Click here to switch to the map view.

The map label for this gene is ybfF [C]

Identifier: 45657306

GI number: 45657306

Start: 1756884

End: 1757873

Strand: Reverse

Name: ybfF [C]

Synonym: LIC11430

Alternate gene names: 45657306

Gene position: 1757873-1756884 (Counterclockwise)

Preceding gene: 45657308

Following gene: 45657298

Centisome position: 41.1

GC content: 32.83

Gene sequence:

>990_bases
ATGAAAAATTTTCGTTCTGCTTCAAGTCCAAAACCAATTCAAATTCCAATCGGAAATTCTCAAGTTCTAACTGCGGAAAT
TTTTGGAAAATTTCCTGTTTCTAAAAACTCCCCTTCTCCAGTAATTTGCATTCACGGCCTTACTGGAAATCTTAAAAATT
TCACTCCTCTTGCAAGAGATTTAGTAAAACAAGGTCTTACAATAATCACATATGACCTGAGAGGTAGAGGTCAATCTTCT
AAACCACAGATTCAATATTCCCAGGATCTACATGCAAAAGATTTAAAATACTTATTAGATTTTCTAAAAATTGAAAAAGC
TAATTTACTTGCGCATTCTTTGGGTTGCTGGATTTCTCTTGCGTTCGGAAAGAACTTTCCCGAAAGAACAGATAAAATTT
GTTTGATAGATGGAGGAGGACAACTTTCCTTCAAAAGAAAACTTTCCAGTTTATTCATGATCCAAGAATCTCTTCAACGT
TTAGGGAAATCGTTTCCATCCAGAGAAACGTATATAGAACTTGCTAAAAAATCTTCAATTTTCAGTTCTTGGAACAAAAA
CATAGAGAATTTTCTAAATTATGAATTGGAAGAAATTTATGAGAATGACTCCGTCCAATACAGATGTAATATCCCTATTT
ACGTGATTGATTCTGAATTAAAAAGTATGGGAGGAGCATTCAAACCTTGGCATATTCCACTCCAAATTTTACGCAACCCA
ATTAAAAATTTTAGAATATTCAATAAAAATAAAATACTTCCTTATTCTCAAATCCATTCCCCAGTTCTCGTAATCCAGGC
CGGAAAATATAATTTTCAAAAAGGAGACGAACTACTTCCAGATGCTGCGATTAACATTTTTAAAAAAAAACTAAAAAAAG
TAGTGTTTCTTACCTTACCAGATAAAAATCACTACGAAACAATCCTTCTTTCCGATTTAAAAAGGGACGAAACCATCTCT
TGGTTTTTTCAAAGTTTCGATCCTCTTTGA

Upstream 100 bases:

>100_bases
AATATTATAATACAGAATGGATTTTCATTTCTTTACAATTCAATCAGGTCTAAGATAAAAAATCGTAGACACATTTCAGT
TAGACCCGATATACAAAAGA

Downstream 100 bases:

>100_bases
TTGGTTTTTAAAAATTAGAAATACATTATTTCTAATTTTAAAACTCATCTATAGGATAAAATCTCTTCTTTTTGTTTTTA
TTCTAAGTTGATTTATAATG

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKNFRSASSPKPIQIPIGNSQVLTAEIFGKFPVSKNSPSPVICIHGLTGNLKNFTPLARDLVKQGLTIITYDLRGRGQSS
KPQIQYSQDLHAKDLKYLLDFLKIEKANLLAHSLGCWISLAFGKNFPERTDKICLIDGGGQLSFKRKLSSLFMIQESLQR
LGKSFPSRETYIELAKKSSIFSSWNKNIENFLNYELEEIYENDSVQYRCNIPIYVIDSELKSMGGAFKPWHIPLQILRNP
IKNFRIFNKNKILPYSQIHSPVLVIQAGKYNFQKGDELLPDAAINIFKKKLKKVVFLTLPDKNHYETILLSDLKRDETIS
WFFQSFDPL

Sequences:

>Translated_329_residues
MKNFRSASSPKPIQIPIGNSQVLTAEIFGKFPVSKNSPSPVICIHGLTGNLKNFTPLARDLVKQGLTIITYDLRGRGQSS
KPQIQYSQDLHAKDLKYLLDFLKIEKANLLAHSLGCWISLAFGKNFPERTDKICLIDGGGQLSFKRKLSSLFMIQESLQR
LGKSFPSRETYIELAKKSSIFSSWNKNIENFLNYELEEIYENDSVQYRCNIPIYVIDSELKSMGGAFKPWHIPLQILRNP
IKNFRIFNKNKILPYSQIHSPVLVIQAGKYNFQKGDELLPDAAINIFKKKLKKVVFLTLPDKNHYETILLSDLKRDETIS
WFFQSFDPL
>Mature_329_residues
MKNFRSASSPKPIQIPIGNSQVLTAEIFGKFPVSKNSPSPVICIHGLTGNLKNFTPLARDLVKQGLTIITYDLRGRGQSS
KPQIQYSQDLHAKDLKYLLDFLKIEKANLLAHSLGCWISLAFGKNFPERTDKICLIDGGGQLSFKRKLSSLFMIQESLQR
LGKSFPSRETYIELAKKSSIFSSWNKNIENFLNYELEEIYENDSVQYRCNIPIYVIDSELKSMGGAFKPWHIPLQILRNP
IKNFRIFNKNKILPYSQIHSPVLVIQAGKYNFQKGDELLPDAAINIFKKKLKKVVFLTLPDKNHYETILLSDLKRDETIS
WFFQSFDPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 37694; Mature: 37694

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFRSASSPKPIQIPIGNSQVLTAEIFGKFPVSKNSPSPVICIHGLTGNLKNFTPLARD
CCCCCCCCCCCCEEEECCCCEEEEEEHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
LVKQGLTIITYDLRGRGQSSKPQIQYSQDLHAKDLKYLLDFLKIEKANLLAHSLGCWISL
HHHCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
AFGKNFPERTDKICLIDGGGQLSFKRKLSSLFMIQESLQRLGKSFPSRETYIELAKKSSI
ECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FSSWNKNIENFLNYELEEIYENDSVQYRCNIPIYVIDSELKSMGGAFKPWHIPLQILRNP
HHHHHHHHHHHHCHHHHHHHCCCCEEEEECCEEEEECHHHHHCCCCCCCHHHHHHHHHHH
IKNFRIFNKNKILPYSQIHSPVLVIQAGKYNFQKGDELLPDAAINIFKKKLKKVVFLTLP
HHHCEEECCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECC
DKNHYETILLSDLKRDETISWFFQSFDPL
CCCCCCEEEEHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKNFRSASSPKPIQIPIGNSQVLTAEIFGKFPVSKNSPSPVICIHGLTGNLKNFTPLARD
CCCCCCCCCCCCEEEECCCCEEEEEEHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
LVKQGLTIITYDLRGRGQSSKPQIQYSQDLHAKDLKYLLDFLKIEKANLLAHSLGCWISL
HHHCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
AFGKNFPERTDKICLIDGGGQLSFKRKLSSLFMIQESLQRLGKSFPSRETYIELAKKSSI
ECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FSSWNKNIENFLNYELEEIYENDSVQYRCNIPIYVIDSELKSMGGAFKPWHIPLQILRNP
HHHHHHHHHHHHCHHHHHHHCCCCEEEEECCEEEEECHHHHHCCCCCCCHHHHHHHHHHH
IKNFRIFNKNKILPYSQIHSPVLVIQAGKYNFQKGDELLPDAAINIFKKKLKKVVFLTLP
HHHCEEECCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECC
DKNHYETILLSDLKRDETISWFFQSFDPL
CCCCCCEEEEHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]