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The map label for this gene is yraR [H]

Identifier: 45657222

GI number: 45657222

Start: 1657098

End: 1657766

Strand: Direct

Name: yraR [H]

Synonym: LIC11344

Alternate gene names: 45657222

Gene position: 1657098-1657766 (Clockwise)

Preceding gene: 45657220

Following gene: 45657229

Centisome position: 38.74

GC content: 38.57

Gene sequence:

>669_bases
ATGTCTCAAAAAATCGCTTTGGTTGCGGGTGCAACTGGATTGATCGGAAAATGTCTTTTAGAAGAATTATCCCAATCCTC
TTACTATCAAAAAGTTTACGCTCTTGTTCGAAGACCTGGAAATATAACTGGAATCGAAGAAATCGTTTCCGATTATGAAT
CGTTAGTTGCTGCTTCTCTTCCTAAAGAAATTACAGATGTTTTTTGCTGTTTGGGAACTACGATTTCTAAAGCGGGAAGC
CAGGAGAATTTTAGAAAAGTAGATCACGAATACGTTTTAAAACTCGCAAAATTTACAAAAGAAAAAGGAGCTAGATCCTT
TCTCGTAGTCAGTGCCTTAGGCGCCGATCCAAAATCTTTTGTATTTTACAATCGAGTCAAAGGGGAAATGGAAAAAGATC
TGGAAAAGATCGGTTTTTCTTTTTTAGGAATTTTTAGACCTTCGTTACTCGAAGGAGAAAGGGAAGAGGTCCGTCCGGGC
GAGGTCGTTGGTCATCTTGTTGCAAAGATTGTAAATCCATTTCTTTGGGGAGGAATTCGAAAATATAGATCGATTCATGG
AAGAACGGTTGCAAAGGCGATGATTCAAATCGCAGAAAAAGAACCCAAAGGAATTAGAATTTTGGAATCGGATCGAATCG
CCGACTTTGGTCAGCTTTATAAAACCTAA

Upstream 100 bases:

>100_bases
TCAATTCTTTCCGGAAAGAAGGGTCGATTTTGAAAAAAATTCTTTCATAAAAAAAGAAGAGAAACATTCTTTTCTCAATC
TTTTTAGGAGAAATCGATAC

Downstream 100 bases:

>100_bases
AAGTAACAATCTTAAAATAAAATTTTTTCGTAAAATCGTTGTTCTACGATTACCAATAAAATTTTTTTATAGAGATTTTA
TTACATAAACTTACGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSQKIALVAGATGLIGKCLLEELSQSSYYQKVYALVRRPGNITGIEEIVSDYESLVAASLPKEITDVFCCLGTTISKAGS
QENFRKVDHEYVLKLAKFTKEKGARSFLVVSALGADPKSFVFYNRVKGEMEKDLEKIGFSFLGIFRPSLLEGEREEVRPG
EVVGHLVAKIVNPFLWGGIRKYRSIHGRTVAKAMIQIAEKEPKGIRILESDRIADFGQLYKT

Sequences:

>Translated_222_residues
MSQKIALVAGATGLIGKCLLEELSQSSYYQKVYALVRRPGNITGIEEIVSDYESLVAASLPKEITDVFCCLGTTISKAGS
QENFRKVDHEYVLKLAKFTKEKGARSFLVVSALGADPKSFVFYNRVKGEMEKDLEKIGFSFLGIFRPSLLEGEREEVRPG
EVVGHLVAKIVNPFLWGGIRKYRSIHGRTVAKAMIQIAEKEPKGIRILESDRIADFGQLYKT
>Mature_221_residues
SQKIALVAGATGLIGKCLLEELSQSSYYQKVYALVRRPGNITGIEEIVSDYESLVAASLPKEITDVFCCLGTTISKAGSQ
ENFRKVDHEYVLKLAKFTKEKGARSFLVVSALGADPKSFVFYNRVKGEMEKDLEKIGFSFLGIFRPSLLEGEREEVRPGE
VVGHLVAKIVNPFLWGGIRKYRSIHGRTVAKAMIQIAEKEPKGIRILESDRIADFGQLYKT

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=229, Percent_Identity=34.9344978165939, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI148728168, Length=229, Percent_Identity=34.9344978165939, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI148728164, Length=229, Percent_Identity=34.9344978165939, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI148728166, Length=229, Percent_Identity=34.9344978165939, Blast_Score=111, Evalue=5e-25,
Organism=Escherichia coli, GI87082218, Length=215, Percent_Identity=38.1395348837209, Blast_Score=117, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI71983631, Length=219, Percent_Identity=35.1598173515982, Blast_Score=125, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6320840, Length=209, Percent_Identity=31.5789473684211, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 24695; Mature: 24564

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKIALVAGATGLIGKCLLEELSQSSYYQKVYALVRRPGNITGIEEIVSDYESLVAASL
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
PKEITDVFCCLGTTISKAGSQENFRKVDHEYVLKLAKFTKEKGARSFLVVSALGADPKSF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
VFYNRVKGEMEKDLEKIGFSFLGIFRPSLLEGEREEVRPGEVVGHLVAKIVNPFLWGGIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
KYRSIHGRTVAKAMIQIAEKEPKGIRILESDRIADFGQLYKT
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHCC
>Mature Secondary Structure 
SQKIALVAGATGLIGKCLLEELSQSSYYQKVYALVRRPGNITGIEEIVSDYESLVAASL
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
PKEITDVFCCLGTTISKAGSQENFRKVDHEYVLKLAKFTKEKGARSFLVVSALGADPKSF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
VFYNRVKGEMEKDLEKIGFSFLGIFRPSLLEGEREEVRPGEVVGHLVAKIVNPFLWGGIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
KYRSIHGRTVAKAMIQIAEKEPKGIRILESDRIADFGQLYKT
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]