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The map label for this gene is rdoA [H]

Identifier: 45657298

GI number: 45657298

Start: 1749349

End: 1750395

Strand: Reverse

Name: rdoA [H]

Synonym: LIC11422

Alternate gene names: 45657298

Gene position: 1750395-1749349 (Counterclockwise)

Preceding gene: 45657306

Following gene: 45657297

Centisome position: 40.92

GC content: 36.87

Gene sequence:

>1047_bases
GTGGCAGATTTTTTTCAACTCAACCCAGGAGAAATTCTTACTCTGGCCGAAAAGGCAGGTTATGAACCTTCCGGTCATTG
TATGGCTCTCAATAGTTTAGAAAACAGAGTTTTTGATCTCAGACTAGAAGATGGCTCCCATATTATTTCTAAATTCTATC
GCCCAGGCAGGTGGAATCGGACACAAATCCTAGAAGAACATAAATTCCTGCAAGATCTGAAAGAAGAAGAAATTCCGGTT
TGTTCCCCTATCTTATTTCAGGACGGAAATAGTTTATCTTTGTTTCAGGAAAAAATATTTTATTCCTTTTGGCCCCGTGT
AGGTGGAAGATCCCCAGACGAACTCAGTCCTGAAAATCTAAAAATTATAGGAAGACTTCTTGCTAGAATTCATAATGTAG
GTCAGTCCCAATCCTTCAAACATAGGATCACATTAAATTCTAAAACCTATGGAACCGACCCACTGGAAAATTTACTTCAA
GGAGAATGGATTCCTTCTAGTTGCAAAAAAGAATATTTGGAAACCACAAATCAGATTTTAGATTTATTCCAAGAAAATAT
GAAATCAGTCCCATTCCATAGAATTCACGGAGATTGCCATAAAGGAAATCTACTCTTTGGAAAAGAAGGTTGGTTTTTTG
TAGACTTTGACGACTGTCTACAAGGTCCAGCGATTCAAGACTTTTGGATGTTACTTTCCAAAGGAAAAGAAGGAATCGAA
GAAAGAGAATACATTCTTTCCGGTTACAGAGAATTTAGAGATTTTGACGATCGTTGGTTTGATCTAGTAGAAATTCTGAG
AGCGATGAGATTTGTTCATTATTCTGCTTGGATCGCCAACCGATTTCATTCCGATCCTTCATTTCCGACTGCGTTTCCTC
ATTTTTCAGGAACAGACTATTGGGAAAAAGAAACCTTAGAGCTGAAAGAACAATACAATCTAATTCGAAATTTATCTGGA
AAGAAAAGTTTCTTTTCTGTTACAGAATCGGTTTCAGAAGATAAAGAACTTACCAATCGGGATTTTTTTTGGGATTTAGA
AGACTAA

Upstream 100 bases:

>100_bases
TATTGAAAACCAAATTCCATCTATATTGGAACAAAACACTCAAGTTCTATGTTCTTTATAAAAAAATTTCCAAGAAAACT
GGAAACAAGAACATGGAGTT

Downstream 100 bases:

>100_bases
CCGATTGATTTTGTAACTGAAAAGTAATAATCCAGTATTGGTTCCAGACAAAATTTCAGTTGTCCGGTTTCCTGGATTCA
AAAGACTCAAGAAGAACTCT

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MADFFQLNPGEILTLAEKAGYEPSGHCMALNSLENRVFDLRLEDGSHIISKFYRPGRWNRTQILEEHKFLQDLKEEEIPV
CSPILFQDGNSLSLFQEKIFYSFWPRVGGRSPDELSPENLKIIGRLLARIHNVGQSQSFKHRITLNSKTYGTDPLENLLQ
GEWIPSSCKKEYLETTNQILDLFQENMKSVPFHRIHGDCHKGNLLFGKEGWFFVDFDDCLQGPAIQDFWMLLSKGKEGIE
EREYILSGYREFRDFDDRWFDLVEILRAMRFVHYSAWIANRFHSDPSFPTAFPHFSGTDYWEKETLELKEQYNLIRNLSG
KKSFFSVTESVSEDKELTNRDFFWDLED

Sequences:

>Translated_348_residues
MADFFQLNPGEILTLAEKAGYEPSGHCMALNSLENRVFDLRLEDGSHIISKFYRPGRWNRTQILEEHKFLQDLKEEEIPV
CSPILFQDGNSLSLFQEKIFYSFWPRVGGRSPDELSPENLKIIGRLLARIHNVGQSQSFKHRITLNSKTYGTDPLENLLQ
GEWIPSSCKKEYLETTNQILDLFQENMKSVPFHRIHGDCHKGNLLFGKEGWFFVDFDDCLQGPAIQDFWMLLSKGKEGIE
EREYILSGYREFRDFDDRWFDLVEILRAMRFVHYSAWIANRFHSDPSFPTAFPHFSGTDYWEKETLELKEQYNLIRNLSG
KKSFFSVTESVSEDKELTNRDFFWDLED
>Mature_347_residues
ADFFQLNPGEILTLAEKAGYEPSGHCMALNSLENRVFDLRLEDGSHIISKFYRPGRWNRTQILEEHKFLQDLKEEEIPVC
SPILFQDGNSLSLFQEKIFYSFWPRVGGRSPDELSPENLKIIGRLLARIHNVGQSQSFKHRITLNSKTYGTDPLENLLQG
EWIPSSCKKEYLETTNQILDLFQENMKSVPFHRIHGDCHKGNLLFGKEGWFFVDFDDCLQGPAIQDFWMLLSKGKEGIEE
REYILSGYREFRDFDDRWFDLVEILRAMRFVHYSAWIANRFHSDPSFPTAFPHFSGTDYWEKETLELKEQYNLIRNLSGK
KSFFSVTESVSEDKELTNRDFFWDLED

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=315, Percent_Identity=37.7777777777778, Blast_Score=219, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 40902; Mature: 40771

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFFQLNPGEILTLAEKAGYEPSGHCMALNSLENRVFDLRLEDGSHIISKFYRPGRWNR
CCCCEECCCCCEEEEHHHCCCCCCCCEEEHHHHHCCEEEEEECCCHHHHHHHCCCCCCCH
TQILEEHKFLQDLKEEEIPVCSPILFQDGNSLSLFQEKIFYSFWPRVGGRSPDELSPENL
HHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
KIIGRLLARIHNVGQSQSFKHRITLNSKTYGTDPLENLLQGEWIPSSCKKEYLETTNQIL
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
DLFQENMKSVPFHRIHGDCHKGNLLFGKEGWFFVDFDDCLQGPAIQDFWMLLSKGKEGIE
HHHHHHHHCCCCHHHCCCCCCCCEEEECCCCEEEEHHHHHCCCCHHHHHHHHHHCCCCHH
EREYILSGYREFRDFDDRWFDLVEILRAMRFVHYSAWIANRFHSDPSFPTAFPHFSGTDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
WEKETLELKEQYNLIRNLSGKKSFFSVTESVSEDKELTNRDFFWDLED
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure 
ADFFQLNPGEILTLAEKAGYEPSGHCMALNSLENRVFDLRLEDGSHIISKFYRPGRWNR
CCCEECCCCCEEEEHHHCCCCCCCCEEEHHHHHCCEEEEEECCCHHHHHHHCCCCCCCH
TQILEEHKFLQDLKEEEIPVCSPILFQDGNSLSLFQEKIFYSFWPRVGGRSPDELSPENL
HHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
KIIGRLLARIHNVGQSQSFKHRITLNSKTYGTDPLENLLQGEWIPSSCKKEYLETTNQIL
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
DLFQENMKSVPFHRIHGDCHKGNLLFGKEGWFFVDFDDCLQGPAIQDFWMLLSKGKEGIE
HHHHHHHHCCCCHHHCCCCCCCCEEEECCCCEEEEHHHHHCCCCHHHHHHHHHHCCCCHH
EREYILSGYREFRDFDDRWFDLVEILRAMRFVHYSAWIANRFHSDPSFPTAFPHFSGTDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
WEKETLELKEQYNLIRNLSGKKSFFSVTESVSEDKELTNRDFFWDLED
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]