| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is wcaJ
Identifier: 45657334
GI number: 45657334
Start: 1800576
End: 1801997
Strand: Direct
Name: wcaJ
Synonym: LIC11459
Alternate gene names: 45657334
Gene position: 1800576-1801997 (Clockwise)
Preceding gene: 45657333
Following gene: 45657335
Centisome position: 42.1
GC content: 35.72
Gene sequence:
>1422_bases TTGATTATGCTAAAGGAAAGAAGTCAAACATTCAAACTGATATTTACAATATTAGATTTTTCAAATGCTTTATTTAGCGG TATTTTGGCATTCGTTTTTAGATTTTATTTTTTAGACGAAAACGGAACGGATCGGCGTTACGTAGATATTGAAAGTTATA TATTCCTTTTCTTTTTATTAGCTTTTTTTCAAGTGATTGTGTTTATTGCGATCGATCTTTATCATCCTAGAAGAGGTCTT TCTTTTATAGACGAATTTTTGACGATTATAAGCGGGGTATTTCTCAATCTTGTATTAGTGCTTGCCGTTTTATTCTTTTT TAGAGGGGACTTAGGAAGCGAACGATTTTCCAGATATGTAGTACTTGCCTTTGCGATGATCAACATTTTGACCTCAAGTA TTCTTCATTATATTGCCAGAATCGTTTTGCGTATTCTTCGTAAAAAAGGATATAATTTAAGAAGTGTATTGGTTGTAGGT GTTTCTGAAACTTCAAAACGTTTTAACGACGCGGTCATCAAACATGGAATATACGGCTATAAGATCTTAGGATTTGTTCA AACAAAAAGTGCAAAACCGGTTAGCAAAGAAATGAAAGTGGTTGGTAAGATCGAAAAGATCTCGCACGTTTTAGAAAAAG AAAGACCCGATTTAGTGGTTTATACTTTGGAACCTTCGGAAGGAGATTATCTTAAAGAAGTTTTGGACGCGTGCGATCAC GAAGGAATTGACCTTAAGATCGTTCCTGGTTTCCAGGAATTCATCAAAGCTCGTGGAAGAGTAGAAGAAATGGAAGGTCT TCCAGTAATTTCGATCCGGAACATTCCGATTCGATTAGGATATAATAAATTCGTAAAACGAATTTTCGATCTAACCTTTT CGATTCTTTTTATTTTATTTTTTTCCCCATTTTATTTATTGATGGCCTTGCTCGTAAAACTAACTTCGCCCGGTCCGGTG TTTTACTATCAGGAAAGAGTAGGGTTGGATAATAAGAAGTTTAAGATGATTAAGTTTAGAACGATGGTCGTTCAAGCTAA AACCCAATCCGAAACGACTTGGACGGTTCAGAACGATCCCAGGGTTACGAGTGTGGGAAGAATTCTACGTAAACTTTCTT TAGATGAAACTCCTCAGTTTTTTAACGTTTTATTTGGGGATATGTCAGTTGTTGGGCCCAGACCGGAACGCCCTCATTTT GTAGAAAAGTTTAAAAATGATCATAAACATTATATGAGAAGACACGCGGTTAAGGCGGGGATTACAGGACTCGCACAGGT TAAAGGTTTGAGAGGAGATACTTCGATTGAAGATAGAATTGCCGCGGATATTTATTATATTGAAAATTGGTCTATTTGGC TGGATTTGAAAATTATTCTACTGACTCCTTTTAAAGGAATCATGGACAAAAACGCATACTAA
Upstream 100 bases:
>100_bases GACAACAAGATTCTTCGGAACTGACCAGAGTTCGTTTGTTTAGATTCCGAAAACGTCCTTTCCAAGCGGGGGACAGCACT GGAATTTCTTCGGAGAACCC
Downstream 100 bases:
>100_bases AACACTCTTGCCGCAAGGGGAGAATCATGAACATCAACGAAGATTCTTTGCAAAAGATCGCCGAACTCTCTCGTTTAAAA ATTCGTTCCGAAGAGAAAGA
Product: UDP-glucosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MIMLKERSQTFKLIFTILDFSNALFSGILAFVFRFYFLDENGTDRRYVDIESYIFLFFLLAFFQVIVFIAIDLYHPRRGL SFIDEFLTIISGVFLNLVLVLAVLFFFRGDLGSERFSRYVVLAFAMINILTSSILHYIARIVLRILRKKGYNLRSVLVVG VSETSKRFNDAVIKHGIYGYKILGFVQTKSAKPVSKEMKVVGKIEKISHVLEKERPDLVVYTLEPSEGDYLKEVLDACDH EGIDLKIVPGFQEFIKARGRVEEMEGLPVISIRNIPIRLGYNKFVKRIFDLTFSILFILFFSPFYLLMALLVKLTSPGPV FYYQERVGLDNKKFKMIKFRTMVVQAKTQSETTWTVQNDPRVTSVGRILRKLSLDETPQFFNVLFGDMSVVGPRPERPHF VEKFKNDHKHYMRRHAVKAGITGLAQVKGLRGDTSIEDRIAADIYYIENWSIWLDLKIILLTPFKGIMDKNAY
Sequences:
>Translated_473_residues MIMLKERSQTFKLIFTILDFSNALFSGILAFVFRFYFLDENGTDRRYVDIESYIFLFFLLAFFQVIVFIAIDLYHPRRGL SFIDEFLTIISGVFLNLVLVLAVLFFFRGDLGSERFSRYVVLAFAMINILTSSILHYIARIVLRILRKKGYNLRSVLVVG VSETSKRFNDAVIKHGIYGYKILGFVQTKSAKPVSKEMKVVGKIEKISHVLEKERPDLVVYTLEPSEGDYLKEVLDACDH EGIDLKIVPGFQEFIKARGRVEEMEGLPVISIRNIPIRLGYNKFVKRIFDLTFSILFILFFSPFYLLMALLVKLTSPGPV FYYQERVGLDNKKFKMIKFRTMVVQAKTQSETTWTVQNDPRVTSVGRILRKLSLDETPQFFNVLFGDMSVVGPRPERPHF VEKFKNDHKHYMRRHAVKAGITGLAQVKGLRGDTSIEDRIAADIYYIENWSIWLDLKIILLTPFKGIMDKNAY >Mature_473_residues MIMLKERSQTFKLIFTILDFSNALFSGILAFVFRFYFLDENGTDRRYVDIESYIFLFFLLAFFQVIVFIAIDLYHPRRGL SFIDEFLTIISGVFLNLVLVLAVLFFFRGDLGSERFSRYVVLAFAMINILTSSILHYIARIVLRILRKKGYNLRSVLVVG VSETSKRFNDAVIKHGIYGYKILGFVQTKSAKPVSKEMKVVGKIEKISHVLEKERPDLVVYTLEPSEGDYLKEVLDACDH EGIDLKIVPGFQEFIKARGRVEEMEGLPVISIRNIPIRLGYNKFVKRIFDLTFSILFILFFSPFYLLMALLVKLTSPGPV FYYQERVGLDNKKFKMIKFRTMVVQAKTQSETTWTVQNDPRVTSVGRILRKLSLDETPQFFNVLFGDMSVVGPRPERPHF VEKFKNDHKHYMRRHAVKAGITGLAQVKGLRGDTSIEDRIAADIYYIENWSIWLDLKIILLTPFKGIMDKNAY
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=430, Percent_Identity=33.4883720930233, Blast_Score=238, Evalue=6e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017473 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 54794; Mature: 54794
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMLKERSQTFKLIFTILDFSNALFSGILAFVFRFYFLDENGTDRRYVDIESYIFLFFLL CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH AFFQVIVFIAIDLYHPRRGLSFIDEFLTIISGVFLNLVLVLAVLFFFRGDLGSERFSRYV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VLAFAMINILTSSILHYIARIVLRILRKKGYNLRSVLVVGVSETSKRFNDAVIKHGIYGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCE KILGFVQTKSAKPVSKEMKVVGKIEKISHVLEKERPDLVVYTLEPSEGDYLKEVLDACDH EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCC EGIDLKIVPGFQEFIKARGRVEEMEGLPVISIRNIPIRLGYNKFVKRIFDLTFSILFILF CCCEEEEECCHHHHHHHCCCHHHHCCCCEEEEECCEEEECHHHHHHHHHHHHHHHHHHHH FSPFYLLMALLVKLTSPGPVFYYQERVGLDNKKFKMIKFRTMVVQAKTQSETTWTVQNDP HHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCCCCHHEEEEEHEEEEECCCCCEEEECCCC RVTSVGRILRKLSLDETPQFFNVLFGDMSVVGPRPERPHFVEKFKNDHKHYMRRHAVKAG CHHHHHHHHHHHCCCCCHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC ITGLAQVKGLRGDTSIEDRIAADIYYIENWSIWLDLKIILLTPFKGIMDKNAY CHHHHHHCCCCCCCCHHHHHHEEEEEEECEEEEEEEEEEEECCCHHHHCCCCC >Mature Secondary Structure MIMLKERSQTFKLIFTILDFSNALFSGILAFVFRFYFLDENGTDRRYVDIESYIFLFFLL CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH AFFQVIVFIAIDLYHPRRGLSFIDEFLTIISGVFLNLVLVLAVLFFFRGDLGSERFSRYV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VLAFAMINILTSSILHYIARIVLRILRKKGYNLRSVLVVGVSETSKRFNDAVIKHGIYGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCE KILGFVQTKSAKPVSKEMKVVGKIEKISHVLEKERPDLVVYTLEPSEGDYLKEVLDACDH EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCC EGIDLKIVPGFQEFIKARGRVEEMEGLPVISIRNIPIRLGYNKFVKRIFDLTFSILFILF CCCEEEEECCHHHHHHHCCCHHHHCCCCEEEEECCEEEECHHHHHHHHHHHHHHHHHHHH FSPFYLLMALLVKLTSPGPVFYYQERVGLDNKKFKMIKFRTMVVQAKTQSETTWTVQNDP HHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCCCCHHEEEEEHEEEEECCCCCEEEECCCC RVTSVGRILRKLSLDETPQFFNVLFGDMSVVGPRPERPHFVEKFKNDHKHYMRRHAVKAG CHHHHHHHHHHHCCCCCHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC ITGLAQVKGLRGDTSIEDRIAADIYYIENWSIWLDLKIILLTPFKGIMDKNAY CHHHHHHCCCCCCCCHHHHHHEEEEEEECEEEEEEEEEEEECCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8759852; 9097040; 9278503 [H]