Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is flgI
Identifier: 45657207
GI number: 45657207
Start: 1637969
End: 1639069
Strand: Direct
Name: flgI
Synonym: LIC11327
Alternate gene names: 45657207
Gene position: 1637969-1639069 (Clockwise)
Preceding gene: 45657206
Following gene: 45657208
Centisome position: 38.3
GC content: 38.24
Gene sequence:
>1101_bases ATGAAATCTAAATATTCTATTTTTTGCATGTTTTTATTGAGGGGATTTATTTTTTTAGGAACTGTTTTCTCTTTAAACTC TGCTGAGCTTAGGTTGAAGGATATTGCAAGAATCGAAGGAGTTCGTGAAAATCAAATTACCGGCTACGGTATTGTGGTAG GTTTACCTGGAACGGGTGATAGTAAAACTCCTTTTACGTCTGAAAGTATGAAAAATTATTTAAAGAACTTGGGAGTAGAA GCCAATCTCAAACCGGATCAGACTAGAAACATTGCTTCTGTTTTAATTACGGCTACGATACCAACTTATTCCAGGAAAGG AGATAAATTAAACGTTGTAGTTTCTTCCATTGGAGATGCTAAGTCTTTGGAAGGTGGAGTTCTTTTACAGTCTCCTTTGA AAACTGCCGGAGATAAAACTTATGCGGTTGCTTCTGGAGTAATTTCGTTCGGAGGAAGACAAGAGCAAGAGCGTGGAAGT AGTTCTAGAGGAAATAAAAAAACGGTAGGAGTAGTTCACGGAGGGGCGATCGTCGAACAGGAGTTAGATCAGAATTTTTA TGCCTCTGAAAGAGTTCAGATACAACTTGAAAATCAAGACTTTACTACTTTAAACGCGATCGTTTCTAAAATCCGTTCTA TTCTTCCGGGAAAACACGGAATCGGACCCGAGTCTGTAGTTCCTATTTCTCCTTCCGAAATTAATATCGTTCTCGGAAAA AGTTTTGAAAATAAATCGGATGCGTTTTTAACTTTGTTAAGCGACATCGAAAATCTGACCGTGGAAACACAAACAAAACC TAAAGTAGTTATTAACGAAAGAACCGGAGTGATTGTGATGGGGGGTAATATTACGATCGAAGAAGTTGCGGTTTCTCGTT CTGGTTTGAATCTTTCCGTAACGGATAAAAATAGAAGACGTAATTGGCTCGGAAAAGAGCAAGAACCTACTAAAAGTTCT TTTTTAATCGAGGAATCTACAAGCGTAGGAGACGTAGTGGAAGCCTTAAACAAAGTAGGCGCTTCTACAAAAGACATTAT CGCTATTTTAGAAGCTCTAAAAAAATCGGGAGCGTTACACGCGGAATTGGAGATACAATGA
Upstream 100 bases:
>100_bases CCAATCCAGATGGTTCTGTTACCACCAAGGCGGAACTTTCTGAAGAAGAAAAACAAAGACTGATTCTGAACCAACTGAAC CGACTTTTGGGAGAATCACA
Downstream 100 bases:
>100_bases TGATTGATTCTATAAAAGATTATTCAAATAAACTAAATCTAATCGAAAAGCCGGAAGTAAAAAGCCTTTTAAACTTAGAA AAACAACATAAGAACAAGTC
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKSKYSIFCMFLLRGFIFLGTVFSLNSAELRLKDIARIEGVRENQITGYGIVVGLPGTGDSKTPFTSESMKNYLKNLGVE ANLKPDQTRNIASVLITATIPTYSRKGDKLNVVVSSIGDAKSLEGGVLLQSPLKTAGDKTYAVASGVISFGGRQEQERGS SSRGNKKTVGVVHGGAIVEQELDQNFYASERVQIQLENQDFTTLNAIVSKIRSILPGKHGIGPESVVPISPSEINIVLGK SFENKSDAFLTLLSDIENLTVETQTKPKVVINERTGVIVMGGNITIEEVAVSRSGLNLSVTDKNRRRNWLGKEQEPTKSS FLIEESTSVGDVVEALNKVGASTKDIIAILEALKKSGALHAELEIQ
Sequences:
>Translated_366_residues MKSKYSIFCMFLLRGFIFLGTVFSLNSAELRLKDIARIEGVRENQITGYGIVVGLPGTGDSKTPFTSESMKNYLKNLGVE ANLKPDQTRNIASVLITATIPTYSRKGDKLNVVVSSIGDAKSLEGGVLLQSPLKTAGDKTYAVASGVISFGGRQEQERGS SSRGNKKTVGVVHGGAIVEQELDQNFYASERVQIQLENQDFTTLNAIVSKIRSILPGKHGIGPESVVPISPSEINIVLGK SFENKSDAFLTLLSDIENLTVETQTKPKVVINERTGVIVMGGNITIEEVAVSRSGLNLSVTDKNRRRNWLGKEQEPTKSS FLIEESTSVGDVVEALNKVGASTKDIIAILEALKKSGALHAELEIQ >Mature_366_residues MKSKYSIFCMFLLRGFIFLGTVFSLNSAELRLKDIARIEGVRENQITGYGIVVGLPGTGDSKTPFTSESMKNYLKNLGVE ANLKPDQTRNIASVLITATIPTYSRKGDKLNVVVSSIGDAKSLEGGVLLQSPLKTAGDKTYAVASGVISFGGRQEQERGS SSRGNKKTVGVVHGGAIVEQELDQNFYASERVQIQLENQDFTTLNAIVSKIRSILPGKHGIGPESVVPISPSEINIVLGK SFENKSDAFLTLLSDIENLTVETQTKPKVVINERTGVIVMGGNITIEEVAVSRSGLNLSVTDKNRRRNWLGKEQEPTKSS FLIEESTSVGDVVEALNKVGASTKDIIAILEALKKSGALHAELEIQ
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family
Homologues:
Organism=Escherichia coli, GI1787320, Length=357, Percent_Identity=34.453781512605, Blast_Score=176, Evalue=2e-45,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGI_LEPIC (Q72SP8)
Other databases:
- EMBL: AE016823 - RefSeq: YP_001293.1 - GeneID: 2772225 - GenomeReviews: AE016823_GR - KEGG: lic:LIC11327 - HOGENOM: HBG321070 - OMA: NAVAQMN - ProtClustDB: PRK05303 - BioCyc: LINT267671:LIC_11327-MONOMER - HAMAP: MF_00416 - InterPro: IPR001782 - PRINTS: PR01010
Pfam domain/function: PF02119 FlgI
EC number: NA
Molecular weight: Translated: 39513; Mature: 39513
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKYSIFCMFLLRGFIFLGTVFSLNSAELRLKDIARIEGVRENQITGYGIVVGLPGTGD CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC SKTPFTSESMKNYLKNLGVEANLKPDQTRNIASVLITATIPTYSRKGDKLNVVVSSIGDA CCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCEEEEEEEECCCCCCCCCEEEEEEECCCCC KSLEGGVLLQSPLKTAGDKTYAVASGVISFGGRQEQERGSSSRGNKKTVGVVHGGAIVEQ CCCCCCEEEECCHHHCCCCEEEHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCHHHHH ELDQNFYASERVQIQLENQDFTTLNAIVSKIRSILPGKHGIGPESVVPISPSEINIVLGK HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEEEC SFENKSDAFLTLLSDIENLTVETQTKPKVVINERTGVIVMGGNITIEEVAVSRSGLNLSV CCCCCCHHHHHHHHHHHHCEEEECCCCEEEEECCCCEEEECCCEEEEEEEEECCCCEEEE TDKNRRRNWLGKEQEPTKSSFLIEESTSVGDVVEALNKVGASTKDIIAILEALKKSGALH ECCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEE AELEIQ EEEEEC >Mature Secondary Structure MKSKYSIFCMFLLRGFIFLGTVFSLNSAELRLKDIARIEGVRENQITGYGIVVGLPGTGD CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC SKTPFTSESMKNYLKNLGVEANLKPDQTRNIASVLITATIPTYSRKGDKLNVVVSSIGDA CCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCEEEEEEEECCCCCCCCCEEEEEEECCCCC KSLEGGVLLQSPLKTAGDKTYAVASGVISFGGRQEQERGSSSRGNKKTVGVVHGGAIVEQ CCCCCCEEEECCHHHCCCCEEEHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCHHHHH ELDQNFYASERVQIQLENQDFTTLNAIVSKIRSILPGKHGIGPESVVPISPSEINIVLGK HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEEEC SFENKSDAFLTLLSDIENLTVETQTKPKVVINERTGVIVMGGNITIEEVAVSRSGLNLSV CCCCCCHHHHHHHHHHHHCEEEECCCCEEEEECCCCEEEECCCEEEEEEEEECCCCEEEE TDKNRRRNWLGKEQEPTKSSFLIEESTSVGDVVEALNKVGASTKDIIAILEALKKSGALH ECCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEE AELEIQ EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA