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The map label for this gene is yliI [C]

Identifier: 45657474

GI number: 45657474

Start: 1962812

End: 1964317

Strand: Direct

Name: yliI [C]

Synonym: LIC11602

Alternate gene names: 45657474

Gene position: 1962812-1964317 (Clockwise)

Preceding gene: 45657473

Following gene: 45657477

Centisome position: 45.89

GC content: 34.4

Gene sequence:

>1506_bases
ATGTTTTTTAAAATAAAATTTTGTAGTAACTGGTTTATTAGAATAAAGGAAAGTAAAATTTCAAACCTACTGTCTAAATG
GTTTCCGTCTTGTCTAAATCGATTAGAACGTGTTTTCTTTAGAATTCAAAAAATGTTTCAAGAATTTCTATTTTTCTTTG
AATCATTCGATAAAAATTTGAAACGTTTACAGATAAACATCCATCAAACGACTCAGATTTTTAAACTGAGTAATAGGATT
TTTTTTACTTGGAAAAAAAATTCCATATACTTTTTTTTATTTATATTTTTTGTTTTTTCAAACGGCTGTGAATGGGTTCA
AAAAACTCTCGTTGAAGTTTTAGGAGCACCTGACAAGTATAAGGCGGAAGGGAATTCTAGCCTTTTGCAACCGATTTATT
CTGGTAAAGACGTAACCAAAGAAAGAATTTTAATTTCTCTTGAAGAAGTTTCTTCGGGATTTCAACAACCAACAGATATT
CAGTTCCCTCCCGGTGAAACGGAAACTTTTTTAGTTACTGAACAAAAAGGTACTCTTCGTTGGGGAAAAGTTCGTAAAAA
TGAAACCGGAATATTACTGACTTTGAATGTTCTTTCTGAATCGGAACAAGGTCTTTTAGGTTTGGCGTTTCATCCTGATT
TTTTAAAAAACGGTAAATTCTATCTTAACTATGTTTTAAAAGTAAACGGAAAAGATACAAGTCGTGTAAGCGAATGGATC
GCTTCTTCTCCTAAAGAATTAGATAAATCTAAAATTACTGCCGAACGAATTATCATGGAAGTGGTTCAGCCGTATCCGAA
TCATAATGCGGGACAACTCGCCTTTGGTCCGGATCATTATTTATATATAGCTTGGGGAGATGGGGGTTGGAAGGATGATC
CGAAAAAAAACGGACAAAACCCTAAGACTTTACTGGGAAGTATGCTGCGTATCGATGTTAATTCTTCGGAAAATGGAAAA
GGTTATAAAATTCCAGAAGACAATCCTTTTATAAATGATTCTTGTTGTGCCCCTGAAACGTTTGCATATGGTTTTAGAAA
TCCTTGGAGGTATAGTTTTGATCCTAAAGGAAGGTTGATTGTTGCAGATGTGGGGCAGGATCTTTGGGAAGAGGTTAGTA
TTGTAGAACGAGGAAAAAATTATGGATGGAATATTAAAGAAGCTTCACATTGTTTTGAACCAAAAAGGAATTGCAAGCAA
GAAGGTCTGATCGATCCGATTTATGAATATGGTCGCGAAGAAGGCCAGTCGATTACTGGTGGTTATGTATATTCTAATTC
TCTAATATCGGATTTAAATGGAAAGTATATTTTTGCAGACTTTGTTTCCGGTAGAATCTGGGCCTTGGATCTTCCAGACG
AATCCACACAACCTGCAAAGAAAGTTTATAGTCTAGGAAAATGGCCTTTACTTATCTCTTCTTTTGGAAAGGATGCGGCT
GGAAAAGTTTATCTAAGTGATTTTGGCAGCGGTAAAATTTATAGAATTGATCGTTCTAAAAATTAA

Upstream 100 bases:

>100_bases
TTGTAAATTTTTTAGATTTTAAAACTTCATCGATTCGGAGAATACAAAAGTTTCTTAATTTGATTTGACTCTTCTTTGAA
AAATAAAATTCTATGACGTT

Downstream 100 bases:

>100_bases
AACTTATGTACTACTCAGAACTATATAATGAATTACCAAGAATTTTTATCTCAAAAACTCGTTTAAGTTATTAGTATTTT
TTTATATAGCTGAGTGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MFFKIKFCSNWFIRIKESKISNLLSKWFPSCLNRLERVFFRIQKMFQEFLFFFESFDKNLKRLQINIHQTTQIFKLSNRI
FFTWKKNSIYFFLFIFFVFSNGCEWVQKTLVEVLGAPDKYKAEGNSSLLQPIYSGKDVTKERILISLEEVSSGFQQPTDI
QFPPGETETFLVTEQKGTLRWGKVRKNETGILLTLNVLSESEQGLLGLAFHPDFLKNGKFYLNYVLKVNGKDTSRVSEWI
ASSPKELDKSKITAERIIMEVVQPYPNHNAGQLAFGPDHYLYIAWGDGGWKDDPKKNGQNPKTLLGSMLRIDVNSSENGK
GYKIPEDNPFINDSCCAPETFAYGFRNPWRYSFDPKGRLIVADVGQDLWEEVSIVERGKNYGWNIKEASHCFEPKRNCKQ
EGLIDPIYEYGREEGQSITGGYVYSNSLISDLNGKYIFADFVSGRIWALDLPDESTQPAKKVYSLGKWPLLISSFGKDAA
GKVYLSDFGSGKIYRIDRSKN

Sequences:

>Translated_501_residues
MFFKIKFCSNWFIRIKESKISNLLSKWFPSCLNRLERVFFRIQKMFQEFLFFFESFDKNLKRLQINIHQTTQIFKLSNRI
FFTWKKNSIYFFLFIFFVFSNGCEWVQKTLVEVLGAPDKYKAEGNSSLLQPIYSGKDVTKERILISLEEVSSGFQQPTDI
QFPPGETETFLVTEQKGTLRWGKVRKNETGILLTLNVLSESEQGLLGLAFHPDFLKNGKFYLNYVLKVNGKDTSRVSEWI
ASSPKELDKSKITAERIIMEVVQPYPNHNAGQLAFGPDHYLYIAWGDGGWKDDPKKNGQNPKTLLGSMLRIDVNSSENGK
GYKIPEDNPFINDSCCAPETFAYGFRNPWRYSFDPKGRLIVADVGQDLWEEVSIVERGKNYGWNIKEASHCFEPKRNCKQ
EGLIDPIYEYGREEGQSITGGYVYSNSLISDLNGKYIFADFVSGRIWALDLPDESTQPAKKVYSLGKWPLLISSFGKDAA
GKVYLSDFGSGKIYRIDRSKN
>Mature_501_residues
MFFKIKFCSNWFIRIKESKISNLLSKWFPSCLNRLERVFFRIQKMFQEFLFFFESFDKNLKRLQINIHQTTQIFKLSNRI
FFTWKKNSIYFFLFIFFVFSNGCEWVQKTLVEVLGAPDKYKAEGNSSLLQPIYSGKDVTKERILISLEEVSSGFQQPTDI
QFPPGETETFLVTEQKGTLRWGKVRKNETGILLTLNVLSESEQGLLGLAFHPDFLKNGKFYLNYVLKVNGKDTSRVSEWI
ASSPKELDKSKITAERIIMEVVQPYPNHNAGQLAFGPDHYLYIAWGDGGWKDDPKKNGQNPKTLLGSMLRIDVNSSENGK
GYKIPEDNPFINDSCCAPETFAYGFRNPWRYSFDPKGRLIVADVGQDLWEEVSIVERGKNYGWNIKEASHCFEPKRNCKQ
EGLIDPIYEYGREEGQSITGGYVYSNSLISDLNGKYIFADFVSGRIWALDLPDESTQPAKKVYSLGKWPLLISSFGKDAA
GKVYLSDFGSGKIYRIDRSKN

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936953, Length=398, Percent_Identity=39.1959798994975, Blast_Score=244, Evalue=2e-64,
Organism=Homo sapiens, GI187936955, Length=398, Percent_Identity=39.1959798994975, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI124248546, Length=377, Percent_Identity=39.2572944297082, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI20143973, Length=389, Percent_Identity=26.9922879177378, Blast_Score=118, Evalue=1e-26,
Organism=Escherichia coli, GI1787060, Length=246, Percent_Identity=28.0487804878049, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 57646; Mature: 57646

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKIKFCSNWFIRIKESKISNLLSKWFPSCLNRLERVFFRIQKMFQEFLFFFESFDKNL
CEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KRLQINIHQTTQIFKLSNRIFFTWKKNSIYFFLFIFFVFSNGCEWVQKTLVEVLGAPDKY
EEEEEEEEHHEEEEEECCEEEEEEECCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
KAEGNSSLLQPIYSGKDVTKERILISLEEVSSGFQQPTDIQFPPGETETFLVTEQKGTLR
CCCCCCHHHHHHHCCCCCCHHHHEEEHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEE
WGKVRKNETGILLTLNVLSESEQGLLGLAFHPDFLKNGKFYLNYVLKVNGKDTSRVSEWI
ECCEECCCCCEEEEEEECCCCCCCCEEEEECCHHHHCCCEEEEEEEEECCCCHHHHHHHH
ASSPKELDKSKITAERIIMEVVQPYPNHNAGQLAFGPDHYLYIAWGDGGWKDDPKKNGQN
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCC
PKTLLGSMLRIDVNSSENGKGYKIPEDNPFINDSCCAPETFAYGFRNPWRYSFDPKGRLI
HHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEE
VADVGQDLWEEVSIVERGKNYGWNIKEASHCFEPKRNCKQEGLIDPIYEYGREEGQSITG
EECCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHCCHHCCCCCHHHHHCHHCCCCCCC
GYVYSNSLISDLNGKYIFADFVSGRIWALDLPDESTQPAKKVYSLGKWPLLISSFGKDAA
CEEECCCHHHHCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHHCCCCCC
GKVYLSDFGSGKIYRIDRSKN
CEEEEEECCCCEEEEECCCCC
>Mature Secondary Structure
MFFKIKFCSNWFIRIKESKISNLLSKWFPSCLNRLERVFFRIQKMFQEFLFFFESFDKNL
CEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KRLQINIHQTTQIFKLSNRIFFTWKKNSIYFFLFIFFVFSNGCEWVQKTLVEVLGAPDKY
EEEEEEEEHHEEEEEECCEEEEEEECCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
KAEGNSSLLQPIYSGKDVTKERILISLEEVSSGFQQPTDIQFPPGETETFLVTEQKGTLR
CCCCCCHHHHHHHCCCCCCHHHHEEEHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEE
WGKVRKNETGILLTLNVLSESEQGLLGLAFHPDFLKNGKFYLNYVLKVNGKDTSRVSEWI
ECCEECCCCCEEEEEEECCCCCCCCEEEEECCHHHHCCCEEEEEEEEECCCCHHHHHHHH
ASSPKELDKSKITAERIIMEVVQPYPNHNAGQLAFGPDHYLYIAWGDGGWKDDPKKNGQN
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCC
PKTLLGSMLRIDVNSSENGKGYKIPEDNPFINDSCCAPETFAYGFRNPWRYSFDPKGRLI
HHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEE
VADVGQDLWEEVSIVERGKNYGWNIKEASHCFEPKRNCKQEGLIDPIYEYGREEGQSITG
EECCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHCCHHCCCCCHHHHHCHHCCCCCCC
GYVYSNSLISDLNGKYIFADFVSGRIWALDLPDESTQPAKKVYSLGKWPLLISSFGKDAA
CEEECCCHHHHCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHHCCCCCC
GKVYLSDFGSGKIYRIDRSKN
CEEEEEECCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]