLSILNAHGRIHPEIVIQTKRFLSEKKITNYILV
CCCCCCCEEEEEEECCEEEEECCCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCEEEE
CHHPIWNPLDKQETVHHKLLNREEVASLLKEQPPLVYLHGHVHTNWVKFPGEELPYYVIN
EECCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCEEECEEECCCCCCCEEEEE
SASSTRLPDAKHKSGFHLIEIQKQKIKIQRYTYNLERSKFTEASLVSYSEKE
CCCCCCCCCCCCCCCEEEEEEECCEEEEEEEEEECCHHHCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA