Click here to switch to the map view.

The map label for this gene is yjeS [H]

Identifier: 45657378

GI number: 45657378

Start: 1853859

End: 1854797

Strand: Direct

Name: yjeS [H]

Synonym: LIC11503

Alternate gene names: 45657378

Gene position: 1853859-1854797 (Clockwise)

Preceding gene: 45657376

Following gene: 45657379

Centisome position: 43.34

GC content: 35.68

Gene sequence:

>939_bases
ATGATCGAAAGTAAAGAAATAATTTCCGAATTTAAAACTTTGATTGAAGGATCTGGTTTTGATCTCTATGGGATTTGTGA
AGCCAACATTCCGGAAGAAGATAGAGAAAATATTCTTCTATGGGTAAAAGAGCACAAACACGGAAATATGGAATGGTATC
CTAAGAATATGGATCTTCGTTTAGATTTTAAGAATCTGGGTTTTGATCCGCAGTCCGTAATTGTACTCGGAGCGATTTAC
AATGATCCGGAATACGAAAAAATTCGAAGCGGAATGACTTTTCAATTTTCTAAATATGCGGTTGGCGAAGATTATCACAG
AGTATTGAGAAAACATGCAAAACCTTTGATAAAAGCTCTTCAAAAAAAATATCCGAATCATCATTTTCGTCAAGGTGTAG
ATTCTTTGCCAGTTCCTGAGAAAGTTTTAGCTAGACTTGCAGGGCTTGGATGGAAGGGAAAAAACACGAATTTGATTCAT
CCAGAAATTGGATCTTTCTTTTTTATCACTGTCATACTTACTGATTTGCCGATTTATACCACTCAGGTTCAGATAAAAGA
TCGTTGTGGAACCTGCACGGCGTGTATAGACGCGTGTCCAACTGGAGCATTAAAACCCTATCAAATCGACGCTGGAAAAT
GTATCTCTCATCATACTTTAGAGGATGGATCGGAAGAAATTCCGGATACATACGGATGGCTTGTGGGTTGTGATATATGT
CAAGACGTGTGTCCTTGGAATCGAGTAAAAGCGTTTAAAAAAGGAATTAGAACTGGATTAGAAGAATTTAAAGTTCGGTC
TTATTTAAAAGAAAATCCGGAATCGATTTTAACTCTAAACGAACAGGAATTTGAAAAAACCTTTTCAGATTCCGCTATAT
CTAGGATGAACTTTAAAATGTATCAAAGAAACGTAAATAAGTTAAAAAACAAAATCTAA

Upstream 100 bases:

>100_bases
GAAATGGAAATTGGAGGTTTTGCAAAGATTGTTAAATCCTTGCGAGTAAAATTAGAATTTTCTGATAATTCTTTTTGCAT
ATTCAATTTATATACACTTT

Downstream 100 bases:

>100_bases
AAATTGTAATATCTGTTTTGGAAATAAATTACTTTTCTCTTTTGAACTTTAGGTAGGCCTTACTATTTGGATACATAAAA
AGAATACTTGGATTAGATTG

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MIESKEIISEFKTLIEGSGFDLYGICEANIPEEDRENILLWVKEHKHGNMEWYPKNMDLRLDFKNLGFDPQSVIVLGAIY
NDPEYEKIRSGMTFQFSKYAVGEDYHRVLRKHAKPLIKALQKKYPNHHFRQGVDSLPVPEKVLARLAGLGWKGKNTNLIH
PEIGSFFFITVILTDLPIYTTQVQIKDRCGTCTACIDACPTGALKPYQIDAGKCISHHTLEDGSEEIPDTYGWLVGCDIC
QDVCPWNRVKAFKKGIRTGLEEFKVRSYLKENPESILTLNEQEFEKTFSDSAISRMNFKMYQRNVNKLKNKI

Sequences:

>Translated_312_residues
MIESKEIISEFKTLIEGSGFDLYGICEANIPEEDRENILLWVKEHKHGNMEWYPKNMDLRLDFKNLGFDPQSVIVLGAIY
NDPEYEKIRSGMTFQFSKYAVGEDYHRVLRKHAKPLIKALQKKYPNHHFRQGVDSLPVPEKVLARLAGLGWKGKNTNLIH
PEIGSFFFITVILTDLPIYTTQVQIKDRCGTCTACIDACPTGALKPYQIDAGKCISHHTLEDGSEEIPDTYGWLVGCDIC
QDVCPWNRVKAFKKGIRTGLEEFKVRSYLKENPESILTLNEQEFEKTFSDSAISRMNFKMYQRNVNKLKNKI
>Mature_312_residues
MIESKEIISEFKTLIEGSGFDLYGICEANIPEEDRENILLWVKEHKHGNMEWYPKNMDLRLDFKNLGFDPQSVIVLGAIY
NDPEYEKIRSGMTFQFSKYAVGEDYHRVLRKHAKPLIKALQKKYPNHHFRQGVDSLPVPEKVLARLAGLGWKGKNTNLIH
PEIGSFFFITVILTDLPIYTTQVQIKDRCGTCTACIDACPTGALKPYQIDAGKCISHHTLEDGSEEIPDTYGWLVGCDIC
QDVCPWNRVKAFKKGIRTGLEEFKVRSYLKENPESILTLNEQEFEKTFSDSAISRMNFKMYQRNVNKLKNKI

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=297, Percent_Identity=35.3535353535354, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 35877; Mature: 35877

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIESKEIISEFKTLIEGSGFDLYGICEANIPEEDRENILLWVKEHKHGNMEWYPKNMDLR
CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCEEECCCCCEE
LDFKNLGFDPQSVIVLGAIYNDPEYEKIRSGMTFQFSKYAVGEDYHRVLRKHAKPLIKAL
EEHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHH
QKKYPNHHFRQGVDSLPVPEKVLARLAGLGWKGKNTNLIHPEIGSFFFITVILTDLPIYT
HHHCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
TQVQIKDRCGTCTACIDACPTGALKPYQIDAGKCISHHTLEDGSEEIPDTYGWLVGCDIC
EEEEECCCCCHHHHHHHHCCCCCCCCEEECCCCHHHCCCCCCCCHHCCCHHHHHHHHHHH
QDVCPWNRVKAFKKGIRTGLEEFKVRSYLKENPESILTLNEQEFEKTFSDSAISRMNFKM
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHH
YQRNVNKLKNKI
HHHHHHHHHHCC
>Mature Secondary Structure
MIESKEIISEFKTLIEGSGFDLYGICEANIPEEDRENILLWVKEHKHGNMEWYPKNMDLR
CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCEEECCCCCEE
LDFKNLGFDPQSVIVLGAIYNDPEYEKIRSGMTFQFSKYAVGEDYHRVLRKHAKPLIKAL
EEHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHH
QKKYPNHHFRQGVDSLPVPEKVLARLAGLGWKGKNTNLIHPEIGSFFFITVILTDLPIYT
HHHCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
TQVQIKDRCGTCTACIDACPTGALKPYQIDAGKCISHHTLEDGSEEIPDTYGWLVGCDIC
EEEEECCCCCHHHHHHHHCCCCCCCCEEECCCCHHHCCCCCCCCHHCCCHHHHHHHHHHH
QDVCPWNRVKAFKKGIRTGLEEFKVRSYLKENPESILTLNEQEFEKTFSDSAISRMNFKM
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHH
YQRNVNKLKNKI
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]