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The map label for this gene is 45657172

Identifier: 45657172

GI number: 45657172

Start: 1593266

End: 1594375

Strand: Direct

Name: 45657172

Synonym: LIC11291

Alternate gene names: NA

Gene position: 1593266-1594375 (Clockwise)

Preceding gene: 45657171

Following gene: 45657173

Centisome position: 37.25

GC content: 28.92

Gene sequence:

>1110_bases
ATGGTTTTTGAAAAATTCAAACGTATTTACGCGCAAGAACCTTTTATCTTAAGGGTAAGGGCTCTATATCTGCTTCTTTT
TAATGTAGTAGTTTTTATGTTTGCGAGTTTATCGTTTACGTTTTTCTTTAATGAGAAAGAGCCTACTTACCGACCTAGTT
ATATACTCTTTATAATTGCTTCTTTTTTATCGATATTTTTGCTTTGGATAGGACAGTTTAAAAAAGCTTTGTTTCTAACT
TTATTTTCCGTGGCTACGGGACTTACGTGGGTTCTACTTTTTGGAAATCCGATCGGAAATGCTTTATGGAGTCTTTCCAT
TTTAGTGATCTTATTTTTATTATTCACTGATATTAGAACTACTCTTTATATTTCTTTATTTTCGTTTATATTGATTCTAT
TATTTTTTTATAGACTCAATTTGATGAATAAGTTAAACAGCGTTTTTGTACTAGATTCTATTATAGGTTTTATTCTTTTT
ACGCTCCTTGCTTTTTTAATTGTAAACCTTTTAAATTCTTATATTAAAGAAAAAGATGAATTAATCAAAGAAATTCATCA
TAGGGTTAGGAATAATCTTCAGGTATTAAGTGGTCTCGCCATTCTTCACAATAAAGACGATGCCGATTTACAAAGGGTGT
TATTTGAATTTCAAAATCGGATTCTTGCAATGTCAGAAGTACATAACTATTTGTATAAATCTGATAACTATCATAGTATA
GAATTTTCTAATGTAATTGAAAAAATTATAGAGAATCTTAAAAGTAAACATAAAGATTCTAAGATAACCATTCTAAATTA
TTCTGAAAAAATAAATCTGCCAATTGAAAAGGCAATTCCTTGTGCAATGATTTTTAATGAACTTCTGAATAACTCACTGA
TTCATGCATTTAAAGAATCTAAAAATCCAAATATAGAAATTCATTTTTCTAAAAACGTTTCCATTTATAAATTAGCCGTC
AAGGACAACGGAACGGGAATGGCAATTCCGGAGAATTGGAAAAATTCAAACACAATAGGTTTTACTTTAATTCAGATTCT
TTCTAGGCAGATTCATGCGAATTTCGAAATTTTTAACGATCGTGGTTTGGTCGCTGTTTTAGAATTTTGA

Upstream 100 bases:

>100_bases
TTTTGTCGAATTTAAAATGCTGCTTAATAGGATTTACTATCTTAGAATTATAAATGAATTTTTTAATAGAACAATTTAGG
AAGGATCTTTTTCAGAGAGT

Downstream 100 bases:

>100_bases
TTGATGCTTATAGATCTTTTAAAAATCTTACGGATCGAAAGTTAGAATATATTCGATTTAAGCGAATTTTGAAAAATGAT
TTCTGTATAACATCATAAAA

Product: histidine kinase sensor protein

Products: NA

Alternate protein names: Sensory Transduction Histidine Kinase; Two-Component Sensor Histidine Kinase; Histidine Kinase Sensor Protein; Sensor Histidine Kinase; Sensory Box Histidine Kinase; Histidine Kinase Family; Two-Component Hybrid Sensor And Regulator; Multisensor Signal Transduction Histidine Kinase; PAS Sensor Protein; Signal-Transducing Histidine Kinase; Sensory Transduction Regulatory Protein; Histidine Kinase Dimerisation/Phosphoacceptor; Two Component System Sensor Histidine Kinase; Two-Component System Sensor Histidine Kinase; Histidine Kinase/Response Regulator Hybrid Protein; Multi-Sensor Signal Transduction Histidine Kinase; Ethylene Response Sensor Protein; Response Regulator; Sensory Transduction Protein Kinase; Histidine Kinase Of A Two-Component Regulator System; PAS Fold Family; Two Component Sensor Histidine Kinase; Two-Component Sensor Protein; Multi-Sensor Signal Transduction Multi-Kinase; Two-Component Histidine Kinase; Sensor Histidine Kinase And Response Regulator Protein

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MVFEKFKRIYAQEPFILRVRALYLLLFNVVVFMFASLSFTFFFNEKEPTYRPSYILFIIASFLSIFLLWIGQFKKALFLT
LFSVATGLTWVLLFGNPIGNALWSLSILVILFLLFTDIRTTLYISLFSFILILLFFYRLNLMNKLNSVFVLDSIIGFILF
TLLAFLIVNLLNSYIKEKDELIKEIHHRVRNNLQVLSGLAILHNKDDADLQRVLFEFQNRILAMSEVHNYLYKSDNYHSI
EFSNVIEKIIENLKSKHKDSKITILNYSEKINLPIEKAIPCAMIFNELLNNSLIHAFKESKNPNIEIHFSKNVSIYKLAV
KDNGTGMAIPENWKNSNTIGFTLIQILSRQIHANFEIFNDRGLVAVLEF

Sequences:

>Translated_369_residues
MVFEKFKRIYAQEPFILRVRALYLLLFNVVVFMFASLSFTFFFNEKEPTYRPSYILFIIASFLSIFLLWIGQFKKALFLT
LFSVATGLTWVLLFGNPIGNALWSLSILVILFLLFTDIRTTLYISLFSFILILLFFYRLNLMNKLNSVFVLDSIIGFILF
TLLAFLIVNLLNSYIKEKDELIKEIHHRVRNNLQVLSGLAILHNKDDADLQRVLFEFQNRILAMSEVHNYLYKSDNYHSI
EFSNVIEKIIENLKSKHKDSKITILNYSEKINLPIEKAIPCAMIFNELLNNSLIHAFKESKNPNIEIHFSKNVSIYKLAV
KDNGTGMAIPENWKNSNTIGFTLIQILSRQIHANFEIFNDRGLVAVLEF
>Mature_369_residues
MVFEKFKRIYAQEPFILRVRALYLLLFNVVVFMFASLSFTFFFNEKEPTYRPSYILFIIASFLSIFLLWIGQFKKALFLT
LFSVATGLTWVLLFGNPIGNALWSLSILVILFLLFTDIRTTLYISLFSFILILLFFYRLNLMNKLNSVFVLDSIIGFILF
TLLAFLIVNLLNSYIKEKDELIKEIHHRVRNNLQVLSGLAILHNKDDADLQRVLFEFQNRILAMSEVHNYLYKSDNYHSI
EFSNVIEKIIENLKSKHKDSKITILNYSEKINLPIEKAIPCAMIFNELLNNSLIHAFKESKNPNIEIHFSKNVSIYKLAV
KDNGTGMAIPENWKNSNTIGFTLIQILSRQIHANFEIFNDRGLVAVLEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43000; Mature: 43000

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEECC
>Mature Secondary Structure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CCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA